CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LPERR05G13140
(
Leersia perrieri
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
LPERR05G13140
T293554_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC48
M11084_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC6_01
0.974
0.579
NAC002
M00970_2.00
Arabidopsis thaliana
NBACGYAWMN
NKWTRCGTVN
PBM
Lindemose et al.(2014)
ATAF1
0.965
0.561
NAC002
M07159_2.00
Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND
HNRWDDNMDWDWNNNWYACGBM
Dap-seq
OMalley et al.(2016)
ATAF1_col_a
0.965
0.561
NAC002
M07160_2.00
Arabidopsis thaliana
YACGY
RCGTR
Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a
0.965
0.561
AT3G12910
M07204_2.00
Arabidopsis thaliana
YGSCGKNDNDDHNMCGB
VCGKNDHHNHNMCGSCR
Dap-seq
OMalley et al.(2016)
AT3G12910_col_a
0.881
0.447
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LPERR05G13140.1
NAC/NAM
11
138
PTGFRFQPTDEELAVNYLQRRTVGQLSPIPIIADVDIYSFNPWELPSMALLGEHEWYFFTPRDHRYPNSVRPNHSAPSGFWRAIGTDKPIQVGGVQDAPIATRKSLVFYIGRTPMEIKTTWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Leersia perrieri
TFs
148 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORGLA05G0143100
Oryza glaberrima
ORGLA05G0143100
I
0.988
ONIVA05G17220
Oryza nivara
ONIVA05G17220
I
0.988
OGLUM05G17550
Oryza glumaepatula
OGLUM05G17550
I
0.988
OBART05G16540
Oryza barthii
OBART05G16540
I
0.988
ORUFI05G17750
Oryza rufipogon
ORUFI05G17750
I
0.988
OPUNC05G14600
Oryza punctata
OPUNC05G14600
I
0.988
OS05G0415400
Oryza sativa
OS05G0415400
I
0.988
BGIOSGA018048
Oryza indica
BGIOSGA018048
I
0.988
OMERI05G14410
Oryza meridionalis
OMERI05G14410
I
0.982
mgf004020m
Mimulus guttatus
mgf004020m
I
0.980
OGLUM01G43820
Oryza glumaepatula
OGLUM01G43820
I
0.974
OMERI01G36460
Oryza meridionalis
OMERI01G36460
I
0.974
Si002413m.g
Setaria italica
Si002413m.g
I
0.974
OB01G48340
Oryza brachyantha
OB01G48340
I
0.974
LPERR01G34090
Leersia perrieri
LPERR01G34090
I
0.974
LPERR05G13490
Leersia perrieri
LPERR05G13490
I
0.974
OBART01G39590
Oryza barthii
OBART01G39590
I
0.974
Sb03g041920
Sorghum bicolor
Sb03g041920
I
0.974
ORGLA01G0334900
Oryza glaberrima
ORGLA01G0334900
I
0.974
ORGLA05G0146600
Oryza glaberrima
ORGLA05G0146600
I
0.974
ORUFI01G42940
Oryza rufipogon
ORUFI01G42940
I
0.974
GSMUA_Achr6G18720_001
Musa acuminata
GSMUA_Achr6G18720_001
I
0.974
OPUNC01G38300
Oryza punctata
OPUNC01G38300
I
0.974
NAC48
Oryza sativa
OS01G0884300
D
0.974
ONIVA05G17670
Oryza nivara
ONIVA05G17670
I
0.974
ONIVA01G44460
Oryza nivara
ONIVA01G44460
I
0.974
OGLUM05G17980
Oryza glumaepatula
OGLUM05G17980
I
0.974
BGIOSGA019897
Oryza indica
BGIOSGA019897
I
0.974
GRMZM2G014653
Zea mays
GRMZM2G014653
I
0.974
BRADI2G57100
Brachypodium distachyon
BRADI2G57100
I
0.974
BGIOSGA000374
Oryza indica
BGIOSGA000374
I
0.974
OB05G24820
Oryza brachyantha
OB05G24820
I
0.973
F775_28813
Aegilops tauschii
F775_28813
I
0.973
TRAES3BF002300010CFD_g
Triticum aestivum
TRAES3BF002300010CFD_g
I
0.973
TRIUR3_14109
Triticum urartu
TRIUR3_14109
I
0.973
MLOC_59162
Hordeum vulgare
MLOC_59162
I
0.970
Pavir.Ba03301
Panicum virgatum
Pavir.Ba03301
I
0.968
Pavir.Bb00806
