CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr9G27530_001
(
Musa acuminata
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
GSMUA_Achr9G27530_001
T293474_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC079
M02373_2.00
Arabidopsis thaliana
TTGCGTRY
RYACGCAA
PBM
Weirauch et al.(2014)
pTH7399
0.893
0.842
NAC079
M07228_2.00
Arabidopsis thaliana
CBWNHNNHACACGYWA
TWRCGTGTDNNDNWVG
Dap-seq
OMalley et al.(2016)
ANAC079_colamp_a
0.893
0.842
NAC079
M07229_2.00
Arabidopsis thaliana
NTWNCKTVHNNHWCAMGYWAH
DTWRCKTGWDNNDBAMGNWAN
Dap-seq
OMalley et al.(2016)
ANAC079_col
0.893
0.842
ANAC080
M02376_2.00
Arabidopsis lyrata
NBAMKNHWNN
NNWDNMKTVN
PBM
Weirauch et al.(2014)
pTH9230
0.893
0.842
NAC59
M11080_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANAC059_01
0.892
0.833
NAC100
M02375_2.00
Arabidopsis thaliana
NBAMKNHWNN
NNWDNMKTVN
PBM
Weirauch et al.(2014)
pTH7239
0.887
0.833
ANAC100
M02377_2.00
Arabidopsis lyrata
DYACGYHANN
NNTDRCGTRH
PBM
Weirauch et al.(2014)
pTH9234
0.885
0.833
NAC92
M00979_2.00
Arabidopsis thaliana
NNDYACGBHA
TDVCGTRHNN
PBM
Lindemose et al.(2014)
ANAC092
0.883
0.833
NAC92
M00730_2.00
Arabidopsis thaliana
DYACGNHAN
NTDNCGTRH
PBM
Chang et al.(2013)
pTH7335
0.883
0.833
NAC92
M07234_2.00
Arabidopsis thaliana
TWNCKTGHNNHDCAMGYWAY
RTWRCKTGHDNNDCAMGNWA
Dap-seq
OMalley et al.(2016)
ANAC092_colamp_a
0.883
0.833
NAC92
M07235_2.00
Arabidopsis thaliana
WRCKTGTNNNDCAMG
CKTGHNNNACAMGYW
Dap-seq
OMalley et al.(2016)
ANAC092_col_v3a
0.883
0.833
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr9P27530_001
NAC/NAM
21
145
PPGFRFQPTDEELITHYLAKKVTDAGFHAVAIGEVDLNKHEPWDLPCKANMGEKEWYFFCVRDRKYPTGLRTNRATKAGYWKATGKDTAIYKGKSLVGMKKTLVFYRGRAPKGEKSDWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Musa acuminata
TFs
53 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy