PGSC0003DMG400005384 (Solanum tuberosum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 PGSC0003DMG400005384 T295102_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
anac058
M00886_2.00 		Arabidopsis thaliana
CGTTGTCT
AGACAACG		 PBM
Franco-Zorrilla et al.(2014)
ANAC58 		0.937 0.851
anac058
M07210_2.00 		Arabidopsis thaliana
CKTGHNNNRCAMGYWA
TWRCKTGYNNNDCAMG		 Dap-seq
OMalley et al.(2016)
ANAC058_col_a 		0.937 0.851
anac058
M07211_2.00 		Arabidopsis thaliana
TDCKTGHNNNDCAMGHHA
TDDCKTGHNNNDCAMGHA		 Dap-seq
OMalley et al.(2016)
ANAC058_colamp_a 		0.937 0.851
ANAC038
M07188_2.00 		Arabidopsis thaliana
DNCKTRHNNHDCAMGYWA
TWRCKTGHDNNDYAMGNH		 Dap-seq
OMalley et al.(2016)
ANAC038_col_a 		0.889 0.807
ANAC038
M07189_2.00 		Arabidopsis thaliana
TTDCTTGWNNHDYAMGHHAHH
DDTDDCKTRHDNNWCAAGHAA		 Dap-seq
OMalley et al.(2016)
ANAC038_colamp_a 		0.889 0.807
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400013753 NAC/NAM 6 132

Links

Other NAC/NAM family TFs
Other Solanum tuberosum TFs

139 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc12g036480.1 Solanum lycopersicum Solyc12g036480.1 I 0.964
PGSC0003DMG400028779 Solanum tuberosum PGSC0003DMG400028779 I 0.959
Solyc06g069100.1 Solanum lycopersicum Solyc06g069100.1 I 0.954
GSMUA_Achr10G19900_001 Musa acuminata GSMUA_Achr10G19900_001 I 0.948
Aquca_026_00305 Aquilegia coerulea Aquca_026_00305 I 0.948
mgf021065m Mimulus guttatus mgf021065m I 0.943
Gorai.006G060900 Gossypium raimondii Gorai.006G060900 I 0.943
Bostr.26675s0262 Boechera stricta Bostr.26675s0262 I 0.942
OPUNC03G24220 Oryza punctata OPUNC03G24220 I 0.942
Thhalv10021200m.g Eutrema salsugineum Thhalv10021200m.g I 0.941
SapurV1A.1146s0010 Salix purpurea SapurV1A.1146s0010 I 0.940
Si036535m.g Setaria italica Si036535m.g I 0.939
TCM_012350 Theobroma cacao TCM_012350 I 0.939
Bo01320s020 Brassica oleracea Bo01320s020 I 0.938
Bra022319 Brassica rapa Bra022319 I 0.938
Bra001705 Brassica rapa Bra001705 I 0.938
Bo3g071500 Brassica oleracea Bo3g071500 I 0.938
GSMUA_Achr8G18420_001 Musa acuminata GSMUA_Achr8G18420_001 I 0.937
Thhalv10011708m.g Eutrema salsugineum Thhalv10011708m.g I 0.937
anac058 Arabidopsis thaliana AT3G18400 D 0.937
POPTR_0015s03700 Populus trichocarpa POPTR_0015s03700 I 0.937
POPTR_0012s05280 Populus trichocarpa POPTR_0012s05280 I 0.937
Ciclev10023578m.g Citrus clementina Ciclev10023578m.g I 0.937
anac058 Arabidopsis lyrata Al_scaffold_0003_1942 I 0.937
29974.m000235 Ricinus communis 29974.m000235 I 0.937
MDP0000153949 Malus domestica MDP0000153949 I 0.936
LPERR03G21900 Leersia perrieri LPERR03G21900 I 0.936
cassava9086.m1 Manihot esculenta cassava9086.m1 I 0.936
Sb01g014310 Sorghum bicolor Sb01g014310 I 0.936
Bostr.19424s0822 Boechera stricta Bostr.19424s0822 I 0.936
MDP0000246482 Malus domestica MDP0000246482 I 0.936
ONIVA03G27500 Oryza nivara ONIVA03G27500 I 0.935
OS03G0624600 Oryza sativa OS03G0624600 I 0.935
ORGLA03G0246300 Oryza glaberrima ORGLA03G0246300 I 0.935
