POPTR_0011s12420 (Populus trichocarpa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 POPTR_0011s12420 T295301_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC025
M02368_2.00
Arabidopsis thaliana
YACGYAAY

RTTRCGTR
PBM
Weirauch et al.(2014)
pTH7656
0.933 0.875
NAC018
M07176_2.00
Arabidopsis thaliana
DYACGBMAYYD

HRRTKVCGTRH
Dap-seq
OMalley et al.(2016)
NAM_colamp_a
0.921 0.848
NAC018
M07177_2.00
Arabidopsis thaliana
WDNCKWNHNNNWYACGBMA

TKVCGTRWNNNDNWMGNHW
Dap-seq
OMalley et al.(2016)
NAM_col_v3a
0.921 0.848
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0011s12420.1 NAC/NAM 24 150

Links

Other NAC/NAM family TFs
Other Populus trichocarpa TFs

271 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
27961.m000091 Ricinus communis 27961.m000091 I 0.962
29648.m002012 Ricinus communis 29648.m002012 I 0.891
29851.m002359 Ricinus communis 29851.m002359 I 0.958
AMTR_s00003p00252470 Amborella trichopoda AMTR_s00003p00252470 I 0.956
AMTR_s00009p00259320 Amborella trichopoda AMTR_s00009p00259320 I 0.894
AMTR_s00119p00040230 Amborella trichopoda AMTR_s00119p00040230 I 0.895
anac025 Vitis vinifera VIT_00s0375g00040 I 0.936
anac025 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000277 I 0.933
anac032 Arabidopsis lyrata scaffold_202708.1 I 0.879
Aquca_014_00255 Aquilegia coerulea Aquca_014_00255 I 0.871
Aquca_024_00081 Aquilegia coerulea Aquca_024_00081 I 0.939
Aquca_027_00052 Aquilegia coerulea Aquca_027_00052 I 0.916
Aquca_059_00027 Aquilegia coerulea Aquca_059_00027 I 0.951
ATAF2 Arabidopsis lyrata scaffold_600916.1 I 0.877
ATNAC2 Arabidopsis lyrata fgenesh2_kg.3__1698__AT3G15510.1 I 0.952
BGIOSGA000598 Oryza indica BGIOSGA000598 I 0.882
Bo01282s010 Brassica oleracea Bo01282s010 I 0.934
Bo02109s010 Brassica oleracea Bo02109s010 I 0.879
Bo1g128420 Brassica oleracea Bo1g128420 I 0.933
Bo2g009250 Brassica oleracea Bo2g009250 I 0.879
Bo2g092550 Brassica oleracea Bo2g092550 I 0.875
Bo3g066880 Brassica oleracea Bo3g066880 I 0.889
Bo5g127030 Brassica oleracea Bo5g127030 I 0.950
Bo6g030920 Brassica oleracea Bo6g030920 I 0.900
Bo9g174170 Brassica oleracea Bo9g174170 I 0.879
Bostr.0124s0081 Boechera stricta Bostr.0124s0081 I 0.921
Bostr.10040s0089 Boechera stricta Bostr.10040s0089 I 0.933
Bostr.13129s0073 Boechera stricta Bostr.13129s0073 I 0.879
Bostr.20129s0180 Boechera stricta Bostr.20129s0180 I 0.877
Bostr.28625s0148 Boechera stricta Bostr.28625s0148 I 0.952
Bra001597 Brassica rapa Bra001597 I 0.940
Bra008309 Brassica rapa Bra008309 I 0.875
Bra018997 Brassica rapa Bra018997 I 0.900
Bra021114 Brassica rapa Bra021114 I 0.933
Bra027101 Brassica rapa Bra027101 I 0.934
Bra027237 Brassica rapa Bra027237 I 0.952
Bra028645 Brassica rapa Bra028645 I 0.879
BRADI1G24390 Brachypodium distachyon BRADI1G24390 I 0.944
BRADI2G53260 Brachypodium distachyon BRADI2G53260 I 0.875
Cagra.0096s0087 Capsella grandiflora Cagra.0096s0087 I 0.879
Cagra.0946s0024 Capsella grandiflora Cagra.0946s0024 I 0.909
Cagra.1365s0094 Capsella grandiflora Cagra.1365s0094 I 0.872
Cagra.2213s0001 Capsella grandiflora Cagra.2213s0001 I 0.933
Cagra.27949s0001 Capsella grandiflora Cagra.27949s0001 I 0.930
Carubv10003254m.g Capsella rubella Carubv10003254m.g I 0.872
Carubv10009524m.g Capsella rubella Carubv10009524m.g I 0.909
Carubv10014008m.g Capsella rubella Carubv10014008m.g I 0.952
Carubv10020834m.g Capsella rubella Carubv10020834m.g I 0.879
Carubv10021371m.g Capsella rubella Carubv10021371m.g I 0.933
