Bra037585 (Brassica rapa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bra037585 T292696_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
anac058
M00886_2.00 		Arabidopsis thaliana
CGTTGTCT
AGACAACG		 PBM
Franco-Zorrilla et al.(2014)
ANAC58 		0.956 0.965
anac058
M07210_2.00 		Arabidopsis thaliana
CKTGHNNNRCAMGYWA
TWRCKTGYNNNDCAMG		 Dap-seq
OMalley et al.(2016)
ANAC058_col_a 		0.956 0.965
anac058
M07211_2.00 		Arabidopsis thaliana
TDCKTGHNNNDCAMGHHA
TDDCKTGHNNNDCAMGHA		 Dap-seq
OMalley et al.(2016)
ANAC058_colamp_a 		0.956 0.965
ANAC038
M07188_2.00 		Arabidopsis thaliana
DNCKTRHNNHDCAMGYWA
TWRCKTGHDNNDYAMGNH		 Dap-seq
OMalley et al.(2016)
ANAC038_col_a 		0.885 0.772
ANAC038
M07189_2.00 		Arabidopsis thaliana
TTDCTTGWNNHDYAMGHHAHH
DDTDDCKTRHDNNWCAAGHAA		 Dap-seq
OMalley et al.(2016)
ANAC038_colamp_a 		0.885 0.772
NAC098
M07239_2.00 		Arabidopsis thaliana
CKTGTNNNDYAMGYHA
TDRCKTRHNNNACAMG		 Dap-seq
OMalley et al.(2016)
CUC2_colamp_a 		0.876 0.825
NAC098
M07240_2.00 		Arabidopsis thaliana
NNNTWNCKTGHNNHWCAMG
CKTGWDNNDCAMGNWANNN		 Dap-seq
OMalley et al.(2016)
CUC2_col 		0.876 0.825
e_gw1.288.15.1
M02381_2.00 		Physcomitrella patens
NNNBAMKNHW
WDNMKTVNNN		 PBM
Weirauch et al.(2014)
pTH8467 		0.871 0.746
e_gw1.159.34.1
M02379_2.00 		Physcomitrella patens
DYACGNHANN
NNTDNCGTRH		 PBM
Weirauch et al.(2014)
pTH8477 		0.871 0.754
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra037585.1-P NAC/NAM 6 130

Links

Other NAC/NAM family TFs
Other Brassica rapa TFs

204 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo1g117610 Brassica oleracea Bo1g117610 I 0.972
Ciclev10023578m.g Citrus clementina Ciclev10023578m.g I 0.958
cassava9086.m1 Manihot esculenta cassava9086.m1 I 0.958
POPTR_0015s03700 Populus trichocarpa POPTR_0015s03700 I 0.958
Thhalv10021200m.g Eutrema salsugineum Thhalv10021200m.g I 0.958
SapurV1A.1146s0010 Salix purpurea SapurV1A.1146s0010 I 0.957
29974.m000235 Ricinus communis 29974.m000235 I 0.956
anac058 Arabidopsis lyrata Al_scaffold_0003_1942 I 0.956
anac058 Arabidopsis thaliana AT3G18400 D 0.956
Gorai.006G060900 Gossypium raimondii Gorai.006G060900 I 0.956
Bostr.19424s0822 Boechera stricta Bostr.19424s0822 I 0.955
Bra022319 Brassica rapa Bra022319 I 0.954
SapurV1A.1381s0060 Salix purpurea SapurV1A.1381s0060 I 0.954
SapurV1A.1381s0050 Salix purpurea SapurV1A.1381s0050 I 0.954
Bra001705 Brassica rapa Bra001705 I 0.954
TCM_012350 Theobroma cacao TCM_012350 I 0.954
Bo3g071500 Brassica oleracea Bo3g071500 I 0.954
Bo01320s020 Brassica oleracea Bo01320s020 I 0.954
MDP0000153949 Malus domestica MDP0000153949 I 0.952
