OGLUM04G13590 (Oryza glumaepatula)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 OGLUM04G13590 T294133_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BRN2
M07217_2.00
Arabidopsis thaliana
CKTVHDNNNYAMGYWA

TWRCKTRNNNHDBAMG
Dap-seq
OMalley et al.(2016)
ANAC070_colamp_a
0.964 0.877
BRN2
M07218_2.00
Arabidopsis thaliana
TWDCKTVHDNHDYAMGYWAHH

DDTWRCKTRHDNHDBAMGHWA
Dap-seq
OMalley et al.(2016)
ANAC070_col
0.964 0.877
SMB
M07184_2.00
Arabidopsis thaliana
TWNCKTVHDNHNYAMGYWAYH

DRTWRCKTRNDNHDBAMGNWA
Dap-seq
OMalley et al.(2016)
SMB_col_a
0.924 0.825
SMB
M07185_2.00
Arabidopsis thaliana
TWNCKTVNNNNNYAMG

CKTRNNNNNBAMGNWA
Dap-seq
OMalley et al.(2016)
SMB_colamp_a
0.924 0.825
MDP0000762302
M02383_2.00
Malus domestica
NNNAMKHNWN

NWNDMKTNNN
PBM
Weirauch et al.(2014)
pTH9205
0.916 0.798
NAC012
M00971_2.00
Arabidopsis thaliana
NYAMGYHANN

NNTDRCKTRN
PBM
Lindemose et al.(2014)
SND1
0.908 0.789
OS06G0131700
M02378_2.00
Oryza sativa
NNNNHMDNND

HNNHKDNNNN
PBM
Weirauch et al.(2014)
pTH8356
0.883 0.807
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM04G13590.1 NAC/NAM 11 138

Links

Other NAC/NAM family TFs
Other Oryza glumaepatula TFs

258 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA023775 Oryza indica BGIOSGA023775 N 0.000
gw1.317.1.1 Physcomitrella patens gw1.317.1.1 N 0.000
HelroG192382 Helobdella robusta HelroG192382 N 0.000
LPERR07G21940 Leersia perrieri LPERR07G21940 N 0.000
mgf003101m Mimulus guttatus mgf003101m N 0.000
OBART07G25200 Oryza barthii OBART07G25200 N 0.000
OGLUM07G25180 Oryza glumaepatula OGLUM07G25180 N 0.000
OLONG_013854 Oryza longistaminata OLONG_013854 N 0.000
ONIVA07G24840 Oryza nivara ONIVA07G24840 N 0.000
ORGLA07G0195200 Oryza glaberrima ORGLA07G0195200 N 0.000
ORUFI07G26110 Oryza rufipogon ORUFI07G26110 N 0.000
OS07G0660200 Oryza sativa OS07G0660200 N 0.000