Bra036326 (Brassica rapa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bra036326 T292690_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC69
M07216_2.00
Arabidopsis thaliana
WMCTTVTNNNNYAAG

CTTRNNNNABAAGKW
Dap-seq
OMalley et al.(2016)
NTM2_col_b
0.962 0.774
NAC68
M07214_2.00
Arabidopsis thaliana
RCTTVYNBNNYAAGY

RCTTRNNVNRBAAGY
Dap-seq
OMalley et al.(2016)
NTM1_col_a
0.895 0.713
NAC68
M07215_2.00
Arabidopsis thaliana
HDYYRCTTTTTNNHYHYHNNN

NNNDRDRDNNAAAAAGYRRHD
Dap-seq
OMalley et al.(2016)
NTM1_colamp_a
0.895 0.713
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra036326.1-P NAC/NAM 5 133

Links

Other NAC/NAM family TFs
Other Brassica rapa TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
NAC68 Arabidopsis thaliana AT4G01540 D 0.895
NAC69 Arabidopsis thaliana AT4G01550 D 0.962
anac067 Arabidopsis thaliana AT4G01520 I 0.928
GSMUA_Achr1G03560_001 Musa acuminata GSMUA_Achr1G03560_001 I 0.896
MTR_8g023840 Medicago truncatula MTR_8g023840 I 0.910
Ca_20988 Cicer arietinum Ca_20988 I 0.887
Bostr.10064s0010 Boechera stricta Bostr.10064s0010 I 0.878
Bostr.25375s0002 Boechera stricta Bostr.25375s0002 I 0.883
Bostr.4825s0023 Boechera stricta Bostr.4825s0023 I 0.967
Bostr.5325s0009 Boechera stricta Bostr.5325s0009 I 0.921
Bostr.5325s0019 Boechera stricta Bostr.5325s0019 I 0.896
Cagra.12529s0001 Capsella grandiflora Cagra.12529s0001 I 0.877
Carubv10000489m.g Capsella rubella Carubv10000489m.g I 0.907
Carubv10003260m.g Capsella rubella Carubv10003260m.g I 0.971
MDP0000282616 Malus domestica MDP0000282616 I 0.900
MDP0000575835 Malus domestica MDP0000575835 I 0.879
anac069 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002854 I 0.962
ANAC001 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1000119 I 0.879
Bo00853s060 Brassica oleracea Bo00853s060 I 0.979
Bo5g002810 Brassica oleracea Bo5g002810 I 0.888
Bo5g002850 Brassica oleracea Bo5g002850 I 0.898
Bo6g119080 Brassica oleracea Bo6g119080 I 0.958
Bo9g004070 Brassica oleracea Bo9g004070 I 0.952
Bo9g004090 Brassica oleracea Bo9g004090 I 0.958
Bo9g004100 Brassica oleracea Bo9g004100 I 0.944
Bo9g004110 Brassica oleracea Bo9g004110 I 0.990
Bo9g061230 Brassica oleracea Bo9g061230 I 0.876
Bra036328 Brassica rapa Bra036328 I 0.953
Bra036327 Brassica rapa Bra036327 I 0.962
Thhalv10028684m.g Eutrema salsugineum Thhalv10028684m.g I 0.963
Bra027596 Brassica rapa Bra027596 I 0.872
Bra008553 Brassica rapa Bra008553 I 0.972
TCM_041332 Theobroma cacao TCM_041332 N 0.890
cassava16016.m1 Manihot esculenta cassava16016.m1 N 0.883
SapurV1A.0561s0300 Salix purpurea SapurV1A.0561s0300 N 0.877
POPTR_0009s16290 Populus trichocarpa POPTR_0009s16290 N 0.872