Bra035488 (Brassica rapa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bra035488 T292683_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANAC011
M07169_2.00 		Arabidopsis thaliana
RTTDCTTSNNHNDCAAGHWAY
RTWDCTTGHNDNNSAAGHAAY		 Dap-seq
OMalley et al.(2016)
ANAC011_col_a 		0.990 0.956
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra035488.1-P NAC/NAM 7 140

Links

Other NAC/NAM family TFs
Other Brassica rapa TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo8g028730 Brassica oleracea Bo8g028730 I 0.994
Bostr.3359s0109 Boechera stricta Bostr.3359s0109 I 0.992
Thhalv10009466m.g Eutrema salsugineum Thhalv10009466m.g I 0.992
ANAC011 Arabidopsis thaliana AT1G32510 D 0.990
ANAC011 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002601 I 0.987
Carubv10011108m.g Capsella rubella Carubv10011108m.g I 0.986
Cagra.7865s0013 Capsella grandiflora Cagra.7865s0013 I 0.985
Traes_5DL_B69423A67 Triticum aestivum Traes_5DL_B69423A67 I 0.944
Traes_5BL_8BE382FE3 Triticum aestivum Traes_5BL_8BE382FE3 I 0.944
MLOC_37843 Hordeum vulgare MLOC_37843 I 0.944
TRIUR3_13805 Triticum urartu TRIUR3_13805 I 0.944
LPERR09G14720 Leersia perrieri LPERR09G14720 I 0.941
Sb02g032230 Sorghum bicolor Sb02g032230 I 0.940
Thhalv10012158m.g Eutrema salsugineum Thhalv10012158m.g I 0.940
evm.TU.contig_29561 Carica papaya evm.TU.contig_29561 I 0.939
Pavir.J38855 Panicum virgatum Pavir.J38855 I 0.939
SapurV1A.0093s0260 Salix purpurea SapurV1A.0093s0260 I 0.938
BGIOSGA031230 Oryza indica BGIOSGA031230 I 0.938
OMERI09G14170 Oryza meridionalis OMERI09G14170 I 0.938
Eucgr.K02303 Eucalyptus grandis Eucgr.K02303 I 0.938
OGLUM09G19480 Oryza glumaepatula OGLUM09G19480 I 0.938
OB09G25590 Oryza brachyantha OB09G25590 I 0.938
ONIVA09G20130 Oryza nivara ONIVA09G20130 I 0.938
ORGLA09G0151800 Oryza glaberrima ORGLA09G0151800 I 0.938
Pavir.Bb02626 Panicum virgatum Pavir.Bb02626 I 0.937
Pavir.Ba01386 Panicum virgatum Pavir.Ba01386 I 0.937
PRUPE_ppa017765mg Prunus persica PRUPE_ppa017765mg I 0.937
Si032702m.g Setaria italica Si032702m.g I 0.937
BRADI4G37327 Brachypodium distachyon BRADI4G37327 I 0.933
F775_13961 Aegilops tauschii F775_13961 I 0.931
GSMUA_Achr11G16860_001 Musa acuminata GSMUA_Achr11G16860_001 I 0.900
OB01G20290 Oryza brachyantha OB01G20290 I 0.889
BRADI3G13630 Brachypodium distachyon BRADI3G13630 N 0.872
MTR_2g068920 Medicago truncatula MTR_2g068920 I 0.872
Ca_13571 Cicer arietinum Ca_13571 I 0.872
Cucsa.319840 Cucumis sativus Cucsa.319840 I 0.872
MTR_2g068880 Medicago truncatula MTR_2g068880 I 0.872