MLOC_59162 (Hordeum vulgare)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 MLOC_59162 T293691_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC48
M11084_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC6_01
0.996 0.947
NAC002
M00970_2.00
Arabidopsis thaliana
NBACGYAWMN

NKWTRCGTVN
PBM
Lindemose et al.(2014)
ATAF1
0.993 0.877
NAC002
M07159_2.00
Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND

HNRWDDNMDWDWNNNWYACGBM
Dap-seq
OMalley et al.(2016)
ATAF1_col_a
0.993 0.877
NAC002
M07160_2.00
Arabidopsis thaliana
YACGY

RCGTR
Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a
0.993 0.877
AT3G12910
M07204_2.00
Arabidopsis thaliana
YGSCGKNDNDDHNMCGB

VCGKNDHHNHNMCGSCR
Dap-seq
OMalley et al.(2016)
AT3G12910_col_a
0.930 0.535
NAC101
M07241_2.00
Arabidopsis thaliana
TGCKTVNDNHNYAMG

CKTRNDNHNBAMGCA
Dap-seq
OMalley et al.(2016)
VND6_colamp_a
0.876 0.553
NAC101
M07242_2.00
Arabidopsis thaliana
TTGCKTVHDNNNYAMGYHWHN

NDWDRCKTRNNNHDBAMGCAA
Dap-seq
OMalley et al.(2016)
VND6_col_v31
0.876 0.553
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_59162.1 NAC/NAM 10 133
MLOC_59162.2 NAC/NAM 10 133

Links

Other NAC/NAM family TFs
Other Hordeum vulgare TFs

Invalid Input OrderBy

409 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action