CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
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OGLUM04G25460
(
Oryza glumaepatula
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
OGLUM04G25460
T294140_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM04G25460.1
NAC/NAM
12
154
PPGFRFHPMDEELVVDYLYHKLSGGGGGGAGEFYGGVAMVDVDLNKCEPWELPDAARVGATEWYFFSLHDRKYATGQRTNRATRSGYWKATGKDRAIVTRRRAAAGEAVAGGEVVGMRKTLVFYQGRAPRGSKTEWVMHEFRV
OGLUM04G25460.2
NAC/NAM
12
179
PPGFRFHPMDEELVVDYLYHKLSGGGGGGAGEFYGGVAMVDVDLNKCEPWELPAYFLHNLIIFPARARARAAGRRRRADAARVGATEWYFFSLHDRKYATGQRTNRATRSGYWKATGKDRAIVTRRRAAAGEAVAGGEVVGMRKTLVFYQGRAPRGSKTEWVMHEFRV
Links
Other
NAC/NAM
family TFs
Other
Oryza glumaepatula
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ONIVA04G24570
Oryza nivara
ONIVA04G24570
N
0.998
OPUNC04G23070
Oryza punctata
OPUNC04G23070
N
0.997
Lus10042466.g
Linum usitatissimum
Lus10042466.g
N
0.974
LPERR04G21110
Leersia perrieri
LPERR04G21110
N
0.969
Lus10026200.g
Linum usitatissimum
Lus10026200.g
N
0.968
OB04G32440
Oryza brachyantha
OB04G32440
N
0.964
ORGLA04G0226100
Oryza glaberrima
ORGLA04G0226100
N
0.957
OMERI04G21180
Oryza meridionalis
OMERI04G21180
N
0.952
VIT_19s0027g00230
Vitis vinifera
VIT_19s0027g00230
N
0.948
BGIOSGA014342
Oryza indica
BGIOSGA014342
N
0.935
ORUFI04G27160
Oryza rufipogon
ORUFI04G27160
N
0.935
Eucgr.B03693
Eucalyptus grandis
Eucgr.B03693
N
0.930
OBART04G25950
Oryza barthii
OBART04G25950
N
0.929
MTR_3g116070
Medicago truncatula
MTR_3g116070
N
0.913
Pavir.Ga00022
Panicum virgatum
Pavir.Ga00022
I
0.912
Pavir.Gb00488
Panicum virgatum
Pavir.Gb00488
N
0.909
BGIOSGA014332
Oryza indica
BGIOSGA014332
N
0.903
Eucgr.L02674
Eucalyptus grandis
Eucgr.L02674
N
0.898
Eucgr.B03703
Eucalyptus grandis
Eucgr.B03703
N
0.898
orange1.1g041697m.g
Citrus sinensis
orange1.1g041697m.g
N
0.894
orange1.1g046003m.g
Citrus sinensis
orange1.1g046003m.g
N
0.893
OLONG_016454
Oryza longistaminata
OLONG_016454
N
0.887
PGSC0003DMG400036651
Solanum tuberosum
PGSC0003DMG400036651
N
0.886
Ciclev10033957m.g
Citrus clementina
Ciclev10033957m.g
N
0.878
Ciclev10033536m.g
Citrus clementina
Ciclev10033536m.g
N
0.878
Ciclev10033459m.g
Citrus clementina
Ciclev10033459m.g
N
0.877
Ciclev10033346m.g
Citrus clementina
Ciclev10033346m.g
N
0.877
Ciclev10033526m.g
Citrus clementina
Ciclev10033526m.g
N
0.877
Si004703m.g
Setaria italica
Si004703m.g
N
0.877
Si010680m.g
Setaria italica
Si010680m.g
I
0.877
Ciclev10033541m.g
Citrus clementina
Ciclev10033541m.g
N
0.877
orange1.1g042765m.g
Citrus sinensis
orange1.1g042765m.g
N
0.874
TRIUR3_34020
Triticum urartu
TRIUR3_34020
N
0.873
Traes_2AL_CA89051FD
Triticum aestivum
Traes_2AL_CA89051FD
N
0.873
orange1.1g044940m.g
Citrus sinensis
orange1.1g044940m.g
N
0.872