CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_8g023860
(
Medicago truncatula
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
MTR_8g023860
T293812_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC69
M07216_2.00
Arabidopsis thaliana
WMCTTVTNNNNYAAG
CTTRNNNNABAAGKW
Dap-seq
OMalley et al.(2016)
NTM2_col_b
0.923
0.593
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KEH18540
NAC/NAM
13
141
PVGFRFRPTDEELVNHYLKKKLLGNDSIVNNVIAEVDVCNYEPWDLPAFSVVKSDDPEWFFLCPIDYKYAKSKRFKRTTNTGFWKATGKDRKIKVRGSNNIIGIKKTLVYYNGRVPGVKSSWVIHEYHD
Links
Other
NAC/NAM
family TFs
Other
Medicago truncatula
TFs
125 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MTR_8g023840
Medicago truncatula
MTR_8g023840
I
0.987
MTR_8g023930
Medicago truncatula
MTR_8g023930
I
0.979
Ca_20988
Cicer arietinum
Ca_20988
I
0.976
Gorai.006G203800
Gossypium raimondii
Gorai.006G203800
I
0.970
Lus10032919.g
Linum usitatissimum
Lus10032919.g
I
0.967
Lus10015587.g
Linum usitatissimum
Lus10015587.g
I
0.961
TCM_015535
Theobroma cacao
TCM_015535
I
0.960
Bra033296
Brassica rapa
Bra033296
I
0.955
Gorai.004G125900
Gossypium raimondii
Gorai.004G125900
I
0.955
MTR_5g069030
Medicago truncatula
MTR_5g069030
I
0.954
Gorai.007G017500
Gossypium raimondii
Gorai.007G017500
I
0.952
Bo9g004070
Brassica oleracea
Bo9g004070
I
0.942
MTR_8g023880
Medicago truncatula
MTR_8g023880
N
0.940
AMTR_s00018p00071850
Amborella trichopoda
AMTR_s00018p00071850
I
0.940
GLYMA14G36840
Glycine max
GLYMA14G36840
I
0.940
Bra036328
Brassica rapa
Bra036328
I
0.940
mgf022344m
Mimulus guttatus
mgf022344m
I
0.940
Ca_27204
Cicer arietinum
Ca_27204
I
0.938
PRUPE_ppa022384mg
Prunus persica
PRUPE_ppa022384mg
I
0.937
MTR_3g093050
Medicago truncatula
MTR_3g093050
I
0.937
Bostr.5325s0009
Boechera stricta
Bostr.5325s0009
I
0.936
VIT_15s0048g02320
Vitis vinifera
VIT_15s0048g02320
I
0.936
Ca_04069
Cicer arietinum
Ca_04069
I
0.935
evm.TU.supercontig_3.170
Carica papaya
evm.TU.supercontig_3.170
N
0.933
Pm019659
Prunus mume
Pm019659
I
0.933
Pm028712
Prunus mume
Pm028712
N
0.933
PRUPE_ppa016876mg
Prunus persica
PRUPE_ppa016876mg
N
0.932
Bo5g002860
Brassica oleracea
Bo5g002860
N
0.932
Bostr.5325s0019
Boechera stricta
Bostr.5325s0019
I
0.927
Solyc06g073050.2
Solanum lycopersicum
Solyc06g073050.2
N
0.924
Bostr.4825s0023
Boechera stricta
Bostr.4825s0023
I
0.924
anac069
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_6002854
I
0.923
NAC69
Arabidopsis thaliana
AT4G01550
D
0.923
VIT_15s0048g02300
Vitis vinifera
VIT_15s0048g02300
N
0.922
PGSC0003DMG400000555
