CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
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MLOC_72553
(
Hordeum vulgare
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
MLOC_72553
T293720_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MLOC_72553.1
NAC/NAM
55
223
PAGVKFDPTDQELIEHLEAKVRSGGTSAVAAPSHPLIDEFIPTIEGEDGICYTHPEKLPGVSKDGLSRHFFHRPSKAYTTGTRKRRKIQPPATVDASALSSAGSAAAGAGHHQQQQQRSETRWHKTGKTRPVAVGGRQRGCKKILVLYTNFGKHRKPEKTNWVMHQYHL
MLOC_72553.2
NAC/NAM
55
223
PAGVKFDPTDQELIEHLEAKVRSGGTSAVAAPSHPLIDEFIPTIEGEDGICYTHPEKLPGVSKDGLSRHFFHRPSKAYTTGTRKRRKIQPPATVDASALSSAGSAAAGAGHHQQQQQRSETRWHKTGKTRPVAVGGRQRGCKKILVLYTNFGKHRKPEKTNWVMHQYHL
Links
Other
NAC/NAM
family TFs
Other
Hordeum vulgare
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G115721
Zea mays
GRMZM2G115721
N
0.996
Pavir.Da00789
Panicum virgatum
Pavir.Da00789
N
0.996
Si006435m.g
Setaria italica
Si006435m.g
N
0.996
Pavir.Db01277
Panicum virgatum
Pavir.Db01277
N
0.996
Sb10g022130
Sorghum bicolor
Sb10g022130
N
0.995
Lus10012927.g
Linum usitatissimum
Lus10012927.g
N
0.994
mgf019352m
Mimulus guttatus
mgf019352m
N
0.994
Lus10034999.g
Linum usitatissimum
Lus10034999.g
N
0.994
Bo9g126190
Brassica oleracea
Bo9g126190
N
0.992
Bra002802
Brassica rapa
Bra002802
N
0.992
Cla000384
Citrullus lanatus
Cla000384
N
0.991
Cucsa.087480
Cucumis sativus
Cucsa.087480
N
0.990
Traes_7DL_1913741A8
Triticum aestivum
Traes_7DL_1913741A8
N
0.989
Traes_7AL_EFD897AFC
Triticum aestivum
Traes_7AL_EFD897AFC
N
0.989
GRMZM2G179049
Zea mays
GRMZM2G179049
N
0.925
Sb03g031000
Sorghum bicolor
Sb03g031000
N
0.923
Pavir.J23083
Panicum virgatum
Pavir.J23083
N
0.923
Pavir.J11699
Panicum virgatum
Pavir.J11699
N
0.923
BRADI4G34800
Brachypodium distachyon
BRADI4G34800
N
0.920
GRMZM2G054277
Zea mays
GRMZM2G054277
N
0.919
Si030942m.g
Setaria italica
Si030942m.g
N
0.912
LPERR09G12100
Leersia perrieri
LPERR09G12100
N
0.911
OMERI09G11810
Oryza meridionalis
OMERI09G11810
N
0.904
OBART09G15890
Oryza barthii
OBART09G15890
N
0.904
OGLUM09G16460
Oryza glumaepatula
OGLUM09G16460
N
0.904
ONIVA09G17010
Oryza nivara
ONIVA09G17010
N
0.904
ORGLA09G0123200
Oryza glaberrima
ORGLA09G0123200
N
0.904
BGIOSGA031062
Oryza indica
BGIOSGA031062
N
0.904
ORUFI09G17170
Oryza rufipogon
ORUFI09G17170
N
0.901
OS09G0509100
Oryza sativa
OS09G0509100
N
0.901
OB06G26080
Oryza brachyantha
OB06G26080
N
0.899
Pavir.J04931
Panicum virgatum
Pavir.J04931
N
0.887
Si014408m.g
Setaria italica
Si014408m.g
N
0.886
OPUNC09G14320
Oryza punctata
OPUNC09G14320
N
0.878
GRMZM2G100583
Zea mays
GRMZM2G100583
N
0.877
Aquca_003_00875
Aquilegia coerulea
Aquca_003_00875
N
0.874
OMERI07G09680
Oryza meridionalis
OMERI07G09680
N
0.874