CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ONIVA06G00260 *(Oryza nivara)* NAC/NAM
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF02365 (NAM)	IPR003441	ONIVA06G00260	T294523_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
NAC037 M07187_2.00	Arabidopsis thaliana	CKTVNDNHNYAMG	CKTRNDNHNBAMG	Dap-seq OMalley et al.(2016) VND1_col_a	0.898	0.816
ANAC076 M07224_2.00	Arabidopsis thaliana	TRCKTVHNNHNYAMG	CKTRNDNNDBAMGYA	Dap-seq OMalley et al.(2016) VND2_col_a	0.889	0.807
ANAC076 M07225_2.00	Arabidopsis thaliana	TTGCKTVHNNHNYAMGYHAHNNN	NNNDTDRCKTRNDNNDBAMGCAA	Dap-seq OMalley et al.(2016) VND2_colamp_a	0.889	0.807
NAC007 M07164_2.00	Arabidopsis thaliana	TTRCKTVHDNNNYAMG	CKTRNNNHDBAMGYAA	Dap-seq OMalley et al.(2016) VND4_colamp_a	0.872	0.807
NAC007 M07165_2.00	Arabidopsis thaliana	TGCKTVHDNHDYAMG	CKTRHDNHDBAMGCA	Dap-seq OMalley et al.(2016) VND4_col	0.872	0.807
For this family, TFs with SR scores > 0.870* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ONIVA06G00260.1	NAC/NAM	18	152	PPGFRFHPTDEELVDYYLRKKVAARRIDLNVIKDVDLYKIEPWDLQERCRINGGSAAEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKPIYATKQHSLLVGMRKTLVYYRGRAPNGHKSDWIMHEYRL

Links
Other NAC/NAM family TFs
Other *Oryza nivara* TFs