Solanum tuberosum
PGSC0003DMG400000555
I
0.921
GRMZM2G003715
Zea mays
GRMZM2G003715
I
0.921
GSMUA_AchrUn_randomG04060_001
Musa acuminata
GSMUA_AchrUn_randomG04060_001
I
0.920
MDP0000392668
Malus domestica
MDP0000392668
N
0.916
MDP0000291838
Malus domestica
MDP0000291838
N
0.916
Solyc03g080090.2
Solanum lycopersicum
Solyc03g080090.2
I
0.916
GSMUA_Achr3G00330_001
Musa acuminata
GSMUA_Achr3G00330_001
I
0.915
Bo00853s060
Brassica oleracea
Bo00853s060
I
0.914
Eucgr.I02571
Eucalyptus grandis
Eucgr.I02571
N
0.913
chr1.LjT41E18.160.nc
Lotus japonicus
chr1.LjT41E18.160.nc
I
0.911
MDP0000282616
Malus domestica
MDP0000282616
I
0.911
OS08G0157900
Oryza sativa
OS08G0157900
I
0.907
ORUFI08G03870
Oryza rufipogon
ORUFI08G03870
I
0.907
PRUPE_ppb017658mg
Prunus persica
PRUPE_ppb017658mg
I
0.907
ONIVA08G03440
Oryza nivara
ONIVA08G03440
I
0.907
BGIOSGA027623
Oryza indica
BGIOSGA027623
I
0.907
Cagra.1968s0045
Capsella grandiflora
Cagra.1968s0045
I
0.906
GSMUA_Achr1G03560_001
Musa acuminata
GSMUA_Achr1G03560_001
I
0.906
Carubv10009049m.g
Capsella rubella
Carubv10009049m.g
I
0.906
OB08G13730
Oryza brachyantha
OB08G13730
I
0.905
OLONG_000105
Oryza longistaminata
OLONG_000105
I
0.904
OBART08G03460
Oryza barthii
OBART08G03460
I
0.904
ORGLA08G0029000
Oryza glaberrima
ORGLA08G0029000
I
0.904
OGLUM08G03540
Oryza glumaepatula
OGLUM08G03540
I
0.904
OMERI08G03500
Oryza meridionalis
OMERI08G03500
I
0.904
OPUNC08G03310
Oryza punctata
OPUNC08G03310
I
0.904
F775_30082
Aegilops tauschii
F775_30082
I
0.902
Traes_7BL_0C386426A
Triticum aestivum
Traes_7BL_0C386426A
I
0.902
TRIUR3_32613
Triticum urartu
TRIUR3_32613
I
0.902
Traes_7DL_AB67A0B36
Triticum aestivum
Traes_7DL_AB67A0B36
I
0.902
MLOC_50406
Hordeum vulgare
MLOC_50406
I
0.902
gene23394-v1.0-hybrid
Fragaria vesca
gene23394-v1.0-hybrid
N
0.902
Traes_7AL_669D4AE47
Triticum aestivum
Traes_7AL_669D4AE47
I
0.902
Carubv10003260m.g
Capsella rubella
Carubv10003260m.g
I
0.901
LPERR08G03510
Leersia perrieri
LPERR08G03510
I
0.900
Bra008553
Brassica rapa
Bra008553
I
0.899
BRADI3G16480
Brachypodium distachyon
BRADI3G16480
I
0.898
Sb10g000101
Sorghum bicolor
Sb10g000101
N
0.896
POPTR_0002s18320
Populus trichocarpa
POPTR_0002s18320
I
0.896
Pavir.Fa01901
Panicum virgatum
Pavir.Fa01901
I
0.895
Si013369m.g
Setaria italica
Si013369m.g
I
0.895
MDP0000907489
Malus domestica
MDP0000907489
N
0.895
Bo5g002850
Brassica oleracea
Bo5g002850
I
0.894
Sb07g003900
Sorghum bicolor
Sb07g003900
I
0.894
GRMZM2G163914
Zea mays
GRMZM2G163914
N
0.894
MDP0000198108
Malus domestica