MDP0000246482 Malus domestica MDP0000246482 I 0.952
POPTR_0012s05280 Populus trichocarpa POPTR_0012s05280 I 0.952
SapurV1A.0719s0060 Salix purpurea SapurV1A.0719s0060 I 0.952
Bostr.26675s0262 Boechera stricta Bostr.26675s0262 I 0.951
Cagra.1681s0009 Capsella grandiflora Cagra.1681s0009 I 0.951
Eucgr.B00724 Eucalyptus grandis Eucgr.B00724 I 0.950
evm.TU.supercontig_3.509 Carica papaya evm.TU.supercontig_3.509 I 0.949
Carubv10015990m.g Capsella rubella Carubv10015990m.g I 0.946
Aquca_026_00305 Aquilegia coerulea Aquca_026_00305 I 0.945
Thhalv10011708m.g Eutrema salsugineum Thhalv10011708m.g I 0.944
cassava2919.m1 Manihot esculenta cassava2919.m1 I 0.943
OPUNC03G24220 Oryza punctata OPUNC03G24220 I 0.942
Si036535m.g Setaria italica Si036535m.g I 0.940
anac058 Vitis vinifera VIT_17s0000g03660 I 0.940
mgf021065m Mimulus guttatus mgf021065m I 0.937
Eucgr.K02225 Eucalyptus grandis Eucgr.K02225 I 0.937
Sb01g014310 Sorghum bicolor Sb01g014310 I 0.936
Pavir.Ib03976 Panicum virgatum Pavir.Ib03976 I 0.935
LPERR03G21900 Leersia perrieri LPERR03G21900 I 0.935
OGLUM03G27330 Oryza glumaepatula OGLUM03G27330 I 0.934
OBART03G26480 Oryza barthii OBART03G26480 I 0.934
Pavir.Ia01262 Panicum virgatum Pavir.Ia01262 I 0.934
OMERI03G23890 Oryza meridionalis OMERI03G23890 I 0.934
ORUFI03G27440 Oryza rufipogon ORUFI03G27440 I 0.934
BGIOSGA013151 Oryza indica BGIOSGA013151 I 0.934
OS03G0624600 Oryza sativa OS03G0624600 I 0.934
ONIVA03G27500 Oryza nivara ONIVA03G27500 I 0.934
ORGLA03G0246300 Oryza glaberrima ORGLA03G0246300 I 0.934
AMTR_s00079p00099620 Amborella trichopoda AMTR_s00079p00099620 I 0.933
OB03G34470 Oryza brachyantha OB03G34470 I 0.932
GSMUA_Achr8G18420_001 Musa acuminata GSMUA_Achr8G18420_001 I 0.931
GSMUA_Achr10G19900_001 Musa acuminata GSMUA_Achr10G19900_001 I 0.931
Traes_4BS_373BDBA94 Triticum aestivum Traes_4BS_373BDBA94 I 0.929
BRADI1G14467 Brachypodium distachyon BRADI1G14467 I 0.929
MLOC_68284 Hordeum vulgare MLOC_68284 I 0.929
TRIUR3_27612 Triticum urartu TRIUR3_27612 I 0.928
Traes_4AL_B44DF4ACC Triticum aestivum Traes_4AL_B44DF4ACC I 0.928
PGSC0003DMG400005384 Solanum tuberosum PGSC0003DMG400005384 I 0.928
F775_05949 Aegilops tauschii F775_05949 I 0.928
Lus10027227.g Linum usitatissimum Lus10027227.g I 0.926
chr1.LjT35C22.60.nc Lotus japonicus chr1.LjT35C22.60.nc I 0.923
PGSC0003DMG400028779 Solanum tuberosum PGSC0003DMG400028779 I 0.921
Solyc12g036480.1 Solanum lycopersicum Solyc12g036480.1 I 0.921
Lus10009029.g Linum usitatissimum Lus10009029.g I 0.921
cassava18338.valid.m1 Manihot esculenta cassava18338.valid.m1 I 0.920
TCM_036791 Theobroma cacao TCM_036791 I 0.920
