POPTR_0001s02710 (Populus trichocarpa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 POPTR_0001s02710 T295202_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
anac071
M07219_2.00
Arabidopsis thaliana
CTTSHNNYHCAMGYW

WRCKTGDRNNDSAAG
Dap-seq
OMalley et al.(2016)
ANAC071_col_a
0.920 0.870
anac071
M07220_2.00
Arabidopsis thaliana
CTTSHNNNNSAMGYA

TRCKTSNNNNDSAAG
Dap-seq
OMalley et al.(2016)
ANAC071_colamp_a
0.920 0.870
anac096
M07237_2.00
Arabidopsis thaliana
CTTSHNNNNBAMGHAAYC

GRTTDCKTVNNNNDSAAG
Dap-seq
OMalley et al.(2016)
ANAC096_colamp_a
0.917 0.787
anac096
M07238_2.00
Arabidopsis thaliana
TTNCTTSWNNHNYAMG

CKTRNDNNWSAAGNAA
Dap-seq
OMalley et al.(2016)
ANAC096_col
0.917 0.787
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0001s02710.1 NAC/NAM 7 133

Links

Other NAC/NAM family TFs
Other Populus trichocarpa TFs

83 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SapurV1A.0900s0060 Salix purpurea SapurV1A.0900s0060 I 0.963
cassava22941.valid.m1 Manihot esculenta cassava22941.valid.m1 I 0.962
POPTR_0003s08830 Populus trichocarpa POPTR_0003s08830 I 0.961
gene10722-v1.0-hybrid Fragaria vesca gene10722-v1.0-hybrid I 0.961
MDP0000936269 Malus domestica MDP0000936269 I 0.961
SapurV1A.0846s0080 Salix purpurea SapurV1A.0846s0080 I 0.961
Cucsa.313350 Cucumis sativus Cucsa.313350 I 0.960
Cla016424 Citrullus lanatus Cla016424 I 0.959
Eucgr.D02182 Eucalyptus grandis Eucgr.D02182 I 0.958
PRUPE_ppa007828mg Prunus persica PRUPE_ppa007828mg I 0.957
Ciclev10031966m.g Citrus clementina Ciclev10031966m.g I 0.957
Gorai.008G227800 Gossypium raimondii Gorai.008G227800 I 0.957
PK00339.1 Cannabis sativa PK00339.1 I 0.957
orange1.1g018835m.g Citrus sinensis orange1.1g018835m.g I 0.957
Lus10035373.g Linum usitatissimum Lus10035373.g I 0.957
Pm023277 Prunus mume Pm023277 I 0.957
29827.m002555 Ricinus communis 29827.m002555 I 0.956
Gorai.004G186700 Gossypium raimondii Gorai.004G186700 I 0.956
Lus10030978.g Linum usitatissimum Lus10030978.g I 0.956
Solyc08g077110.2 Solanum lycopersicum Solyc08g077110.2 I 0.954
MTR_5g014300 Medicago truncatula MTR_5g014300 I 0.954
PGSC0003DMG400017505 Solanum tuberosum PGSC0003DMG400017505 I 0.949
GLYMA05G23840 Glycine max GLYMA05G23840 I 0.949
evm.TU.supercontig_90.52 Carica papaya evm.TU.supercontig_90.52 I 0.946
TCM_015749 Theobroma cacao TCM_015749 I 0.946
GLYMA17G16500 Glycine max GLYMA17G16500 I 0.946
Eucgr.E00298 Eucalyptus grandis Eucgr.E00298 I 0.945
VIT_02s0012g01040 Vitis vinifera VIT_02s0012g01040 I 0.945
Gorai.007G031300 Gossypium raimondii Gorai.007G031300 I 0.944
Cagra.3356s0092 Capsella grandiflora Cagra.3356s0092 I 0.941
Gorai.003G180600 Gossypium raimondii Gorai.003G180600 I 0.940
Ca_12837 Cicer arietinum Ca_12837 I 0.939
