NAC48 (Oryza sativa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 OS01G0884300 T294999_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC48
M11084_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC6_01
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC002
M00970_2.00
Arabidopsis thaliana
NBACGYAWMN

NKWTRCGTVN
PBM
Lindemose et al.(2014)
ATAF1
0.994 0.904
NAC002
M07159_2.00
Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND

HNRWDDNMDWDWNNNWYACGBM
Dap-seq
OMalley et al.(2016)
ATAF1_col_a
0.994 0.904
NAC002
M07160_2.00
Arabidopsis thaliana
YACGY

RCGTR
Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a
0.994 0.904
AT3G12910
M07204_2.00
Arabidopsis thaliana
YGSCGKNDNDDHNMCGB

VCGKNDHHNHNMCGSCR
Dap-seq
OMalley et al.(2016)
AT3G12910_col_a
0.930 0.544
NAC101
M07241_2.00
Arabidopsis thaliana
TGCKTVNDNHNYAMG

CKTRNDNHNBAMGCA
Dap-seq
OMalley et al.(2016)
VND6_colamp_a
0.875 0.561
NAC101
M07242_2.00
Arabidopsis thaliana
TTGCKTVHDNNNYAMGYHWHN

NDWDRCKTRNNNHDBAMGCAA
Dap-seq
OMalley et al.(2016)
VND6_col_v31
0.875 0.561
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OS01T0884300-01 NAC/NAM 10 133

Links

Other NAC/NAM family TFs
Other Oryza sativa TFs

426 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TRIATDRAFT_321166 Trichoderma atroviride TRIATDRAFT_321166 I 0.000
VHEMI10573 Torrubiella hemipterigena VHEMI10573 I 0.000
EuGene.0000160151 Micromonas pusilla EuGene.0000160151 N 0.000
EuGene.1600010185 Ostreococcus RCC809 EuGene.1600010185 N 0.000
estExt_fgenesh2_pg.C_Chr_100288 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_100288 N 0.000
gw1.17.00.287.1 Ostreococcus tauri gw1.17.00.287.1 N 0.000