GSMUA_Achr6G25380_001 (Musa acuminata)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 GSMUA_Achr6G25380_001 T293421_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC002
M00970_2.00
Arabidopsis thaliana
NBACGYAWMN

NKWTRCGTVN
PBM
Lindemose et al.(2014)
ATAF1
0.928 0.807
NAC002
M07159_2.00
Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND

HNRWDDNMDWDWNNNWYACGBM
Dap-seq
OMalley et al.(2016)
ATAF1_col_a
0.928 0.807
NAC002
M07160_2.00
Arabidopsis thaliana
YACGY

RCGTR
Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a
0.928 0.807
NAC025
M02368_2.00
Arabidopsis thaliana
YACGYAAY

RTTRCGTR
PBM
Weirauch et al.(2014)
pTH7656
0.913 0.675
NAC48
M11084_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC6_01
0.907 0.816
NAC018
M07176_2.00
Arabidopsis thaliana
DYACGBMAYYD

HRRTKVCGTRH
Dap-seq
OMalley et al.(2016)
NAM_colamp_a
0.900 0.728
NAC018
M07177_2.00
Arabidopsis thaliana
WDNCKWNHNNNWYACGBMA

TKVCGTRWNNNDNWMGNHW
Dap-seq
OMalley et al.(2016)
NAM_col_v3a
0.900 0.728
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr6P25380_001 NAC/NAM 9 132

Links

Other NAC/NAM family TFs
Other Musa acuminata TFs

Invalid Input OrderBy

382 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action