OB10G26350 Oryza brachyantha OB10G26350 I 0.936
Ca_02274 Cicer arietinum Ca_02274 I 0.935
Bra025012 Brassica rapa Bra025012 I 0.935
anac096 Arabidopsis lyrata fgenesh2_kg.8__135__AT5G46590.1 I 0.935
Bo7g075540 Brassica oleracea Bo7g075540 I 0.935
Thhalv10001200m.g Eutrema salsugineum Thhalv10001200m.g I 0.935
OPUNC10G17630 Oryza punctata OPUNC10G17630 I 0.933
ORGLA10G0144100 Oryza glaberrima ORGLA10G0144100 I 0.933
ONIVA10G21790 Oryza nivara ONIVA10G21790 I 0.933
OLONG_018722 Oryza longistaminata OLONG_018722 I 0.933
OBART10G19230 Oryza barthii OBART10G19230 I 0.933
OGLUM10G19330 Oryza glumaepatula OGLUM10G19330 I 0.933
OMERI07G08100 Oryza meridionalis OMERI07G08100 I 0.933
ORUFI10G20470 Oryza rufipogon ORUFI10G20470 I 0.933
BGIOSGA033482 Oryza indica BGIOSGA033482 I 0.933
Bra022046 Brassica rapa Bra022046 I 0.933
Carubv10028284m.g Capsella rubella Carubv10028284m.g I 0.932
Cagra.0569s0030 Capsella grandiflora Cagra.0569s0030 I 0.932
BRADI3G33957 Brachypodium distachyon BRADI3G33957 I 0.931
LPERR10G15090 Leersia perrieri LPERR10G15090 I 0.931
Carubv10007390m.g Capsella rubella Carubv10007390m.g I 0.929
Si036301m.g Setaria italica Si036301m.g I 0.929
Pavir.Ia03491 Panicum virgatum Pavir.Ia03491 I 0.929
Sb01g028450 Sorghum bicolor Sb01g028450 I 0.929
GSMUA_Achr5G03360_001 Musa acuminata GSMUA_Achr5G03360_001 I 0.928
anac071 Arabidopsis lyrata Al_scaffold_0007_2395 I 0.928
Bostr.30275s0267 Boechera stricta Bostr.30275s0267 I 0.927
GRMZM2G082709 Zea mays GRMZM2G082709 I 0.926
Bo1g019130 Brassica oleracea Bo1g019130 I 0.923
Bra013272 Brassica rapa Bra013272 I 0.923
Bo7g105630 Brassica oleracea Bo7g105630 I 0.922
Bo2g130240 Brassica oleracea Bo2g130240 I 0.922
F775_28577 Aegilops tauschii F775_28577 I 0.922
MLOC_58950 Hordeum vulgare MLOC_58950 I 0.922
Traes_1AL_D6C49C3BC Triticum aestivum Traes_1AL_D6C49C3BC I 0.922
Traes_1BL_8925B27BC Triticum aestivum Traes_1BL_8925B27BC I 0.922
anac071 Arabidopsis thaliana AT4G17980 D 0.920
Solyc06g061080.2 Solanum lycopersicum Solyc06g061080.2 I 0.920
Bra012626 Brassica rapa Bra012626 I 0.919
AMTR_s00149p00068500 Amborella trichopoda AMTR_s00149p00068500 I 0.918
anac096 Arabidopsis thaliana AT5G46590 D 0.917
Pavir.Ib02435 Panicum virgatum Pavir.Ib02435 I 0.913
chr2.CM0021.650.nc Lotus japonicus chr2.CM0021.650.nc I 0.913
TRIUR3_22131 Triticum urartu TRIUR3_22131 I 0.908
MDP0000119446 Malus domestica MDP0000119446 I 0.906
MTR_4g098630 Medicago truncatula MTR_4g098630 I 0.900
Aquca_044_00122 Aquilegia coerulea Aquca_044_00122 I 0.893
GSMUA_Achr11G17780_001 Musa acuminata GSMUA_Achr11G17780_001 I 0.885
Thhalv10027064m.g Eutrema salsugineum Thhalv10027064m.g I 0.884
mgf019012m Mimulus guttatus mgf019012m I 0.882
Bostr.4485s0006 Boechera stricta Bostr.4485s0006 I 0.881