ORUFI03G27440 Oryza rufipogon ORUFI03G27440 I 0.935
OMERI03G23890 Oryza meridionalis OMERI03G23890 I 0.935
BGIOSGA013151 Oryza indica BGIOSGA013151 I 0.935
Pavir.Ib03976 Panicum virgatum Pavir.Ib03976 I 0.935
Cagra.1681s0009 Capsella grandiflora Cagra.1681s0009 I 0.935
evm.TU.supercontig_3.509 Carica papaya evm.TU.supercontig_3.509 I 0.935
OBART03G26480 Oryza barthii OBART03G26480 I 0.935
OGLUM03G27330 Oryza glumaepatula OGLUM03G27330 I 0.935
SapurV1A.1381s0060 Salix purpurea SapurV1A.1381s0060 I 0.934
anac058 Vitis vinifera VIT_17s0000g03660 I 0.934
SapurV1A.1381s0050 Salix purpurea SapurV1A.1381s0050 I 0.934
SapurV1A.0719s0060 Salix purpurea SapurV1A.0719s0060 I 0.934
Eucgr.B00724 Eucalyptus grandis Eucgr.B00724 I 0.933
Pavir.Ia01262 Panicum virgatum Pavir.Ia01262 I 0.933
Eucgr.C02105 Eucalyptus grandis Eucgr.C02105 I 0.931
AMTR_s00079p00099620 Amborella trichopoda AMTR_s00079p00099620 I 0.931
OB03G34470 Oryza brachyantha OB03G34470 I 0.929
PK02366.1 Cannabis sativa PK02366.1 I 0.929
MLOC_68284 Hordeum vulgare MLOC_68284 I 0.929
Bo1g117610 Brassica oleracea Bo1g117610 I 0.928
Carubv10015990m.g Capsella rubella Carubv10015990m.g I 0.928
Traes_4AL_B44DF4ACC Triticum aestivum Traes_4AL_B44DF4ACC I 0.928
Traes_4BS_373BDBA94 Triticum aestivum Traes_4BS_373BDBA94 I 0.928
F775_05949 Aegilops tauschii F775_05949 I 0.928
TRIUR3_27612 Triticum urartu TRIUR3_27612 I 0.928
BRADI1G14467 Brachypodium distachyon BRADI1G14467 I 0.928
Bra037585 Brassica rapa Bra037585 I 0.928
evm.TU.supercontig_244.7 Carica papaya evm.TU.supercontig_244.7 I 0.926
28226.m000851 Ricinus communis 28226.m000851 I 0.926
PRUPE_ppa025916mg Prunus persica PRUPE_ppa025916mg I 0.925
MDP0000690168 Malus domestica MDP0000690168 I 0.925
Pm005091 Prunus mume Pm005091 I 0.925
MDP0000232008 Malus domestica MDP0000232008 I 0.924
cassava2919.m1 Manihot esculenta cassava2919.m1 I 0.923
cassava18338.valid.m1 Manihot esculenta cassava18338.valid.m1 I 0.922
Ciclev10008885m.g Citrus clementina Ciclev10008885m.g I 0.922
MTR_3g109340 Medicago truncatula MTR_3g109340 I 0.922
Gorai.010G124100 Gossypium raimondii Gorai.010G124100 I 0.922
TCM_036791 Theobroma cacao TCM_036791 I 0.922
orange1.1g037591m.g Citrus sinensis orange1.1g037591m.g I 0.922
Lus10038937.g Linum usitatissimum Lus10038937.g I 0.921
ANAC039 Vitis vinifera VIT_04s0008g02710 I 0.920
chr1.LjT35C22.60.nc Lotus japonicus chr1.LjT35C22.60.nc I 0.919
Eucgr.K02225 Eucalyptus grandis Eucgr.K02225 I 0.918
SapurV1A.1363s0020 Salix purpurea SapurV1A.1363s0020 I 0.917
Lus10027227.g Linum usitatissimum Lus10027227.g I 0.917
POPTR_0018s03910 Populus trichocarpa POPTR_0018s03910 I 0.917
SapurV1A.1285s0100 Salix purpurea SapurV1A.1285s0100 I 0.917
gene08765-v1.0-hybrid Fragaria vesca gene08765-v1.0-hybrid I 0.914
Lus10020165.g Linum usitatissimum Lus10020165.g I 0.911
POPTR_0006s29180 Populus trichocarpa POPTR_0006s29180 I 0.910
Lus10009669.g Linum usitatissimum Lus10009669.g I 0.908
SapurV1A.0346s0160 Salix purpurea SapurV1A.0346s0160 I 0.908