orange1.1g037591m.g Citrus sinensis orange1.1g037591m.g I 0.920
Gorai.010G124100 Gossypium raimondii Gorai.010G124100 I 0.920
Ciclev10008885m.g Citrus clementina Ciclev10008885m.g I 0.920
SapurV1A.0346s0160 Salix purpurea SapurV1A.0346s0160 I 0.918
ANAC039 Vitis vinifera VIT_04s0008g02710 I 0.918
Bra003023 Brassica rapa Bra003023 I 0.918
Lus10009669.g Linum usitatissimum Lus10009669.g I 0.918
Lus10038937.g Linum usitatissimum Lus10038937.g I 0.918
PRUPE_ppa025916mg Prunus persica PRUPE_ppa025916mg I 0.917
Pm005091 Prunus mume Pm005091 I 0.917
MDP0000690168 Malus domestica MDP0000690168 I 0.917
MDP0000232008 Malus domestica MDP0000232008 I 0.917
SapurV1A.0263s0310 Salix purpurea SapurV1A.0263s0310 I 0.916
POPTR_0018s03910 Populus trichocarpa POPTR_0018s03910 I 0.915
SapurV1A.1363s0020 Salix purpurea SapurV1A.1363s0020 I 0.915
SapurV1A.1285s0100 Salix purpurea SapurV1A.1285s0100 I 0.915
POPTR_0015s02170 Populus trichocarpa POPTR_0015s02170 I 0.914
mgf025158m Mimulus guttatus mgf025158m I 0.914
GSMUA_Achr7G19680_001 Musa acuminata GSMUA_Achr7G19680_001 I 0.913
POPTR_0006s29180 Populus trichocarpa POPTR_0006s29180 I 0.913
MTR_3g109340 Medicago truncatula MTR_3g109340 I 0.912
Aquca_018_00116 Aquilegia coerulea Aquca_018_00116 I 0.911
GLYMA14G20276 Glycine max GLYMA14G20276 I 0.910
28226.m000851 Ricinus communis 28226.m000851 I 0.910
evm.TU.supercontig_244.7 Carica papaya evm.TU.supercontig_244.7 I 0.910
Solyc06g069100.1 Solanum lycopersicum Solyc06g069100.1 I 0.909
Eucgr.C02105 Eucalyptus grandis Eucgr.C02105 I 0.909
Cla019391 Citrullus lanatus Cla019391 I 0.908
SapurV1A.0377s0130 Salix purpurea SapurV1A.0377s0130 I 0.908
POPTR_0012s01610 Populus trichocarpa POPTR_0012s01610 I 0.908
Cucsa.197830 Cucumis sativus Cucsa.197830 I 0.907
Bo4g154590 Brassica oleracea Bo4g154590 I 0.906
gene08765-v1.0-hybrid Fragaria vesca gene08765-v1.0-hybrid I 0.906
PK02366.1 Cannabis sativa PK02366.1 I 0.906
PRUPE_ppa007839mg Prunus persica PRUPE_ppa007839mg I 0.905
cassava17517.valid.m1 Manihot esculenta cassava17517.valid.m1 I 0.904
30138.m004055 Ricinus communis 30138.m004055 I 0.904
SELMODRAFT_71303 Selaginella moellendorffii SELMODRAFT_71303 I 0.900
SELMODRAFT_67245 Selaginella moellendorffii SELMODRAFT_67245 I 0.900
MTR_4g108760 Medicago truncatula MTR_4g108760 I 0.900
Cla022572 Citrullus lanatus Cla022572 I 0.899
Cucsa.161510 Cucumis sativus Cucsa.161510 I 0.899
GLYMA06G08440 Glycine max GLYMA06G08440 I 0.899
Lus10020165.g Linum usitatissimum Lus10020165.g I 0.898
Lus10021659.g Linum usitatissimum Lus10021659.g I 0.898
Lus10001648.g Linum usitatissimum Lus10001648.g I 0.898
