CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra030820
(
Brassica rapa
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Bra030820
T292653_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra030820.1-P
NAC/NAM
19
146
PPGFRFHPKDDELVCDYLMARSLGHNTKQPPPLLLIQVDLNKCEPWDIPKTACVGGKDWYFYSQRDRKYATGLRTNRATATGYWKATGKDRAILRKGKLVGMRKTLVFYQGRAPRGRKTDWVMHEFRL
Links
Other
NAC/NAM
family TFs
Other
Brassica rapa
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo3g185760
Brassica oleracea
Bo3g185760
N
0.996
NAC1
Arabidopsis lyrata
Al_scaffold_0001_4992
N
0.992
NAC021
Arabidopsis thaliana
AT1G56010
N
0.989
Thhalv10011659m.g
Eutrema salsugineum
Thhalv10011659m.g
N
0.985
Cagra.6372s0006
Capsella grandiflora
Cagra.6372s0006
N
0.976
Carubv10011081m.g
Capsella rubella
Carubv10011081m.g
N
0.976
Ciclev10021117m.g
Citrus clementina
Ciclev10021117m.g
N
0.967
PGSC0003DMG400022134
Solanum tuberosum
PGSC0003DMG400022134
N
0.962
Bra034713
Brassica rapa
Bra034713
N
0.959
Thhalv10021297m.g
Eutrema salsugineum
Thhalv10021297m.g
N
0.958
Bo5g132990
Brassica oleracea
Bo5g132990
N
0.956
29650.m000275
Ricinus communis
29650.m000275
N
0.955
Cla023574
Citrullus lanatus
Cla023574
N
0.955
AT3G12977
Arabidopsis thaliana
AT3G12977
N
0.954
scaffold_301478.1
Arabidopsis lyrata
scaffold_301478.1
N
0.952
Eucgr.F01449
Eucalyptus grandis
Eucgr.F01449
N
0.946
GLYMA08G18470
Glycine max
GLYMA08G18470
N
0.946
Bra001480
Brassica rapa
Bra001480
N
0.942
Bo3g065240
Brassica oleracea
Bo3g065240
N
0.942
Sb10g027100
Sorghum bicolor
Sb10g027100
N
0.936
Bostr.3640s0073
Boechera stricta
Bostr.3640s0073
N
0.928
SapurV1A.0085s0410
Salix purpurea
SapurV1A.0085s0410
N
0.923
cassava27052.m1
Manihot esculenta
cassava27052.m1
I
0.922
PRUPE_ppa008801mg
Prunus persica
PRUPE_ppa008801mg
N
0.919
Sb07g005610
Sorghum bicolor
Sb07g005610
I
0.912
chr3.CM0279.430.nd
Lotus japonicus
chr3.CM0279.430.nd
N
0.912
Ca_13537
Cicer arietinum
Ca_13537
N
0.911
MDP0000298182
Malus domestica
MDP0000298182
N
0.908
GRMZM2G167018
Zea mays
GRMZM2G167018
I
0.908
gene10469-v1.0-hybrid
Fragaria vesca
gene10469-v1.0-hybrid
N
0.905
MTR_2g064470
Medicago truncatula
MTR_2g064470
N
0.905
SapurV1A.0284s0040
Salix purpurea
SapurV1A.0284s0040
N
0.900
GLYMA15G40510
Glycine max
GLYMA15G40510
N
0.900
PK23481.1
Cannabis sativa
PK23481.1
N
0.885
BRADI1G32660
Brachypodium distachyon
BRADI1G32660
I
0.885
OPUNC03G00610
Oryza punctata
OPUNC03G00610
N
0.883
TCM_032479
Theobroma cacao
TCM_032479
N
0.880
TRIUR3_29250
Triticum urartu
TRIUR3_29250
I
0.874
F775_30297
Aegilops tauschii
F775_30297
I
0.874
Traes_7DL_BDD45DB24
Triticum aestivum
Traes_7DL_BDD45DB24
I
0.874