Bra028039 (Brassica rapa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bra028039 T292637_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
anac016
M07172_2.00
Arabidopsis thaliana
DVCKTGNBNNNCAMG

CKTGNNNVNCAMGBH
Dap-seq
OMalley et al.(2016)
ANAC016_col_a
0.945 0.904
anac016
M07173_2.00
Arabidopsis thaliana
TVCKTGNBNNNCAMG

CKTGNNNVNCAMGBA
Dap-seq
OMalley et al.(2016)
ANAC016_colamp_a
0.945 0.904
NAC017
M07174_2.00
Arabidopsis thaliana
NCKTGNBNNNCAMGNWA

TWNCKTGNNNVNCAMGN
Dap-seq
OMalley et al.(2016)
ANAC017_colamp_v31
0.918 0.886
NAC017
M07175_2.00
Arabidopsis thaliana
NDNTTNCTTGBNNNNCAMG

CKTGNNNNVCAAGNAANHN
Dap-seq
OMalley et al.(2016)
ANAC017_col
0.918 0.886
NAC017
M11078_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AT1G34190_Q2
0.918 0.886
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra028039.1-P NAC/NAM 13 139

Links

Other NAC/NAM family TFs
Other Brassica rapa TFs

Invalid Input OrderBy

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action