OB01G10300 (Oryza brachyantha)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 OB01G10300 T293829_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ANAC087
M07232_2.00
Arabidopsis thaliana
TDNCKTSHNNNDYACGYHANB

VNTDRCGTRHNNNDSAMGNHA
Dap-seq
OMalley et al.(2016)
ANAC087_colamp_a
0.902 0.791
ANAC087
M07233_2.00
Arabidopsis thaliana
TWNCKTGWNNNDCAMGYHA

TDRCKTGHNNNWCAMGNWA
Dap-seq
OMalley et al.(2016)
ANAC087_col_v3a
0.902 0.791
NAC002
M00970_2.00
Arabidopsis thaliana
NBACGYAWMN

NKWTRCGTVN
PBM
Lindemose et al.(2014)
ATAF1
0.901 0.609
NAC002
M07159_2.00
Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND

HNRWDDNMDWDWNNNWYACGBM
Dap-seq
OMalley et al.(2016)
ATAF1_col_a
0.901 0.609
NAC002
M07160_2.00
Arabidopsis thaliana
YACGY

RCGTR
Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a
0.901 0.609
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB01G10300.1 NAC/NAM 12 139

Links

Other NAC/NAM family TFs
Other Oryza brachyantha TFs

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263 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action