CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_7g085260
(
Medicago truncatula
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
MTR_7g085260
T293806_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANAC087
M07232_2.00
Arabidopsis thaliana
TDNCKTSHNNNDYACGYHANB
VNTDRCGTRHNNNDSAMGNHA
Dap-seq
OMalley et al.(2016)
ANAC087_colamp_a
0.911
0.860
ANAC087
M07233_2.00
Arabidopsis thaliana
TWNCKTGWNNNDCAMGYHA
TDRCKTGHNNNWCAMGNWA
Dap-seq
OMalley et al.(2016)
ANAC087_col_v3a
0.911
0.860
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AES80816
NAC/NAM
18
146
PPGFRFHPTDAEIIVCYLTEKVKNSKFSATAIGEADLNKCEPWDLPKKAKMGEKEWYFFCQKDRKYPTGMRTNRATESGYWKATGKDKEIYHKGKGIQNLVGMKKTLVFYKGRAPKGEKTNWVMHEFRL
Links
Other
NAC/NAM
family TFs
Other
Medicago truncatula
TFs
105 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
chr1.CM0104.260.nc
Lotus japonicus
chr1.CM0104.260.nc
I
0.941
Ca_08255
Cicer arietinum
Ca_08255
I
0.940
GLYMA16G04720
Glycine max
GLYMA16G04720
I
0.938
GLYMA19G28515
Glycine max
GLYMA19G28515
I
0.936
PRUPE_ppa005770mg
Prunus persica
PRUPE_ppa005770mg
I
0.933
SapurV1A.0308s0280
Salix purpurea
SapurV1A.0308s0280
I
0.929
Pm025307
Prunus mume
Pm025307
I
0.929
SapurV1A.2283s0010
Salix purpurea
SapurV1A.2283s0010
I
0.929
MDP0000184069
Malus domestica
MDP0000184069
I
0.924
Eucgr.A02074
Eucalyptus grandis
Eucgr.A02074
I
0.922
GLYMA02G07760
Glycine max
GLYMA02G07760
I
0.920
Gorai.007G267700
Gossypium raimondii
Gorai.007G267700
I
0.920
GLYMA16G26810
Glycine max
GLYMA16G26810
I
0.920
TCM_026028
Theobroma cacao
TCM_026028
I
0.920
Ca_19144
Cicer arietinum
Ca_19144
I
0.917
29950.m001171
Ricinus communis
29950.m001171
I
0.917
POPTR_0019s04710
Populus trichocarpa
POPTR_0019s04710
I
0.917
MTR_6g032770
Medicago truncatula
MTR_6g032770
I
0.914
evm.TU.supercontig_594.1
Carica papaya
evm.TU.supercontig_594.1
I
0.913
cassava25877.m1
Manihot esculenta
cassava25877.m1
I
0.911
ANAC087
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_6001462
I
0.911
ANAC087
Arabidopsis thaliana
AT5G18270
D
0.911
Carubv10001373m.g
Capsella rubella
Carubv10001373m.g
I
0.910
Cagra.0906s0022
Capsella grandiflora
Cagra.0906s0022
I
0.910
Bostr.26527s0381
Boechera stricta
Bostr.26527s0381
I
0.909
Thhalv10014060m.g
Eutrema salsugineum
Thhalv10014060m.g
I
0.908
Ciclev10020549m.g
Citrus clementina
Ciclev10020549m.g
I
0.907
orange1.1g016542m.g
Citrus sinensis
orange1.1g016542m.g
I
0.907
Bo3g013050
Brassica oleracea
Bo3g013050
I
0.906
Bra006449
Brassica rapa
Bra006449
I
0.906
Bo2g015440
Brassica oleracea
Bo2g015440
I
0.906
Bra023669
Brassica rapa
Bra023669
I
0.906
VIT_08s0007g07640
Vitis vinifera
VIT_08s0007g07640
I
0.905
cassava35698.valid.m1
Manihot esculenta
cassava35698.valid.m1
I
0.904
TRIUR3_25136
Triticum urartu
TRIUR3_25136
I
0.903
F775_29497
Aegilops tauschii
F775_29497
I
0.903
Traes_7DS_2452C1E32
Triticum aestivum
Traes_7DS_2452C1E32
I
0.903
POPTR_0013s05110
Populus trichocarpa
POPTR_0013s05110
I
0.903
Traes_7AS_7A7A0CF5B
Triticum aestivum
Traes_7AS_7A7A0CF5B
I
0.903
Aquca_014_00944
Aquilegia coerulea
Aquca_014_00944
I
0.902
Traes_7BS_BA1111780
Triticum aestivum
Traes_7BS_BA1111780
N
0.901
Gorai.013G118000
Gossypium raimondii
Gorai.013G118000
I
0.897
gene20686-v1.0-hybrid
Fragaria vesca
gene20686-v1.0-hybrid
I
0.896
Cla012339
Citrullus lanatus
Cla012339
I
0.896
