PGSC0003DMG400018435 (Solanum tuberosum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 PGSC0003DMG400018435 T295135_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC029
M00973_2.00
Arabidopsis thaliana
NBACGBMWNN

NNWKVCGTVN
PBM
Lindemose et al.(2014)
NAP
0.937 0.866
NAC029
M02369_2.00
Arabidopsis thaliana
NRGTCAWNN

NNWTGACYN
PBM
Weirauch et al.(2014)
pTH8397
0.937 0.866
NAC029
M07180_2.00
Arabidopsis thaliana
NCGTVHNNNWYACGBMA

TKVCGTRWNNNDBACGN
Dap-seq
OMalley et al.(2016)
NAP_colamp_a
0.937 0.866
NAC029
M07181_2.00
Arabidopsis thaliana
WYACGBMAYYD

HRRTKVCGTRW
Dap-seq
OMalley et al.(2016)
NAP_col_v3a
0.937 0.866
Traes_5BL_CC18CAD72
M11085_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC691_01
0.884 0.741
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400047440 NAC/NAM 10 134

Links

Other NAC/NAM family TFs
Other Solanum tuberosum TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
NAC029 Arabidopsis thaliana AT1G69490 D 0.937
Traes_5BL_CC18CAD72 Triticum aestivum Traes_5BL_CC18CAD72 D 0.884
Eucgr.G02486 Eucalyptus grandis Eucgr.G02486 I 0.959
Eucgr.B03208 Eucalyptus grandis Eucgr.B03208 I 0.922
Ciclev10032304m.g Citrus clementina Ciclev10032304m.g I 0.962
Carubv10020776m.g Capsella rubella Carubv10020776m.g I 0.937
Cagra.0887s0008 Capsella grandiflora Cagra.0887s0008 I 0.937
Bostr.10273s0418 Boechera stricta Bostr.10273s0418 I 0.937
Aquca_002_00663 Aquilegia coerulea Aquca_002_00663 I 0.937
mgf022118m Mimulus guttatus mgf022118m I 0.962
mgf016848m Mimulus guttatus mgf016848m I 0.940
Cucsa.284890 Cucumis sativus Cucsa.284890 I 0.956
cassava1317.valid.m1 Manihot esculenta cassava1317.valid.m1 I 0.960
29813.m001519 Ricinus communis 29813.m001519 I 0.962
Pm006470 Prunus mume Pm006470 I 0.964
evm.TU.supercontig_1.48 Carica papaya evm.TU.supercontig_1.48 I 0.939
Gorai.005G142300 Gossypium raimondii Gorai.005G142300 I 0.959
Gorai.008G179900 Gossypium raimondii Gorai.008G179900 I 0.960
chr2.CM0641.320.nc Lotus japonicus chr2.CM0641.320.nc I 0.888
PK25119.1 Cannabis sativa PK25119.1 I 0.962
Thhalv10018997m.g Eutrema salsugineum Thhalv10018997m.g I 0.937
SapurV1A.0801s0090 Salix purpurea SapurV1A.0801s0090 I 0.962
SapurV1A.0063s0620 Salix purpurea SapurV1A.0063s0620 I 0.940
SapurV1A.0063s0610 Salix purpurea SapurV1A.0063s0610 I 0.940
Pavir.J23516 Panicum virgatum Pavir.J23516 I 0.871
orange1.1g023197m.g Citrus sinensis orange1.1g023197m.g I 0.962
MDP0000481448 Malus domestica MDP0000481448 I 0.964
MDP0000262990 Malus domestica MDP0000262990 I 0.968
Lus10037156.g Linum usitatissimum Lus10037156.g I 0.956
Lus10036773.g Linum usitatissimum Lus10036773.g I 0.961
Lus10030446.g Linum usitatissimum Lus10030446.g I 0.926
Lus10026617.g Linum usitatissimum Lus10026617.g I 0.926
Cla010367 Citrullus lanatus Cla010367 I 0.956
Ca_18090 Cicer arietinum Ca_18090 I 0.935
OB11G11210 Oryza brachyantha OB11G11210 I 0.876
MTR_5g041940 Medicago truncatula MTR_5g041940 I 0.921
MTR_4g081870 Medicago truncatula MTR_4g081870 I 0.950
MLOC_4747 Hordeum vulgare MLOC_4747 I 0.884
GSMUA_Achr6G32320_001 Musa acuminata GSMUA_Achr6G32320_001 I 0.879
GLYMA20G04400 Glycine max GLYMA20G04400 I 0.951
GLYMA07G35630 Glycine max GLYMA07G35630 I 0.949
GLYMA02G12220 Glycine max GLYMA02G12220 I 0.950
GLYMA01G06150 Glycine max GLYMA01G06150 I 0.948
NAP Arabidopsis lyrata fgenesh2_kg.2__1206__AT1G69490.1 I 0.937
F775_26965 Aegilops tauschii F775_26965 I 0.884
Bra004385 Brassica rapa Bra004385 I 0.940
Bo6g108930 Brassica oleracea Bo6g108930 I 0.940
OB12G11500 Oryza brachyantha OB12G11500 I 0.878
OPUNC11G01330 Oryza punctata OPUNC11G01330 I 0.884
OPUNC12G01370 Oryza punctata OPUNC12G01370 I 0.884
Ca_16379 Cicer arietinum Ca_16379 I 0.936
NAP Vitis vinifera VIT_01s0026g02710 I 0.961
TCM_011671 Theobroma cacao TCM_011671 I 0.946
Solyc05g007770.2 Solanum lycopersicum Solyc05g007770.2 I 0.965
Solyc04g005610.2 Solanum lycopersicum Solyc04g005610.2 I 0.945
Si026530m.g Setaria italica Si026530m.g I 0.876
Si010410m.g Setaria italica Si010410m.g I 0.879
Sb08g001940 Sorghum bicolor Sb08g001940 I 0.874
Sb05g001580 Sorghum bicolor Sb05g001580 I 0.875
PRUPE_ppa009530mg Prunus persica PRUPE_ppa009530mg I 0.964
POPTR_0010s17350 Populus trichocarpa POPTR_0010s17350 I 0.931
POPTR_0008s08850 Populus trichocarpa POPTR_0008s08850 I 0.960
PGSC0003DMG400002824 Solanum tuberosum PGSC0003DMG400002824 I 0.960
Bo6g095510 Brassica oleracea Bo6g095510 I 0.926