MDP0000198108
N
0.894
SapurV1A.0024s0340
Salix purpurea
SapurV1A.0024s0340
I
0.894
GSMUA_Achr2G11810_001
Musa acuminata
GSMUA_Achr2G11810_001
I
0.893
Si006105m.g
Setaria italica
Si006105m.g
N
0.893
Thhalv10028684m.g
Eutrema salsugineum
Thhalv10028684m.g
I
0.892
Bostr.25375s0002
Boechera stricta
Bostr.25375s0002
I
0.892
SapurV1A.0003s0330
Salix purpurea
SapurV1A.0003s0330
I
0.892
PRUPE_ppa019780mg
Prunus persica
PRUPE_ppa019780mg
N
0.892
POPTR_0002s15560
Populus trichocarpa
POPTR_0002s15560
I
0.892
PGSC0003DMG402027023
Solanum tuberosum
PGSC0003DMG402027023
N
0.892
GSMUA_Achr11G07800_001
Musa acuminata
GSMUA_Achr11G07800_001
N
0.891
MDP0000138340
Malus domestica
MDP0000138340
N
0.891
MDP0000688878
Malus domestica
MDP0000688878
N
0.891
Pm028711
Prunus mume
Pm028711
I
0.891
Bra027596
Brassica rapa
Bra027596
I
0.890
Thhalv10007665m.g
Eutrema salsugineum
Thhalv10007665m.g
I
0.889
Pavir.Fb00405
Panicum virgatum
Pavir.Fb00405
I
0.889
GSMUA_Achr4G29170_001
Musa acuminata
GSMUA_Achr4G29170_001
I
0.885
mgf015836m
Mimulus guttatus
mgf015836m
I
0.884
Bo9g004110
Brassica oleracea
Bo9g004110
I
0.884
Carubv10009451m.g
Capsella rubella
Carubv10009451m.g
I
0.884
POPTR_0002s18290
Populus trichocarpa
POPTR_0002s18290
I
0.883
Pm028718
Prunus mume
Pm028718
N
0.883
PRUPE_ppa023197mg
Prunus persica
PRUPE_ppa023197mg
N
0.882
POPTR_0002s18310
Populus trichocarpa
POPTR_0002s18310
I
0.882
anac067
Arabidopsis thaliana
AT4G01520
I
0.881
Eucgr.J00531
Eucalyptus grandis
Eucgr.J00531
I
0.879
Pm028720
Prunus mume
Pm028720
N
0.879
Bo5g002810
Brassica oleracea
Bo5g002810
I
0.879
GRMZM2G459156
Zea mays
GRMZM2G459156
N
0.877
ANAC001
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_1000119
I
0.877
Bostr.5325s0018
Boechera stricta
Bostr.5325s0018
I
0.875
BGIOSGA022116
Oryza indica
BGIOSGA022116
N
0.873
ORGLA06G0000500
Oryza glaberrima
ORGLA06G0000500
N
0.873
ORUFI06G00070
Oryza rufipogon
ORUFI06G00070
N
0.873
OS06G0101800
Oryza sativa
OS06G0101800
N
0.873
ONIVA06G00080
Oryza nivara
ONIVA06G00080
N
0.873
OPUNC06G00030
Oryza punctata
OPUNC06G00030
N
0.873
OBART06G00060
Oryza barthii
OBART06G00060
N
0.873
OLONG_004904
Oryza longistaminata
OLONG_004904
N
0.873
OGLUM06G00040
Oryza glumaepatula
OGLUM06G00040
N
0.873
Traes_4AL_22CE41C6F
Triticum aestivum
Traes_4AL_22CE41C6F
N
0.872
MLOC_75297
Hordeum vulgare
MLOC_75297
N
0.872
Bostr.5325s0008
Boechera stricta
Bostr.5325s0008
I
0.872
PRUPE_ppa019865mg
Prunus persica
PRUPE_ppa019865mg
N
0.871
gene08448-v1.0-hybrid
Fragaria vesca
gene08448-v1.0-hybrid
I
0.871