GSMUA_Achr3G09520_001
Musa acuminata
GSMUA_Achr3G09520_001
I
0.895
GSMUA_Achr5G07600_001
Musa acuminata
GSMUA_Achr5G07600_001
I
0.895
SapurV1A.1196s0010
Salix purpurea
SapurV1A.1196s0010
I
0.894
SapurV1A.0867s0130
Salix purpurea
SapurV1A.0867s0130
I
0.894
TRIUR3_23644
Triticum urartu
TRIUR3_23644
I
0.893
MLOC_72737
Hordeum vulgare
MLOC_72737
I
0.893
Cucsa.002980
Cucumis sativus
Cucsa.002980
I
0.891
TRAES3BF020100120CFD_g
Triticum aestivum
TRAES3BF020100120CFD_g
I
0.890
GSMUA_Achr7G18330_001
Musa acuminata
GSMUA_Achr7G18330_001
I
0.890
Sb03g008860
Sorghum bicolor
Sb03g008860
N
0.889
Traes_5AL_373E730BB
Triticum aestivum
Traes_5AL_373E730BB
I
0.888
Eucgr.K01472
Eucalyptus grandis
Eucgr.K01472
I
0.888
Traes_3AS_4220612F3
Triticum aestivum
Traes_3AS_4220612F3
I
0.887
VIT_14s0108g01070
Vitis vinifera
VIT_14s0108g01070
I
0.887
MDP0000232050
Malus domestica
MDP0000232050
I
0.886
MDP0000129335
Malus domestica
MDP0000129335
I
0.886
Pavir.Ba02955
Panicum virgatum
Pavir.Ba02955
I
0.886
Pavir.Bb02033
Panicum virgatum
Pavir.Bb02033
I
0.885
F775_16032
Aegilops tauschii
F775_16032
I
0.884
PRUPE_ppa007883mg
Prunus persica
PRUPE_ppa007883mg
I
0.884
TCM_018621
Theobroma cacao
TCM_018621
I
0.883
PK26741.1
Cannabis sativa
PK26741.1
I
0.882
OPUNC11G01340
Oryza punctata
OPUNC11G01340
N
0.881
Lus10026879.g
Linum usitatissimum
Lus10026879.g
I
0.881
OBART11G01610
Oryza barthii
OBART11G01610
N
0.880
GRMZM2G154182
Zea mays
GRMZM2G154182
N
0.880
Traes_5BL_59AFA4B01
Triticum aestivum
Traes_5BL_59AFA4B01
I
0.880
OGLUM11G01340
Oryza glumaepatula
OGLUM11G01340
N
0.880
BGIOSGA034716
Oryza indica
BGIOSGA034716
N
0.880
OS11G0127600
Oryza sativa
OS11G0127600
N
0.880
OGLUM01G19440
Oryza glumaepatula
OGLUM01G19440
I
0.879
BGIOSGA002597
Oryza indica
BGIOSGA002597
I
0.879
BGIOSGA001578
Oryza indica
BGIOSGA001578
I
0.879
OLONG_022415
Oryza longistaminata
OLONG_022415
I
0.879
OBART01G16620
Oryza barthii
OBART01G16620
I
0.879
OBART01G00360
Oryza barthii
OBART01G00360
I
0.879
OGLUM01G00350
Oryza glumaepatula
OGLUM01G00350
I
0.879
ONIVA01G18370
Oryza nivara
ONIVA01G18370
I
0.879
ORUFI01G18470
Oryza rufipogon
ORUFI01G18470
I
0.879
OS01G0393100
Oryza sativa
OS01G0393100
I
0.879
ORGLA12G0187900
Oryza glaberrima
ORGLA12G0187900
I
0.879
ORUFI01G00320
Oryza rufipogon
ORUFI01G00320
I
0.879
OMERI01G15230
Oryza meridionalis
OMERI01G15230
I
0.879
ONIVA01G00280
Oryza nivara
ONIVA01G00280
I
0.879
Pavir.Eb00976
Panicum virgatum
Pavir.Eb00976
I
0.878
MLOC_58272
Hordeum vulgare
MLOC_58272
N
0.878
Traes_3DS_930F3B5AD
Triticum aestivum
Traes_3DS_930F3B5AD
I
0.877
F775_24687
Aegilops tauschii
F775_24687
I
0.877
OS01G0104500
Oryza sativa
OS01G0104500
I
0.877
Carubv10017737m.g
Capsella rubella
Carubv10017737m.g
I
0.877
Si002074m.g
Setaria italica
Si002074m.g
I
0.877
Si030284m.g
Setaria italica
Si030284m.g
N
0.876
GSMUA_Achr6G08600_001
Musa acuminata
GSMUA_Achr6G08600_001
I
0.876
Pm015914
Prunus mume
Pm015914
I
0.875
Lus10003435.g
Linum usitatissimum
Lus10003435.g
I
0.874
OMERI01G15210
Oryza meridionalis
OMERI01G15210
I
0.874
PGSC0003DMG400001338
Solanum tuberosum
PGSC0003DMG400001338
I
0.874
Solyc02g088180.2
Solanum lycopersicum
Solyc02g088180.2
I
0.874
OB01G10300
Oryza brachyantha
OB01G10300
I
0.873
Bo9g175670
Brassica oleracea
Bo9g175670
I
0.872
GLYMA19G02850
Glycine max
GLYMA19G02850
I
0.872