CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MLOC_75524
(
Hordeum vulgare
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
MLOC_75524
T293724_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
OS06G0131700
M02378_2.00
Oryza sativa
NNNNHMDNND
HNNHKDNNNN
PBM
Weirauch et al.(2014)
pTH8356
0.875
0.877
NAC066
M00978_2.00
Arabidopsis thaliana
NBNNHNBNNN
NNNVNDNNVN
PBM
Lindemose et al.(2014)
NST2
0.873
0.842
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MLOC_75524.1
NAC/NAM
47
176
PPGFRFHPTEEELLTYYLAKKVASQRIDLDVIPDVDLNKLEPWDIQECCRIGTGPQNDWYLFSHKDKKYPTGTRTNRATTVGFWKATGRDKAIYPAAGYGHIGMRKTLVFYQGRAPHGHKSDWIMHEYRL
MLOC_75524.2
NAC/NAM
47
176
PPGFRFHPTEEELLTYYLAKKVASQRIDLDVIPDVDLNKLEPWDIQECCRIGTGPQNDWYLFSHKDKKYPTGTRTNRATTVGFWKATGRDKAIYPAAGYGHIGMRKTLVFYQGRAPHGHKSDWIMHEYRL
MLOC_75524.3
NAC/NAM
62
191
PPGFRFHPTEEELLTYYLAKKVASQRIDLDVIPDVDLNKLEPWDIQECCRIGTGPQNDWYLFSHKDKKYPTGTRTNRATTVGFWKATGRDKAIYPAAGYGHIGMRKTLVFYQGRAPHGHKSDWIMHEYRL
MLOC_75524.4
NAC/NAM
62
191
PPGFRFHPTEEELLTYYLAKKVASQRIDLDVIPDVDLNKLEPWDIQECCRIGTGPQNDWYLFSHKDKKYPTGTRTNRATTVGFWKATGRDKAIYPAAGYGHIGMRKTLVFYQGRAPHGHKSDWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Hordeum vulgare
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy