Bra028640 (Brassica rapa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bra028640 T292641_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
anac103
M07243_2.00 		Arabidopsis thaliana
TDVCTTGNDNHNCAAGTTWYY
RRWAACTTGNDNHNCAAGBHA		 Dap-seq
OMalley et al.(2016)
ANAC103_col_a 		0.912 0.735
anac103
M07244_2.00 		Arabidopsis thaliana
TTGNDNHNCAAGYTWY
RWARCTTGNDNHNCAA		 Dap-seq
OMalley et al.(2016)
ANAC103_colamp_a 		0.912 0.735
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra028640.1-P NAC/NAM 7 133

Links

Other NAC/NAM family TFs
Other Brassica rapa TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo2g009300 Brassica oleracea Bo2g009300 I 0.959
Bra009379 Brassica rapa Bra009379 N 0.930
Cagra.1365s0106 Capsella grandiflora Cagra.1365s0106 N 0.928
Carubv10001139m.g Capsella rubella Carubv10001139m.g N 0.928
Thhalv10013785m.g Eutrema salsugineum Thhalv10013785m.g N 0.928
Bo3g005150 Brassica oleracea Bo3g005150 N 0.927
VNI1 Arabidopsis lyrata fgenesh2_kg.6__879__AT5G09330.2 N 0.921
NAC082 Arabidopsis thaliana AT5G09330 N 0.918
Bostr.13129s0062 Boechera stricta Bostr.13129s0062 N 0.913
anac103 Arabidopsis thaliana AT5G64060 D 0.912
anac103 Arabidopsis lyrata fgenesh2_kg.8__2417__AT5G64060.1 I 0.907
Bo9g174090 Brassica oleracea Bo9g174090 N 0.905
Thhalv10004501m.g Eutrema salsugineum Thhalv10004501m.g I 0.904
Bra006019 Brassica rapa Bra006019 N 0.901
Bra024263 Brassica rapa Bra024263 I 0.895
Bo3g101690 Brassica oleracea Bo3g101690 I 0.895
Carubv10026643m.g Capsella rubella Carubv10026643m.g I 0.880
Cagra.0248s0087 Capsella grandiflora Cagra.0248s0087 I 0.880
Bostr.0568s0398 Boechera stricta Bostr.0568s0398 I 0.879
cassava2514.valid.m1 Manihot esculenta cassava2514.valid.m1 I 0.873
cassava2515.valid.m1 Manihot esculenta cassava2515.valid.m1 I 0.873
cassava2513.valid.m1 Manihot esculenta cassava2513.valid.m1 I 0.873