Bra033296 (Brassica rapa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bra033296 T292663_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC69
M07216_2.00
Arabidopsis thaliana
WMCTTVTNNNNYAAG

CTTRNNNNABAAGKW
Dap-seq
OMalley et al.(2016)
NTM2_col_b
0.887 0.443
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra033296.1-P NAC/NAM 4 135

Links

Other NAC/NAM family TFs
Other Brassica rapa TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bo5g002860 Brassica oleracea Bo5g002860 N 0.988
Thhalv10007665m.g Eutrema salsugineum Thhalv10007665m.g I 0.970
Carubv10009049m.g Capsella rubella Carubv10009049m.g I 0.967
Cagra.1968s0045 Capsella grandiflora Cagra.1968s0045 I 0.967
ANAC001 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1000119 I 0.962
MTR_8g023860 Medicago truncatula MTR_8g023860 I 0.955
Bo5g002850 Brassica oleracea Bo5g002850 I 0.954
Ca_20988 Cicer arietinum Ca_20988 I 0.954
Carubv10009451m.g Capsella rubella Carubv10009451m.g I 0.953
Bostr.5325s0009 Boechera stricta Bostr.5325s0009 I 0.952
MTR_8g023930 Medicago truncatula MTR_8g023930 I 0.948
Bostr.5325s0019 Boechera stricta Bostr.5325s0019 I 0.948
Bo5g002830 Brassica oleracea Bo5g002830 N 0.944
Bo5g002810 Brassica oleracea Bo5g002810 I 0.937
MTR_8g023840 Medicago truncatula MTR_8g023840 I 0.935
Bostr.25375s0002 Boechera stricta Bostr.25375s0002 I 0.933
Bo9g004070 Brassica oleracea Bo9g004070 I 0.931
Gorai.006G203800 Gossypium raimondii Gorai.006G203800 I 0.930
TCM_015535 Theobroma cacao TCM_015535 I 0.930
Lus10015587.g Linum usitatissimum Lus10015587.g I 0.929
Lus10032919.g Linum usitatissimum Lus10032919.g I 0.929
Bra036328 Brassica rapa Bra036328 I 0.923
Aquca_009_00966 Aquilegia coerulea Aquca_009_00966 I 0.923
Pm028711 Prunus mume Pm028711 I 0.921
VIT_15s0048g02320 Vitis vinifera VIT_15s0048g02320 I 0.921
Bostr.5325s0011 Boechera stricta Bostr.5325s0011 I 0.918
Solyc06g073050.2 Solanum lycopersicum Solyc06g073050.2 N 0.916
Gorai.007G017500 Gossypium raimondii Gorai.007G017500 I 0.914
AMTR_s00018p00071850 Amborella trichopoda AMTR_s00018p00071850 I 0.913
Gorai.004G125900 Gossypium raimondii Gorai.004G125900 I 0.911
mgf022344m Mimulus guttatus mgf022344m I 0.909
Bra027596 Brassica rapa Bra027596 I 0.909
Solyc03g080090.2 Solanum lycopersicum Solyc03g080090.2 I 0.903
MDP0000282616 Malus domestica MDP0000282616 I 0.903
PRUPE_ppa022384mg Prunus persica PRUPE_ppa022384mg I 0.902
MTR_5g069030 Medicago truncatula MTR_5g069030 I 0.899
GRMZM2G003715 Zea mays GRMZM2G003715 I 0.898
PGSC0003DMG400000555 Solanum tuberosum PGSC0003DMG400000555 I 0.897
PRUPE_ppb017658mg Prunus persica PRUPE_ppb017658mg I 0.891
SapurV1A.0024s0340 Salix purpurea SapurV1A.0024s0340 I 0.891
Eucgr.I02571 Eucalyptus grandis Eucgr.I02571 N 0.891
Lus10005143.g Linum usitatissimum Lus10005143.g N 0.890
Lus10030175.g Linum usitatissimum Lus10030175.g N 0.890
Bostr.4825s0023 Boechera stricta Bostr.4825s0023 I 0.889
anac069 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002854 I 0.887
PRUPE_ppa016876mg Prunus persica PRUPE_ppa016876mg N 0.887
Pm028712 Prunus mume Pm028712 N 0.887
NAC69 Arabidopsis thaliana AT4G01550 D 0.887
VIT_15s0048g02300 Vitis vinifera VIT_15s0048g02300 N 0.886
POPTR_0002s15560 Populus trichocarpa POPTR_0002s15560 I 0.884
Si019916m.g Setaria italica Si019916m.g N 0.880
SapurV1A.0586s0170 Salix purpurea SapurV1A.0586s0170 I 0.875
POPTR_0002s18290 Populus trichocarpa POPTR_0002s18290 I 0.875
evm.TU.supercontig_3.170 Carica papaya evm.TU.supercontig_3.170 N 0.875
fgenesh1_pg.C_scaffold_3000386 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000386 I 0.874