CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ONIVA06G00260
(
Oryza nivara
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
ONIVA06G00260
T294523_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC037
M07187_2.00
Arabidopsis thaliana
CKTVNDNHNYAMG
CKTRNDNHNBAMG
Dap-seq
OMalley et al.(2016)
VND1_col_a
0.898
0.816
ANAC076
M07224_2.00
Arabidopsis thaliana
TRCKTVHNNHNYAMG
CKTRNDNNDBAMGYA
Dap-seq
OMalley et al.(2016)
VND2_col_a
0.889
0.807
ANAC076
M07225_2.00
Arabidopsis thaliana
TTGCKTVHNNHNYAMGYHAHNNN
NNNDTDRCKTRNDNNDBAMGCAA
Dap-seq
OMalley et al.(2016)
VND2_colamp_a
0.889
0.807
NAC007
M07164_2.00
Arabidopsis thaliana
TTRCKTVHDNNNYAMG
CKTRNNNHDBAMGYAA
Dap-seq
OMalley et al.(2016)
VND4_colamp_a
0.872
0.807
NAC007
M07165_2.00
Arabidopsis thaliana
TGCKTVHDNHDYAMG
CKTRHDNHDBAMGCA
Dap-seq
OMalley et al.(2016)
VND4_col
0.872
0.807
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA06G00260.1
NAC/NAM
18
152
PPGFRFHPTDEELVDYYLRKKVAARRIDLNVIKDVDLYKIEPWDLQERCRINGGSAAEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKPIYATKQHSLLVGMRKTLVYYRGRAPNGHKSDWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Oryza nivara
TFs
268 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_185241
Agaricus bisporus
AGABI2DRAFT_185241
N
0.000
CC1G_02044
Coprinopsis cinerea
CC1G_02044
N
0.000
CY34DRAFT_24942
Suillus luteus
CY34DRAFT_24942
N
0.000
GALMADRAFT_226967
Galerina marginata
GALMADRAFT_226967
N
0.000
Genemark.6330_g
Heterobasidion annosum
Genemark.6330_g
N
0.000
K443DRAFT_127765
Laccaria amethystina
K443DRAFT_127765
N
0.000
M378DRAFT_70441
Amanita muscaria
M378DRAFT_70441
N
0.000
M404DRAFT_950511
Pisolithus tinctorius
M404DRAFT_950511
N
0.000
M413DRAFT_329591
Hebeloma cylindrosporum
M413DRAFT_329591
N
0.000
Moror_16312
Moniliophthora roreri
Moror_16312
N
0.000
PAXRUDRAFT_831648
Paxillus rubicundulus
PAXRUDRAFT_831648
N
0.000
PHACADRAFT_257807
Phanerochaete carnosa
PHACADRAFT_257807
N
0.000
PILCRDRAFT_823901
Piloderma croceum
PILCRDRAFT_823901
N
0.000
PISMIDRAFT_674167
Pisolithus microcarpus
PISMIDRAFT_674167
N
0.000
PLEOSDRAFT_1089566
Pleurotus ostreatus
PLEOSDRAFT_1089566
N
0.000
POSPLDRAFT_102661
Postia placenta
POSPLDRAFT_102661
N
0.000
SCLCIDRAFT_1222613
Scleroderma citrinum
SCLCIDRAFT_1222613
N
0.000
SERLA73DRAFT_52202
Serpula lacrymans
SERLA73DRAFT_52202
N
0.000