GLYMA04G08320 Glycine max GLYMA04G08320 I 0.897
gene26043-v1.0-hybrid Fragaria vesca gene26043-v1.0-hybrid I 0.893
Lus10026966.g Linum usitatissimum Lus10026966.g I 0.892
PGSC0003DMG400014845 Solanum tuberosum PGSC0003DMG400014845 I 0.891
Thhalv10000520m.g Eutrema salsugineum Thhalv10000520m.g I 0.891
cassava44869.m1 Manihot esculenta cassava44869.m1 I 0.890
Ciclev10020480m.g Citrus clementina Ciclev10020480m.g I 0.890
orange1.1g017827m.g Citrus sinensis orange1.1g017827m.g I 0.890
Pm011397 Prunus mume Pm011397 I 0.890
PGSC0003DMG400019523 Solanum tuberosum PGSC0003DMG400019523 I 0.890
MDP0000310981 Malus domestica MDP0000310981 I 0.890
PRUPE_ppa026810mg Prunus persica PRUPE_ppa026810mg I 0.890
mgf021404m Mimulus guttatus mgf021404m I 0.890
GSMUA_Achr10G22350_001 Musa acuminata GSMUA_Achr10G22350_001 I 0.889
GRMZM2G386163 Zea mays GRMZM2G386163 I 0.888
Solyc07g062840.2 Solanum lycopersicum Solyc07g062840.2 I 0.887
Solyc06g069710.2 Solanum lycopersicum Solyc06g069710.2 I 0.887
PGSC0003DMG400033047 Solanum tuberosum PGSC0003DMG400033047 I 0.887
gene25163-v1.0-hybrid Fragaria vesca gene25163-v1.0-hybrid I 0.887
Solyc03g115850.2 Solanum lycopersicum Solyc03g115850.2 I 0.886
Bostr.27895s0039 Boechera stricta Bostr.27895s0039 I 0.885
ANAC039 Arabidopsis lyrata fgenesh1_pg.C_scaffold_4000352 I 0.885
Bra007855 Brassica rapa Bra007855 I 0.885
Cagra.4091s0015 Capsella grandiflora Cagra.4091s0015 I 0.885
Bo8g099810 Brassica oleracea Bo8g099810 I 0.885
Carubv10025508m.g Capsella rubella Carubv10025508m.g I 0.885
ANAC038 Arabidopsis thaliana AT2G24430 D 0.885
Bra032095 Brassica rapa Bra032095 I 0.885
cassava46147.m1 Manihot esculenta cassava46147.m1 I 0.884
AMTR_s00025p00174590 Amborella trichopoda AMTR_s00025p00174590 I 0.883
AMTR_s00058p00136280 Amborella trichopoda AMTR_s00058p00136280 I 0.883
TCM_031619 Theobroma cacao TCM_031619 I 0.883
Gorai.013G171300 Gossypium raimondii Gorai.013G171300 I 0.883
Gorai.002G067300 Gossypium raimondii Gorai.002G067300 I 0.883
evm.TU.supercontig_131.88 Carica papaya evm.TU.supercontig_131.88 I 0.883
27950.m000105 Ricinus communis 27950.m000105 I 0.883
ORUFI09G16430 Oryza rufipogon ORUFI09G16430 I 0.882
OGLUM09G15820 Oryza glumaepatula OGLUM09G15820 I 0.882
OLONG_009674 Oryza longistaminata OLONG_009674 I 0.882
OMERI07G04410 Oryza meridionalis OMERI07G04410 I 0.882
ONIVA09G15800 Oryza nivara ONIVA09G15800 I 0.882
OBART09G15220 Oryza barthii OBART09G15220 I 0.882
OS09G0497900 Oryza sativa OS09G0497900 I 0.882
BGIOSGA029508 Oryza indica BGIOSGA029508 I 0.882
LPERR09G11330 Leersia perrieri LPERR09G11330 I 0.882
Pavir.J02772 Panicum virgatum Pavir.J02772 I 0.882
