Bra033298 (Brassica rapa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bra033298 T292665_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC004
M07161_2.00 		Arabidopsis thaliana
CTTVYNYNRYAAGY
RCTTRYNRNRBAAG		 Dap-seq
OMalley et al.(2016)
ANAC004_col_a 		0.901 0.713
NAC004
M07162_2.00 		Arabidopsis thaliana
WVCTTVYNBNRYAAGYWWBNN
NNVWWRCTTRYNVNRBAAGBW		 Dap-seq
OMalley et al.(2016)
ANAC004_colamp_a 		0.901 0.713
NAC001
M00969_2.00 		Arabidopsis thaliana
NYACGBHANN
NNTDVCGTRN		 PBM
Lindemose et al.(2014)
FL092 		0.888 0.509
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra033298.1-P NAC/NAM 4 128

Links

Other NAC/NAM family TFs
Other Brassica rapa TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo5g002880 Brassica oleracea Bo5g002880 I 0.993
Bostr.5325s0016 Boechera stricta Bostr.5325s0016 I 0.904
NAC004 Arabidopsis thaliana AT1G02230 D 0.901
ANAC004 Arabidopsis lyrata Al_scaffold_0001_137 I 0.893
NAC001 Arabidopsis thaliana AT1G01010 D 0.888
orange1.1g013027m.g Citrus sinensis orange1.1g013027m.g N 0.872