Panicum virgatum
Pavir.Bb00806
I
0.967
Si030752m.g
Setaria italica
Si030752m.g
I
0.967
anac032
Vitis vinifera
VIT_18s0001g02300
I
0.967
GLYMA14G24220
Glycine max
GLYMA14G24220
I
0.966
cassava28909.valid.m1
Manihot esculenta
cassava28909.valid.m1
I
0.966
TCM_035160
Theobroma cacao
TCM_035160
I
0.965
Pavir.Ib01528
Panicum virgatum
Pavir.Ib01528
I
0.965
Gorai.005G088800
Gossypium raimondii
Gorai.005G088800
I
0.965
Bo5g001100
Brassica oleracea
Bo5g001100
I
0.965
Bra033239
Brassica rapa
Bra033239
I
0.965
Bostr.5325s0094
Boechera stricta
Bostr.5325s0094
I
0.965
NAC002
Arabidopsis thaliana
AT1G01720
D
0.965
SapurV1A.3767s0010
Salix purpurea
SapurV1A.3767s0010
I
0.965
Cagra.1968s0112
Capsella grandiflora
Cagra.1968s0112
I
0.965
Pavir.Ea03621
Panicum virgatum
Pavir.Ea03621
I
0.965
Carubv10009926m.g
Capsella rubella
Carubv10009926m.g
I
0.965
Gorai.010G051900
Gossypium raimondii
Gorai.010G051900
I
0.965
Si036303m.g
Setaria italica
Si036303m.g
I
0.964
PK26157.1
Cannabis sativa
PK26157.1
I
0.964
SapurV1A.0740s0040
Salix purpurea
SapurV1A.0740s0040
I
0.964
SapurV1A.0365s0200
Salix purpurea
SapurV1A.0365s0200
I
0.964
e_gw1.5.134.1
Physcomitrella patens
e_gw1.5.134.1
I
0.963
Pavir.Ia03443
Panicum virgatum
Pavir.Ia03443
I
0.963
e_gw1.164.26.1
Physcomitrella patens
e_gw1.164.26.1
I
0.963
e_gw1.117.35.1
Physcomitrella patens
e_gw1.117.35.1
I
0.963
ATAF1
Arabidopsis lyrata
scaffold_100066.1
I
0.962
POPTR_0005s07060
Populus trichocarpa
POPTR_0005s07060
I
0.962
SapurV1A.0311s0230
Salix purpurea
SapurV1A.0311s0230
I
0.962
e_gw1.259.4.1
Physcomitrella patens
e_gw1.259.4.1
I
0.962
SapurV1A.2021s0010
Salix purpurea
SapurV1A.2021s0010
I
0.961
Pavir.J04049
Panicum virgatum
Pavir.J04049
I
0.961
ORUFI05G18190
Oryza rufipogon
ORUFI05G18190
I
0.960
Solyc11g017470.1
Solanum lycopersicum
Solyc11g017470.1
I
0.960
LPERR07G06440
Leersia perrieri
LPERR07G06440
I
0.959
POPTR_0007s04780
Populus trichocarpa
POPTR_0007s04780
I
0.959
SapurV1A.0039s0530
Salix purpurea
SapurV1A.0039s0530
I
0.958
GSMUA_Achr4G02390_001
Musa acuminata
GSMUA_Achr4G02390_001
I
0.957
GRMZM2G079632
Zea mays
GRMZM2G079632
I
0.957
Sb02g006680
Sorghum bicolor
Sb02g006680
I
0.956
GRMZM2G162739
Zea mays
GRMZM2G162739
I
0.956
mgf013201m
Mimulus guttatus
mgf013201m
I
0.956
VIT_06s0004g00020
Vitis vinifera
VIT_06s0004g00020
I
0.956
e_gw1.140.53.1
Physcomitrella patens
e_gw1.140.53.1
I
0.956
GLYMA05G32850
Glycine max
GLYMA05G32850
I
0.955
GSMUA_Achr7G21780_001
Musa acuminata
GSMUA_Achr7G21780_001
I
0.953
MTR_8g094580
Medicago truncatula
MTR_8g094580
I
0.953
e_gw1.164.18.1
Physcomitrella patens
e_gw1.164.18.1
I
0.950
Aquca_014_00255
Aquilegia coerulea
Aquca_014_00255
I
0.948
mgf002183m
Mimulus guttatus
mgf002183m
I
0.946
Solyc04g009440.2
Solanum lycopersicum
Solyc04g009440.2
I
0.945
Gorai.006G088400
Gossypium raimondii
Gorai.006G088400
I
0.941
GSMUA_Achr7G23250_001
Musa acuminata
GSMUA_Achr7G23250_001
I
0.938
TCM_029796
Theobroma cacao
TCM_029796
I
0.934
POPTR_0004s04920
Populus trichocarpa
POPTR_0004s04920
I
0.933
LPERR12G01440
Leersia perrieri
LPERR12G01440
I
0.933
Sb08g014060
Sorghum bicolor
Sb08g014060
I
0.927