Si030187m.g Setaria italica Si030187m.g I 0.882
chr4.CM0087.800.nd Lotus japonicus chr4.CM0087.800.nd I 0.882
Sb02g028870 Sorghum bicolor Sb02g028870 I 0.882
ORGLA09G0117400 Oryza glaberrima ORGLA09G0117400 I 0.882
gene04424-v1.0-hybrid Fragaria vesca gene04424-v1.0-hybrid I 0.882
OPUNC09G13640 Oryza punctata OPUNC09G13640 I 0.882
Thhalv10013863m.g Eutrema salsugineum Thhalv10013863m.g I 0.881
Bo9g113820 Brassica oleracea Bo9g113820 I 0.881
Lus10005537.g Linum usitatissimum Lus10005537.g I 0.880
Lus10041924.g Linum usitatissimum Lus10041924.g I 0.880
MDP0000135860 Malus domestica MDP0000135860 I 0.879
Ciclev10008619m.g Citrus clementina Ciclev10008619m.g I 0.879
MTR_2g078700 Medicago truncatula MTR_2g078700 I 0.879
orange1.1g047710m.g Citrus sinensis orange1.1g047710m.g I 0.879
SapurV1A.2059s0010 Salix purpurea SapurV1A.2059s0010 I 0.878
GSMUA_Achr8G21470_001 Musa acuminata GSMUA_Achr8G21470_001 I 0.878
POPTR_0011s11600 Populus trichocarpa POPTR_0011s11600 I 0.878
SapurV1A.1325s0010 Salix purpurea SapurV1A.1325s0010 I 0.878
AMTR_s00010p00266320 Amborella trichopoda AMTR_s00010p00266320 I 0.877
LPERR06G12840 Leersia perrieri LPERR06G12840 I 0.876
GLYMA06G35660 Glycine max GLYMA06G35660 I 0.876
chr3.CM0282.730.nc Lotus japonicus chr3.CM0282.730.nc I 0.876
CUC2 Arabidopsis lyrata Al_scaffold_0008_1815 I 0.876
Carubv10028330m.g Capsella rubella Carubv10028330m.g I 0.876
MTR_3g435150 Medicago truncatula MTR_3g435150 I 0.876
Bostr.26833s0880 Boechera stricta Bostr.26833s0880 I 0.876
NAC098 Arabidopsis thaliana AT5G53950 D 0.876
Cagra.4622s0005 Capsella grandiflora Cagra.4622s0005 I 0.876
GLYMA12G26190 Glycine max GLYMA12G26190 I 0.876
OS06G0344900 Oryza sativa OS06G0344900 I 0.875
OLONG_019251 Oryza longistaminata OLONG_019251 I 0.875
OGLUM06G14810 Oryza glumaepatula OGLUM06G14810 I 0.875
OBART06G13940 Oryza barthii OBART06G13940 I 0.875
BGIOSGA022861 Oryza indica BGIOSGA022861 I 0.875
ORUFI06G14810 Oryza rufipogon ORUFI06G14810 I 0.875
ONIVA03G33370 Oryza nivara ONIVA03G33370 I 0.875
ORGLA06G0124600 Oryza glaberrima ORGLA06G0124600 I 0.875
OB06G22100 Oryza brachyantha OB06G22100 I 0.875
OPUNC06G13130 Oryza punctata OPUNC06G13130 I 0.875
Ca_22532 Cicer arietinum Ca_22532 I 0.875
F775_52293 Aegilops tauschii F775_52293 I 0.874
MLOC_68185 Hordeum vulgare MLOC_68185 I 0.874
TRIUR3_20591 Triticum urartu TRIUR3_20591 I 0.874
MTR_1g008740 Medicago truncatula MTR_1g008740 I 0.872
Cucsa.122890 Cucumis sativus Cucsa.122890 I 0.871
e_gw1.159.34.1 Physcomitrella patens e_gw1.159.34.1 D 0.871
e_gw1.288.15.1 Physcomitrella patens e_gw1.288.15.1 D 0.871