CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400005807
(
Solanum tuberosum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
PGSC0003DMG400005807
T295105_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MDP0000762302
M02383_2.00
Malus domestica
NNNAMKHNWN
NWNDMKTNNN
PBM
Weirauch et al.(2014)
pTH9205
0.878
0.836
NAC012
M00971_2.00
Arabidopsis thaliana
NYAMGYHANN
NNTDRCKTRN
PBM
Lindemose et al.(2014)
SND1
0.883
0.821
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400014871
NAC/NAM
12
134
PPGFRFHPTEEELLHYYLRKKIANEKIDLDVIREVDLNKLEPWDIQGSTPQNDWYLFSHKDKKYPSGSRTNRATAAGFWKATGRDKVIYGNCKRIGMRKTLVFYKGRAPHGLKLDWIMHEYRL
PGSC0003DMT400014872
NAC/NAM
12
139
PPGFRFHPTEEELLHYYLRKKIANEKIDLDVIREVDLNKLEPWDIQEKCKIGSTPQNDWYLFSHKDKKYPSGSRTNRATAAGFWKATGRDKVIYGNCKRIGMRKTLVFYKGRAPHGLKLDWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Solanum tuberosum
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Solyc08g008660.2
Solanum lycopersicum
Solyc08g008660.2
I
0.955
GLYMA19G44890
Glycine max
GLYMA19G44890
I
0.917
SapurV1A.0941s0070
Salix purpurea
SapurV1A.0941s0070
I
0.911
SapurV1A.2717s0010
Salix purpurea
SapurV1A.2717s0010
I
0.911
GLYMA19G44910
Glycine max
GLYMA19G44910
N
0.911
POPTR_0001s45250
Populus trichocarpa
POPTR_0001s45250
I
0.911
PGSC0003DMG400012113
Solanum tuberosum
PGSC0003DMG400012113
I
0.909
POPTR_0011s15640
Populus trichocarpa
POPTR_0011s15640
I
0.906
Eucgr.E01053
Eucalyptus grandis
Eucgr.E01053
I
0.906
SapurV1A.0131s0060
Salix purpurea
SapurV1A.0131s0060
I
0.906
PK22182.1
Cannabis sativa
PK22182.1
I
0.905
MDP0000762302
Malus domestica
MDP0000762302
D
0.903
MDP0000140229
Malus domestica
MDP0000140229
I
0.903
cassava45846.m1
Manihot esculenta
cassava45846.m1
I
0.900
evm.TU.supercontig_37.89
Carica papaya
evm.TU.supercontig_37.89
I
0.899
Gorai.008G259700
Gossypium raimondii
Gorai.008G259700
I
0.898
Ciclev10021141m.g
Citrus clementina
Ciclev10021141m.g
I
0.897
gene01881-v1.0-hybrid
Fragaria vesca
gene01881-v1.0-hybrid
I
0.897
PGSC0003DMG400011268
Solanum tuberosum
PGSC0003DMG400011268
I
0.897
Gorai.004G129200
Gossypium raimondii
Gorai.004G129200
I
0.897
cassava42638.valid.m1
Manihot esculenta
cassava42638.valid.m1
I
0.897
TCM_015621
Theobroma cacao
TCM_015621
I
0.897
orange1.1g014260m.g
Citrus sinensis
orange1.1g014260m.g
I
0.897
Solyc10g005010.2
Solanum lycopersicum
Solyc10g005010.2
I
0.897
30068.m002591
Ricinus communis
30068.m002591
I
0.897
Pm024260
Prunus mume
Pm024260
I
0.896
PRUPE_ppa006801mg
Prunus persica
PRUPE_ppa006801mg
I
0.896
Gorai.003G077700
Gossypium raimondii
Gorai.003G077700
I
0.891
Lus10017340.g
Linum usitatissimum
Lus10017340.g
I
0.888
Lus10001664.g
Linum usitatissimum
Lus10001664.g
I
0.888
cassava32649.m1
Manihot esculenta
cassava32649.m1
I
0.887
SapurV1A.0907s0070
Salix purpurea
SapurV1A.0907s0070
I
0.886
Lus10008271.g
Linum usitatissimum
Lus10008271.g
I
0.885
Lus10033239.g
Linum usitatissimum
Lus10033239.g
I
0.885
GSMUA_Achr3G12230_001
Musa acuminata
GSMUA_Achr3G12230_001
I
0.884
Thhalv10009336m.g
Eutrema salsugineum
Thhalv10009336m.g
I
0.883
Cagra.14513s0001
Capsella grandiflora
Cagra.14513s0001
I
0.883
Carubv10011900m.g
Capsella rubella
Carubv10011900m.g
I
0.883
ANAC012
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1002619
I
0.883
Gorai.008G130300
Gossypium raimondii
Gorai.008G130300
I
0.883
NAC012
Arabidopsis thaliana
AT1G32770
D
0.883
VIT_15s0048g02660
Vitis vinifera
VIT_15s0048g02660
I
0.882
Bo5g049360
Brassica oleracea
Bo5g049360
I
0.882
Bostr.3359s0081
Boechera stricta
Bostr.3359s0081
I
0.882
POPTR_0019s09400
Populus trichocarpa
POPTR_0019s09400
I
0.881
PDK_20s1408241g001
Phoenix dactylifera
PDK_20s1408241g001
I
0.881
GSMUA_Achr9G24450_001
Musa acuminata
GSMUA_Achr9G24450_001
I
0.879
Bra023288
Brassica rapa
Bra023288
I
0.878
PDK_20s1484021g001
Phoenix dactylifera
PDK_20s1484021g001
N
0.877
Aquca_037_00272
Aquilegia coerulea
Aquca_037_00272
I
0.876
Gorai.006G205300
Gossypium raimondii
Gorai.006G205300
I
0.876
orange1.1g015853m.g
Citrus sinensis
orange1.1g015853m.g
I
0.871
Ciclev10024035m.g
Citrus clementina
Ciclev10024035m.g
I
0.871
ANAC012
Vitis vinifera
VIT_02s0025g02710
I
0.870