ORGLA03G0005100 (Oryza glaberrima)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 ORGLA03G0005100 T294756_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC002
M00970_2.00
Arabidopsis thaliana
NBACGYAWMN

NKWTRCGTVN
PBM
Lindemose et al.(2014)
ATAF1
0.874 0.583
NAC002
M07159_2.00
Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND

HNRWDDNMDWDWNNNWYACGBM
Dap-seq
OMalley et al.(2016)
ATAF1_col_a
0.874 0.583
NAC002
M07160_2.00
Arabidopsis thaliana
YACGY

RCGTR
Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a
0.874 0.583
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA03G0005100.1 NAC/NAM 24 148

Links

Other NAC/NAM family TFs
Other Oryza glaberrima TFs

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
NAC002 Arabidopsis thaliana AT1G01720 D 0.874
PK26157.1 Cannabis sativa PK26157.1 I 0.881
e_gw1.259.4.1 Physcomitrella patens e_gw1.259.4.1 I 0.878
e_gw1.164.26.1 Physcomitrella patens e_gw1.164.26.1 I 0.875
e_gw1.164.18.1 Physcomitrella patens e_gw1.164.18.1 I 0.880
e_gw1.140.53.1 Physcomitrella patens e_gw1.140.53.1 I 0.874
e_gw1.117.35.1 Physcomitrella patens e_gw1.117.35.1 I 0.878
cassava28909.valid.m1 Manihot esculenta cassava28909.valid.m1 I 0.875
anac032 Vitis vinifera VIT_18s0001g02300 I 0.883
VIT_06s0004g00020 Vitis vinifera VIT_06s0004g00020 I 0.890
TCM_035160 Theobroma cacao TCM_035160 I 0.882
Solyc11g017470.1 Solanum lycopersicum Solyc11g017470.1 I 0.878
Solyc04g009440.2 Solanum lycopersicum Solyc04g009440.2 I 0.874
ATAF1 Arabidopsis lyrata scaffold_100066.1 I 0.874
Sb02g006680 Sorghum bicolor Sb02g006680 I 0.884
e_gw1.5.134.1 Physcomitrella patens e_gw1.5.134.1 I 0.879
fgenesh1_pg.scaffold_182000024 Physcomitrella patens fgenesh1_pg.scaffold_182000024 I 0.879
SapurV1A.3767s0010 Salix purpurea SapurV1A.3767s0010 I 0.882
SapurV1A.0740s0040 Salix purpurea SapurV1A.0740s0040 I 0.883
SapurV1A.0365s0200 Salix purpurea SapurV1A.0365s0200 I 0.873
SapurV1A.0093s0260 Salix purpurea SapurV1A.0093s0260 I 0.879
Pavir.Ea03621 Panicum virgatum Pavir.Ea03621 I 0.874
Gorai.010G051900 Gossypium raimondii Gorai.010G051900 I 0.882
Carubv10009926m.g Capsella rubella Carubv10009926m.g I 0.874
Cagra.1968s0112 Capsella grandiflora Cagra.1968s0112 I 0.874
Bostr.5325s0094 Boechera stricta Bostr.5325s0094 I 0.874
Aquca_014_00255 Aquilegia coerulea Aquca_014_00255 I 0.886
mgf013201m Mimulus guttatus mgf013201m I 0.895
gw1.6.394.1 Physcomitrella patens gw1.6.394.1 I 0.871
gw1.1.690.1 Physcomitrella patens gw1.1.690.1 I 0.875
Gorai.005G088800 Gossypium raimondii Gorai.005G088800 I 0.892
OLONG_025732 Oryza longistaminata OLONG_025732 I 0.993
OGLUM03G00640 Oryza glumaepatula OGLUM03G00640 I 0.996
GRMZM2G162739 Zea mays GRMZM2G162739 I 0.883
OBART03G00700 Oryza barthii OBART03G00700 I 0.996
Bra033239 Brassica rapa Bra033239 I 0.874
GRMZM2G079632 Zea mays GRMZM2G079632 I 0.883
GLYMA14G24220 Glycine max GLYMA14G24220 I 0.874
GSMUA_Achr9G10040_001 Musa acuminata GSMUA_Achr9G10040_001 I 0.872
GSMUA_Achr6G31580_001 Musa acuminata GSMUA_Achr6G31580_001 I 0.877
GSMUA_Achr4G02390_001 Musa acuminata GSMUA_Achr4G02390_001 I 0.884
AMTR_s00022p00160350 Amborella trichopoda AMTR_s00022p00160350 I 0.878
Bo5g001100 Brassica oleracea Bo5g001100 I 0.874
BGIOSGA011685 Oryza indica BGIOSGA011685 I 0.995
PRUPE_ppa008801mg Prunus persica PRUPE_ppa008801mg N 0.888
gene10469-v1.0-hybrid Fragaria vesca gene10469-v1.0-hybrid N 0.890
Thhalv10021297m.g Eutrema salsugineum Thhalv10021297m.g N 0.897
29650.m000275 Ricinus communis 29650.m000275 N 0.934
AMTR_s00067p00064350 Amborella trichopoda AMTR_s00067p00064350 N 0.914
BGIOSGA007201 Oryza indica BGIOSGA007201 N 0.922
GLYMA08G18470 Glycine max GLYMA08G18470 N 0.921
Bra034713 Brassica rapa Bra034713 N 0.895
Bo3g065240 Brassica oleracea Bo3g065240 N 0.897
Bra001480 Brassica rapa Bra001480 N 0.897
SapurV1A.0085s0410 Salix purpurea SapurV1A.0085s0410 N 0.950
Bo5g132990 Brassica oleracea Bo5g132990 N 0.893
evm.TU.supercontig_165.12 Carica papaya evm.TU.supercontig_165.12 N 0.956
GSMUA_Achr11G22760_001 Musa acuminata GSMUA_Achr11G22760_001 N 0.911
OPUNC03G00610 Oryza punctata OPUNC03G00610 N 0.982
ORUFI02G25930 Oryza rufipogon ORUFI02G25930 N 0.963
ORUFI03G00490 Oryza rufipogon ORUFI03G00490 N 0.933
OS03G0109000 Oryza sativa OS03G0109000 N 0.933
PGSC0003DMG400022134 Solanum tuberosum PGSC0003DMG400022134 N 0.903
OMERI03G00460 Oryza meridionalis OMERI03G00460 N 0.988
OMERI02G24100 Oryza meridionalis OMERI02G24100 N 0.962
Sb10g027100 Sorghum bicolor Sb10g027100 N 0.926
ONIVA02G26880 Oryza nivara ONIVA02G26880 N 0.962
OLONG_000596 Oryza longistaminata OLONG_000596 N 0.959
OGLUM02G24950 Oryza glumaepatula OGLUM02G24950 N 0.962
OBART02G24560 Oryza barthii OBART02G24560 N 0.962
Cla023574 Citrullus lanatus Cla023574 N 0.947
OB03G10720 Oryza brachyantha OB03G10720 N 0.975
OB02G31950 Oryza brachyantha OB02G31950 N 0.963
LPERR02G20100 Leersia perrieri LPERR02G20100 N 0.950
GSMUA_Achr6G36550_001 Musa acuminata GSMUA_Achr6G36550_001 N 0.896
ONIVA11G21150 Oryza nivara ONIVA11G21150 N 0.923