fgenesh1_pg.C_scaffold_3000386 (Arabidopsis lyrata)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 fgenesh1_pg.C_scaffold_3000386 T292929_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC69
M07216_2.00
Arabidopsis thaliana
WMCTTVTNNNNYAAG

CTTRNNNNABAAGKW
Dap-seq
OMalley et al.(2016)
NTM2_col_b
0.932 0.496
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_3000386 NAC/NAM 4 134

Links

Other NAC/NAM family TFs
Other Arabidopsis lyrata TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bostr.25375s0002 Boechera stricta Bostr.25375s0002 I 0.970
Bo9g004070 Brassica oleracea Bo9g004070 I 0.956
Bra036328 Brassica rapa Bra036328 I 0.954
Bra027596 Brassica rapa Bra027596 I 0.948
Bostr.4825s0023 Boechera stricta Bostr.4825s0023 I 0.933
anac069 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002854 I 0.932
NAC69 Arabidopsis thaliana AT4G01550 D 0.932
Thhalv10028684m.g Eutrema salsugineum Thhalv10028684m.g I 0.921
mgf015836m Mimulus guttatus mgf015836m I 0.915
Carubv10003260m.g Capsella rubella Carubv10003260m.g I 0.914
Bo5g002850 Brassica oleracea Bo5g002850 I 0.913
F775_13961 Aegilops tauschii F775_13961 I 0.911
Bostr.5325s0009 Boechera stricta Bostr.5325s0009 I 0.909
GSMUA_AchrUn_randomG04060_001 Musa acuminata GSMUA_AchrUn_randomG04060_001 I 0.907
ORUFI08G03870 Oryza rufipogon ORUFI08G03870 I 0.907
OS08G0157900 Oryza sativa OS08G0157900 I 0.907
ONIVA08G03440 Oryza nivara ONIVA08G03440 I 0.907
BGIOSGA027623 Oryza indica BGIOSGA027623 I 0.907
Bra008553 Brassica rapa Bra008553 I 0.905
Carubv10000489m.g Capsella rubella Carubv10000489m.g I 0.904
Bo5g002810 Brassica oleracea Bo5g002810 I 0.903
Bostr.10064s0010 Boechera stricta Bostr.10064s0010 I 0.902
MDP0000282616 Malus domestica MDP0000282616 I 0.898
Traes_7AL_669D4AE47 Triticum aestivum Traes_7AL_669D4AE47 I 0.896
F775_30082 Aegilops tauschii F775_30082 I 0.896
Traes_7DL_AB67A0B36 Triticum aestivum Traes_7DL_AB67A0B36 I 0.896
TRIUR3_32613 Triticum urartu TRIUR3_32613 I 0.896
Traes_7BL_0C386426A Triticum aestivum Traes_7BL_0C386426A I 0.896
MLOC_50406 Hordeum vulgare MLOC_50406 I 0.896
Bo00853s060 Brassica oleracea Bo00853s060 I 0.895
Pavir.Fb00405 Panicum virgatum Pavir.Fb00405 I 0.894
OB08G13730 Oryza brachyantha OB08G13730 I 0.894
OLONG_000105 Oryza longistaminata OLONG_000105 I 0.893
OGLUM08G03540 Oryza glumaepatula OGLUM08G03540 I 0.893
OBART08G03460 Oryza barthii OBART08G03460 I 0.893
OPUNC08G03310 Oryza punctata OPUNC08G03310 I 0.893
Thhalv10007665m.g Eutrema salsugineum Thhalv10007665m.g I 0.893
OMERI08G03500 Oryza meridionalis OMERI08G03500 I 0.893
ORGLA08G0029000 Oryza glaberrima ORGLA08G0029000 I 0.893
LPERR08G03510 Leersia perrieri LPERR08G03510 I 0.893
mgf022344m Mimulus guttatus mgf022344m I 0.892
BRADI3G16480 Brachypodium distachyon BRADI3G16480 I 0.891
AMTR_s00018p00071850 Amborella trichopoda AMTR_s00018p00071850 I 0.891
Cagra.27691s0001 Capsella grandiflora Cagra.27691s0001 I 0.891
Bo9g004090 Brassica oleracea Bo9g004090 I 0.890
Bo6g119080 Brassica oleracea Bo6g119080 I 0.890
Si013369m.g Setaria italica Si013369m.g I 0.889
Pavir.Fa01901 Panicum virgatum Pavir.Fa01901 I 0.888
Bostr.5325s0019 Boechera stricta Bostr.5325s0019 I 0.887
Sb07g003900 Sorghum bicolor Sb07g003900 I 0.887
Cagra.1968s0045 Capsella grandiflora Cagra.1968s0045 I 0.887
Carubv10009049m.g Capsella rubella Carubv10009049m.g I 0.887
Bostr.5325s0011 Boechera stricta Bostr.5325s0011 I 0.885
SapurV1A.0586s0170 Salix purpurea SapurV1A.0586s0170 I 0.881
Carubv10009451m.g Capsella rubella Carubv10009451m.g I 0.880
GSMUA_Achr3G00330_001 Musa acuminata GSMUA_Achr3G00330_001 I 0.879
Cagra.12529s0001 Capsella grandiflora Cagra.12529s0001 I 0.879
PRUPE_ppa022384mg Prunus persica PRUPE_ppa022384mg I 0.877
Pm028711 Prunus mume Pm028711 I 0.876
PRUPE_ppb017658mg Prunus persica PRUPE_ppb017658mg I 0.876
Pm028712 Prunus mume Pm028712 N 0.874
Bra033296 Brassica rapa Bra033296 I 0.874
MTR_8g023840 Medicago truncatula MTR_8g023840 I 0.872
MLOC_37843 Hordeum vulgare MLOC_37843 I 0.872
Traes_5DL_B69423A67 Triticum aestivum Traes_5DL_B69423A67 I 0.872
TRIUR3_13805 Triticum urartu TRIUR3_13805 I 0.872
Traes_5BL_8BE382FE3 Triticum aestivum Traes_5BL_8BE382FE3 I 0.872
cassava29774.valid.m1 Manihot esculenta cassava29774.valid.m1 I 0.871
cassava29775.valid.m1 Manihot esculenta cassava29775.valid.m1 I 0.871
PRUPE_ppa016876mg Prunus persica PRUPE_ppa016876mg N 0.871