Bra036327 (Brassica rapa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bra036327 T292691_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC69
M07216_2.00
Arabidopsis thaliana
WMCTTVTNNNNYAAG

CTTRNNNNABAAGKW
Dap-seq
OMalley et al.(2016)
NTM2_col_b
0.955 0.722
NAC68
M07214_2.00
Arabidopsis thaliana
RCTTVYNBNNYAAGY

RCTTRNNVNRBAAGY
Dap-seq
OMalley et al.(2016)
NTM1_col_a
0.952 0.704
NAC68
M07215_2.00
Arabidopsis thaliana
HDYYRCTTTTTNNHYHYHNNN

NNNDRDRDNNAAAAAGYRRHD
Dap-seq
OMalley et al.(2016)
NTM1_colamp_a
0.952 0.704
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra036327.1-P NAC/NAM 5 136

Links

Other NAC/NAM family TFs
Other Brassica rapa TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CaO19.431 Candida albicans CaO19.431 N 0.000
CaO19.8061 Candida albicans CaO19.8061 N 0.000
CD36_05070 Candida dubliniensis CD36_05070 N 0.000
G210_1736 Candida maltosa G210_1736 N 0.000
CTRG_04538 Candida tropicalis CTRG_04538 N 0.000
HPODL_04995 Ogataea parapolymorpha HPODL_04995 N 0.000
JL09_g54 Pichia kudriavzevii JL09_g54 N 0.000
estExt_gwp_genewisePlus_worm.C_chr_1.10867 Pichia stipitis estExt_gwp_genewisePlus_worm.C_chr_1.10867 N 0.000