Cucsa.161510 Cucumis sativus Cucsa.161510 I 0.908
Cla022572 Citrullus lanatus Cla022572 I 0.908
mgf025158m Mimulus guttatus mgf025158m I 0.908
Aquca_018_00116 Aquilegia coerulea Aquca_018_00116 I 0.906
SapurV1A.0263s0310 Salix purpurea SapurV1A.0263s0310 I 0.906
GSMUA_Achr7G19680_001 Musa acuminata GSMUA_Achr7G19680_001 I 0.906
Lus10009029.g Linum usitatissimum Lus10009029.g I 0.905
SapurV1A.0377s0130 Salix purpurea SapurV1A.0377s0130 I 0.904
Lus10001648.g Linum usitatissimum Lus10001648.g I 0.904
MTR_4g108760 Medicago truncatula MTR_4g108760 I 0.904
Lus10021659.g Linum usitatissimum Lus10021659.g I 0.904
POPTR_0012s01610 Populus trichocarpa POPTR_0012s01610 I 0.904
Lus10026966.g Linum usitatissimum Lus10026966.g I 0.904
POPTR_0015s02170 Populus trichocarpa POPTR_0015s02170 I 0.903
Bra003023 Brassica rapa Bra003023 I 0.902
GLYMA06G08440 Glycine max GLYMA06G08440 I 0.901
30138.m004055 Ricinus communis 30138.m004055 I 0.900
cassava17517.valid.m1 Manihot esculenta cassava17517.valid.m1 I 0.900
GLYMA04G08320 Glycine max GLYMA04G08320 I 0.900
PGSC0003DMG400014845 Solanum tuberosum PGSC0003DMG400014845 I 0.898
gene26043-v1.0-hybrid Fragaria vesca gene26043-v1.0-hybrid I 0.896
GSMUA_Achr8G21470_001 Musa acuminata GSMUA_Achr8G21470_001 I 0.895
GLYMA14G20276 Glycine max GLYMA14G20276 I 0.893
orange1.1g017827m.g Citrus sinensis orange1.1g017827m.g I 0.893
Ciclev10020480m.g Citrus clementina Ciclev10020480m.g I 0.893
Bra007855 Brassica rapa Bra007855 I 0.889
ANAC039 Arabidopsis lyrata fgenesh1_pg.C_scaffold_4000352 I 0.889
ANAC038 Arabidopsis thaliana AT2G24430 D 0.889
Bra032095 Brassica rapa Bra032095 I 0.889
Bostr.27895s0039 Boechera stricta Bostr.27895s0039 I 0.889
Cagra.4091s0015 Capsella grandiflora Cagra.4091s0015 I 0.889
Carubv10025508m.g Capsella rubella Carubv10025508m.g I 0.889
Bo8g099810 Brassica oleracea Bo8g099810 I 0.889
Thhalv10000520m.g Eutrema salsugineum Thhalv10000520m.g I 0.888
Solyc06g069710.2 Solanum lycopersicum Solyc06g069710.2 I 0.888
PGSC0003DMG400033047 Solanum tuberosum PGSC0003DMG400033047 I 0.887
Cla019391 Citrullus lanatus Cla019391 I 0.884
Solyc03g115850.2 Solanum lycopersicum Solyc03g115850.2 I 0.884
Solyc08g006020.2 Solanum lycopersicum Solyc08g006020.2 I 0.884
mgf021404m Mimulus guttatus mgf021404m I 0.882
Cucsa.197830 Cucumis sativus Cucsa.197830 I 0.882
PGSC0003DMG400019523 Solanum tuberosum PGSC0003DMG400019523 I 0.880
cassava46147.m1 Manihot esculenta cassava46147.m1 I 0.880
GLYMA05G35090 Glycine max GLYMA05G35090 N 0.878
GLYMA08G04610 Glycine max GLYMA08G04610 N 0.876
Solyc07g062840.2 Solanum lycopersicum Solyc07g062840.2 I 0.875
Ciclev10008619m.g Citrus clementina Ciclev10008619m.g I 0.875
orange1.1g047710m.g Citrus sinensis orange1.1g047710m.g I 0.875
MTR_3g435150 Medicago truncatula MTR_3g435150 I 0.874
Gorai.007G323900 Gossypium raimondii Gorai.007G323900 I 0.872
Bo4g154590 Brassica oleracea Bo4g154590 I 0.871
TRIUR3_00447 Triticum urartu TRIUR3_00447 N 0.871