CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400005807
(
Solanum tuberosum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
PGSC0003DMG400005807
T295105_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MDP0000762302
M02383_2.00
Malus domestica
NNNAMKHNWN
NWNDMKTNNN
PBM
Weirauch et al.(2014)
pTH9205
0.878
0.836
NAC012
M00971_2.00
Arabidopsis thaliana
NYAMGYHANN
NNTDRCKTRN
PBM
Lindemose et al.(2014)
SND1
0.883
0.821
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400014871
NAC/NAM
12
134
PPGFRFHPTEEELLHYYLRKKIANEKIDLDVIREVDLNKLEPWDIQGSTPQNDWYLFSHKDKKYPSGSRTNRATAAGFWKATGRDKVIYGNCKRIGMRKTLVFYKGRAPHGLKLDWIMHEYRL
PGSC0003DMT400014872
NAC/NAM
12
139
PPGFRFHPTEEELLHYYLRKKIANEKIDLDVIREVDLNKLEPWDIQEKCKIGSTPQNDWYLFSHKDKKYPSGSRTNRATAAGFWKATGRDKVIYGNCKRIGMRKTLVFYKGRAPHGLKLDWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Solanum tuberosum
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy