anac005 (Arabidopsis lyrata)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 fgenesh1_pg.C_scaffold_1000123 T292925_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC004
M07161_2.00 		Arabidopsis thaliana
CTTVYNYNRYAAGY
RCTTRYNRNRBAAG		 Dap-seq
OMalley et al.(2016)
ANAC004_col_a 		0.984 0.750
NAC004
M07162_2.00 		Arabidopsis thaliana
WVCTTVYNBNRYAAGYWWBNN
NNVWWRCTTRYNVNRBAAGBW		 Dap-seq
OMalley et al.(2016)
ANAC004_colamp_a 		0.984 0.750
NAC005
M07163_2.00 		Arabidopsis thaliana
WWNCTTVYNHHNYAAGTWW
WWACTTRNDDNRBAAGNWW		 Dap-seq
OMalley et al.(2016)
ANAC005_col_a 		0.972 0.732
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_1000123 NAC/NAM 4 132

Links

Other NAC/NAM family TFs
Other Arabidopsis lyrata TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.5325s0016 Boechera stricta Bostr.5325s0016 I 0.986
ANAC004 Arabidopsis lyrata Al_scaffold_0001_137 I 0.984
NAC004 Arabidopsis thaliana AT1G02230 D 0.984
Bo5g002950 Brassica oleracea Bo5g002950 I 0.974
Bostr.8819s0187 Boechera stricta Bostr.8819s0187 I 0.973
Bra033306 Brassica rapa Bra033306 I 0.973
NAC005 Arabidopsis thaliana AT1G02250 D 0.972
Bra033303 Brassica rapa Bra033303 I 0.964
Bra033308 Brassica rapa Bra033308 I 0.958
Bostr.5325s0006 Boechera stricta Bostr.5325s0006 I 0.957
Bra033300 Brassica rapa Bra033300 I 0.944
anac048 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1000114 I 0.942
Bo5g002910 Brassica oleracea Bo5g002910 I 0.940
Bra032615 Brassica rapa Bra032615 I 0.928
anac048 Arabidopsis thaliana AT3G04420 I 0.921
Cagra.1968s0041 Capsella grandiflora Cagra.1968s0041 I 0.921
Bostr.5325s0017 Boechera stricta Bostr.5325s0017 I 0.914
Carubv10009390m.g Capsella rubella Carubv10009390m.g I 0.908
Bo5g002880 Brassica oleracea Bo5g002880 I 0.901
Bo8g117560 Brassica oleracea Bo8g117560 I 0.895