CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MLOC_61270
(
Hordeum vulgare
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
MLOC_61270
T293696_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC002
M00970_2.00
Arabidopsis thaliana
NBACGYAWMN
NKWTRCGTVN
PBM
Lindemose et al.(2014)
ATAF1
0.897
0.763
NAC002
M07159_2.00
Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND
HNRWDDNMDWDWNNNWYACGBM
Dap-seq
OMalley et al.(2016)
ATAF1_col_a
0.897
0.763
NAC002
M07160_2.00
Arabidopsis thaliana
YACGY
RCGTR
Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a
0.897
0.763
NAC48
M11084_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC6_01
0.888
0.781
NAC025
M02368_2.00
Arabidopsis thaliana
YACGYAAY
RTTRCGTR
PBM
Weirauch et al.(2014)
pTH7656
0.879
0.640
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MLOC_61270.1
NAC/NAM
12
138
PPGFRFHPTDEELVMYYLCRKCGGLPIAAPVIAEVDLYKLEPWRLPEKAAGGGQDSKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPVGSPRPVAIKKALVFYAGKPPKGVKTNWIMHEYRL
MLOC_61270.2
NAC/NAM
12
138
PPGFRFHPTDEELVMYYLCRKCGGLPIAAPVIAEVDLYKLEPWRLPEKAAGGGQDSKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPVGSPRPVAIKKALVFYAGKPPKGVKTNWIMHEYRL
MLOC_61270.3
NAC/NAM
12
138
PPGFRFHPTDEELVMYYLCRKCGGLPIAAPVIAEVDLYKLEPWRLPEKAAGGGQDSKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPVGSPRPVAIKKALVFYAGKPPKGVKTNWIMHEYRL
MLOC_61270.4
NAC/NAM
12
138
PPGFRFHPTDEELVMYYLCRKCGGLPIAAPVIAEVDLYKLEPWRLPEKAAGGGQDSKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPVGSPRPVAIKKALVFYAGKPPKGVKTNWIMHEYRL
MLOC_61270.5
NAC/NAM
12
138
PPGFRFHPTDEELVMYYLCRKCGGLPIAAPVIAEVDLYKLEPWRLPEKAAGGGQDSKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPVGSPRPVAIKKALVFYAGKPPKGVKTNWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Hordeum vulgare
TFs
271 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy