CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
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MTR_8g093790
(
Medicago truncatula
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
MTR_8g093790
T293822_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC002
M00970_2.00
Arabidopsis thaliana
NBACGYAWMN
NKWTRCGTVN
PBM
Lindemose et al.(2014)
ATAF1
0.925
0.509
NAC002
M07159_2.00
Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND
HNRWDDNMDWDWNNNWYACGBM
Dap-seq
OMalley et al.(2016)
ATAF1_col_a
0.925
0.509
NAC002
M07160_2.00
Arabidopsis thaliana
YACGY
RCGTR
Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a
0.925
0.509
NAC48
M11084_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC6_01
0.898
0.472
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AET04757
NAC/NAM
11
119
PPGFYFSPTDEELVLHFLYSKASLPYHPNIIPELHLSHHDPWEIYGKALSSENEHYFFTEVKENRSTENGYWKEIGVTKPINKLGMKKYLVFNLGEGIETSWVMEEYHI
Links
Other
NAC/NAM
family TFs
Other
Medicago truncatula
TFs
84 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA05G32590
Glycine max
GLYMA05G32590
I
0.986
MTR_3g096400
Medicago truncatula
MTR_3g096400
N
0.960
SapurV1A.0171s0340
Salix purpurea
SapurV1A.0171s0340
I
0.940
29992.m001406
Ricinus communis
29992.m001406
I
0.932
Carubv10009926m.g
Capsella rubella
Carubv10009926m.g
I
0.925
Cagra.1968s0112
Capsella grandiflora
Cagra.1968s0112
I
0.925
Bostr.5325s0094
Boechera stricta
Bostr.5325s0094
I
0.925
GLYMA14G24220
Glycine max
GLYMA14G24220
I
0.925
NAC002
Arabidopsis thaliana
AT1G01720
D
0.925
Bra033239
Brassica rapa
Bra033239
I
0.925
cassava28909.valid.m1
Manihot esculenta
cassava28909.valid.m1
I
0.925
Bo5g001100
Brassica oleracea
Bo5g001100
I
0.925
Aquca_014_00255
Aquilegia coerulea
Aquca_014_00255
I
0.924
SapurV1A.3767s0010
Salix purpurea
SapurV1A.3767s0010
I
0.923
SapurV1A.0365s0200
Salix purpurea
SapurV1A.0365s0200
I
0.923
SapurV1A.0740s0040
Salix purpurea
SapurV1A.0740s0040
I
0.922
ATAF1
Arabidopsis lyrata
scaffold_100066.1
I
0.919
AMTR_s00017p00255350
Amborella trichopoda
AMTR_s00017p00255350
I
0.918
TCM_035160
Theobroma cacao
TCM_035160
I
0.916
Gorai.010G051900
Gossypium raimondii
Gorai.010G051900
I
0.916
e_gw1.164.18.1
Physcomitrella patens
e_gw1.164.18.1
I
0.916
MDP0000206868
Malus domestica
MDP0000206868
I
0.915
PK26157.1
Cannabis sativa
PK26157.1
I
0.913
anac032
Vitis vinifera
VIT_18s0001g02300
I
0.912
e_gw1.140.53.1
Physcomitrella patens
e_gw1.140.53.1
I
0.912
Gorai.005G088800
Gossypium raimondii
Gorai.005G088800
I
0.911
e_gw1.164.26.1
Physcomitrella patens
e_gw1.164.26.1
I
0.909
e_gw1.117.35.1
Physcomitrella patens
e_gw1.117.35.1
I
0.908
GSMUA_Achr6G18720_001
Musa acuminata
GSMUA_Achr6G18720_001
I
0.908
Solyc04g009440.2
Solanum lycopersicum
Solyc04g009440.2
I
0.907
Solyc11g017470.1
Solanum lycopersicum
Solyc11g017470.1
I
0.906