LPERR11G01300
Leersia perrieri
LPERR11G01300
I
0.927
BRADI2G03467
Brachypodium distachyon
BRADI2G03467
I
0.927
BRADI1G32660
Brachypodium distachyon
BRADI1G32660
I
0.923
Sb03g000330
Sorghum bicolor
Sb03g000330
I
0.920
GRMZM2G083347
Zea mays
GRMZM2G083347
I
0.920
OPUNC12G10470
Oryza punctata
OPUNC12G10470
I
0.919
BRADI4G07527
Brachypodium distachyon
BRADI4G07527
I
0.914
Pavir.Cb00769
Panicum virgatum
Pavir.Cb00769
I
0.914
Pavir.Ca02208
Panicum virgatum
Pavir.Ca02208
I
0.914
Si022924m.g
Setaria italica
Si022924m.g
I
0.913
OS12G0477400
Oryza sativa
OS12G0477400
I
0.912
ONIVA12G11920
Oryza nivara
ONIVA12G11920
I
0.912
OMERI12G08420
Oryza meridionalis
OMERI12G08420
I
0.912
BGIOSGA037382
Oryza indica
BGIOSGA037382
I
0.912
ORUFI10G07040
Oryza rufipogon
ORUFI10G07040
I
0.912
OGLUM12G13410
Oryza glumaepatula
OGLUM12G13410
I
0.911
F775_23543
Aegilops tauschii
F775_23543
I
0.910
TRAES3BF100600040CFD_g
Triticum aestivum
TRAES3BF100600040CFD_g
I
0.910
Lus10003848.g
Linum usitatissimum
Lus10003848.g
I
0.909
SapurV1A.0093s0260
Salix purpurea
SapurV1A.0093s0260
I
0.908
AMTR_s00017p00255350
Amborella trichopoda
AMTR_s00017p00255350
I
0.907
GSMUA_Achr9G10040_001
Musa acuminata
GSMUA_Achr9G10040_001
I
0.903
cassava4505.m1
Manihot esculenta
cassava4505.m1
I
0.902
Si004195m.g
Setaria italica
Si004195m.g
I
0.900
GRMZM2G063522
Zea mays
GRMZM2G063522
I
0.897
Pavir.J36955
Panicum virgatum
Pavir.J36955
I
0.896
Lus10015389.g
Linum usitatissimum
Lus10015389.g
I
0.896
Pavir.Ea00010
Panicum virgatum
Pavir.Ea00010
I
0.896
Ca_00111
Cicer arietinum
Ca_00111
I
0.896
Bra034719
Brassica rapa
Bra034719
I
0.896
mgf019285m
Mimulus guttatus
mgf019285m
I
0.893
LPERR12G09780
Leersia perrieri
LPERR12G09780
I
0.893
GSMUA_Achr10G08120_001
Musa acuminata
GSMUA_Achr10G08120_001
I
0.886
Pavir.Ga00022
Panicum virgatum
Pavir.Ga00022
I
0.883
Cla011742
Citrullus lanatus
Cla011742
I
0.883
NAC026
Arabidopsis thaliana
AT1G62700
I
0.882
Thhalv10023502m.g
Eutrema salsugineum
Thhalv10023502m.g
I
0.882
fgenesh1_pg.scaffold_182000024
Physcomitrella patens
fgenesh1_pg.scaffold_182000024
I
0.882
gw1.1.690.1
Physcomitrella patens
gw1.1.690.1
I
0.882
AT3G12910
Arabidopsis thaliana
AT3G12910
D
0.881
fgenesh2_kg.3__1353__AT3G12910.1
Arabidopsis lyrata
fgenesh2_kg.3__1353__AT3G12910.1
I
0.880
Thhalv10021225m.g
Eutrema salsugineum
Thhalv10021225m.g
I
0.880
Bra039353
Brassica rapa
Bra039353
I
0.879
Bo1g138800
Brassica oleracea
Bo1g138800
I
0.879
LPERR09G11150
Leersia perrieri
LPERR09G11150
N
0.879
gw1.6.394.1
Physcomitrella patens
gw1.6.394.1
I
0.878
GSMUA_Achr6G31580_001
Musa acuminata
GSMUA_Achr6G31580_001
I
0.878
GSMUA_Achr4G32010_001
Musa acuminata
GSMUA_Achr4G32010_001
I
0.878
OPUNC04G28220
Oryza punctata
OPUNC04G28220
I
0.878
Gorai.010G236700
Gossypium raimondii
Gorai.010G236700
I
0.878
BRADI4G34022
Brachypodium distachyon
BRADI4G34022
I
0.877
Pavir.Gb00488
Panicum virgatum
Pavir.Gb00488
N
0.877
SELMODRAFT_86855
Selaginella moellendorffii
SELMODRAFT_86855
I
0.876
SELMODRAFT_71307
Selaginella moellendorffii
SELMODRAFT_71307
I
0.876
SapurV1A.0869s0210
Salix purpurea
SapurV1A.0869s0210
I
0.875