MDP0000882033
Malus domestica
MDP0000882033
N
0.905
e_gw1.5.134.1
Physcomitrella patens
e_gw1.5.134.1
I
0.905
e_gw1.259.4.1
Physcomitrella patens
e_gw1.259.4.1
I
0.904
PRUPE_ppa023804mg
Prunus persica
PRUPE_ppa023804mg
N
0.903
PRUPE_ppa025596mg
Prunus persica
PRUPE_ppa025596mg
N
0.903
GSMUA_Achr7G21780_001
Musa acuminata
GSMUA_Achr7G21780_001
I
0.903
MTR_8g094580
Medicago truncatula
MTR_8g094580
I
0.900
LPERR05G13490
Leersia perrieri
LPERR05G13490
I
0.899
GSMUA_Achr4G02390_001
Musa acuminata
GSMUA_Achr4G02390_001
I
0.899
OMERI01G36460
Oryza meridionalis
OMERI01G36460
I
0.898
OGLUM01G43820
Oryza glumaepatula
OGLUM01G43820
I
0.898
NAC48
Oryza sativa
OS01G0884300
D
0.898
OBART01G39590
Oryza barthii
OBART01G39590
I
0.898
OB01G48340
Oryza brachyantha
OB01G48340
I
0.898
ONIVA01G44460
Oryza nivara
ONIVA01G44460
I
0.898
OPUNC01G38300
Oryza punctata
OPUNC01G38300
I
0.898
BGIOSGA000374
Oryza indica
BGIOSGA000374
I
0.898
ORUFI01G42940
Oryza rufipogon
ORUFI01G42940
I
0.898
BRADI2G57100
Brachypodium distachyon
BRADI2G57100
I
0.898
ORGLA01G0334900
Oryza glaberrima
ORGLA01G0334900
I
0.898
LPERR01G34090
Leersia perrieri
LPERR01G34090
I
0.898
F775_28813
Aegilops tauschii
F775_28813
I
0.897
TRAES3BF002300010CFD_g
Triticum aestivum
TRAES3BF002300010CFD_g
I
0.897
Sb03g041920
Sorghum bicolor
Sb03g041920
I
0.897
Si002413m.g
Setaria italica
Si002413m.g
I
0.897
TRIUR3_14109
Triticum urartu
TRIUR3_14109
I
0.897
GRMZM2G014653
Zea mays
GRMZM2G014653
I
0.896
Sb02g006680
Sorghum bicolor
Sb02g006680
I
0.893
GRMZM2G079632
Zea mays
GRMZM2G079632
I
0.893
GLYMA05G32850
Glycine max
GLYMA05G32850
I
0.893
GRMZM2G162739
Zea mays
GRMZM2G162739
I
0.893
LPERR07G06440
Leersia perrieri
LPERR07G06440
I
0.891
Ca_00111
Cicer arietinum
Ca_00111
I
0.891
OB05G24820
Oryza brachyantha
OB05G24820
I
0.891
mgf019285m
Mimulus guttatus
mgf019285m
I
0.890
Gorai.006G088400
Gossypium raimondii
Gorai.006G088400
I
0.889
POPTR_0007s04780
Populus trichocarpa
POPTR_0007s04780
I
0.889
MLOC_59162
Hordeum vulgare
MLOC_59162
I
0.888
SapurV1A.0311s0230
Salix purpurea
SapurV1A.0311s0230
I
0.888
POPTR_0005s07060
Populus trichocarpa
POPTR_0005s07060
I
0.888
BGIOSGA019897
Oryza indica
BGIOSGA019897
I
0.887
OGLUM05G17980
Oryza glumaepatula
OGLUM05G17980
I
0.887
ORGLA05G0146600
Oryza glaberrima
ORGLA05G0146600
I
0.887
ONIVA05G17670
Oryza nivara
ONIVA05G17670
I
0.887
mgf002183m
Mimulus guttatus
mgf002183m
I
0.886
Si030752m.g
Setaria italica
Si030752m.g
I
0.883
Pavir.Ba03301
Panicum virgatum
Pavir.Ba03301
I
0.883
PK25436.1
Cannabis sativa
PK25436.1
N
0.882
Pavir.Bb00806
Panicum virgatum
Pavir.Bb00806
I
0.881
SapurV1A.0093s0260
Salix purpurea
SapurV1A.0093s0260
I
0.880
PRUPE_ppa015761mg
Prunus persica
PRUPE_ppa015761mg
N
0.877
VIT_06s0004g00020
Vitis vinifera
VIT_06s0004g00020
I
0.876
mgf004020m
Mimulus guttatus
mgf004020m
I
0.874