cassava26728.m1 Manihot esculenta cassava26728.m1 I 0.903
cassava3577.m1 Manihot esculenta cassava3577.m1 I 0.898
cassava42314.valid.m1 Manihot esculenta cassava42314.valid.m1 I 0.959
cassava5169.m1 Manihot esculenta cassava5169.m1 I 0.962
Ca_06901 Cicer arietinum Ca_06901 I 0.962
Ca_12031 Cicer arietinum Ca_12031 I 0.886
Ca_12660 Cicer arietinum Ca_12660 I 0.900
Ca_16379 Cicer arietinum Ca_16379 I 0.872
Ca_16946 Cicer arietinum Ca_16946 I 0.884
Ca_19654 Cicer arietinum Ca_19654 I 0.941
chr1.CM0033.600.nc Lotus japonicus chr1.CM0033.600.nc I 0.888
chr3.CM0111.130.nd Lotus japonicus chr3.CM0111.130.nd I 0.897
Ciclev10001956m.g Citrus clementina Ciclev10001956m.g I 0.881
Ciclev10001976m.g Citrus clementina Ciclev10001976m.g I 0.890
Ciclev10008628m.g Citrus clementina Ciclev10008628m.g I 0.960
Ciclev10015688m.g Citrus clementina Ciclev10015688m.g I 0.960
Cla011948 Citrullus lanatus Cla011948 I 0.959
Cla014135 Citrullus lanatus Cla014135 I 0.876
Cla019771 Citrullus lanatus Cla019771 I 0.921
Cla023536 Citrullus lanatus Cla023536 I 0.880
Cla023771 Citrullus lanatus Cla023771 I 0.940
Cucsa.060600 Cucumis sativus Cucsa.060600 I 0.876
Cucsa.074600 Cucumis sativus Cucsa.074600 I 0.959
Cucsa.125330 Cucumis sativus Cucsa.125330 I 0.874
Cucsa.126450 Cucumis sativus Cucsa.126450 I 0.892
Cucsa.228100 Cucumis sativus Cucsa.228100 I 0.882
Cucsa.341790 Cucumis sativus Cucsa.341790 I 0.940
Eucgr.D00665 Eucalyptus grandis Eucgr.D00665 I 0.902
Eucgr.F01091 Eucalyptus grandis Eucgr.F01091 I 0.956
Eucgr.I00056 Eucalyptus grandis Eucgr.I00056 I 0.884
Eucgr.I00057 Eucalyptus grandis Eucgr.I00057 I 0.881
Eucgr.I00058 Eucalyptus grandis Eucgr.I00058 I 0.884
Eucgr.I00095 Eucalyptus grandis Eucgr.I00095 I 0.878
Eucgr.K01471 Eucalyptus grandis Eucgr.K01471 N 0.889
evm.TU.supercontig_27.81 Carica papaya evm.TU.supercontig_27.81 I 0.958
evm.TU.supercontig_80.94 Carica papaya evm.TU.supercontig_80.94 I 0.962
e_gw1.117.35.1 Physcomitrella patens e_gw1.117.35.1 I 0.884
e_gw1.140.53.1 Physcomitrella patens e_gw1.140.53.1 I 0.889
e_gw1.164.18.1 Physcomitrella patens e_gw1.164.18.1 I 0.887
e_gw1.164.26.1 Physcomitrella patens e_gw1.164.26.1 I 0.885
e_gw1.259.28.1 Physcomitrella patens e_gw1.259.28.1 I 0.890
e_gw1.259.4.1 Physcomitrella patens e_gw1.259.4.1 I 0.886
e_gw1.5.134.1 Physcomitrella patens e_gw1.5.134.1 I 0.871
F775_14365 Aegilops tauschii F775_14365 I 0.936
F775_16000 Aegilops tauschii F775_16000 I 0.937
gene11226-v1.0-hybrid Fragaria vesca gene11226-v1.0-hybrid I 0.888
gene30439-v1.0-hybrid Fragaria vesca gene30439-v1.0-hybrid I 0.954
gene31150-v1.0-hybrid Fragaria vesca gene31150-v1.0-hybrid I 0.944
GLYMA02G26480 Glycine max GLYMA02G26480 I 0.890
GLYMA03G33690 Glycine max GLYMA03G33690 I 0.888
GLYMA04G42800 Glycine max GLYMA04G42800 I 0.879
GLYMA05G15533 Glycine max GLYMA05G15533 I 0.892
GLYMA06G11970 Glycine max GLYMA06G11970 I 0.915
GLYMA06G38440 Glycine max GLYMA06G38440 I 0.906
GLYMA07G31220 Glycine max GLYMA07G31220 I 0.934
GLYMA12G21272 Glycine max GLYMA12G21272 I 0.887
GLYMA12G22790 Glycine max GLYMA12G22790 I 0.914
GLYMA12G29360 Glycine max GLYMA12G29360 I 0.898
GLYMA12G34990 Glycine max GLYMA12G34990 I 0.961
GLYMA13G31660 Glycine max GLYMA13G31660 I 0.941
GLYMA13G35560 Glycine max GLYMA13G35560 I 0.951
GLYMA13G40251 Glycine max GLYMA13G40251 I 0.895
GLYMA15G07620 Glycine max GLYMA15G07620 I 0.929
GLYMA16G04740 Glycine max GLYMA16G04740 I 0.890
GLYMA16G26740 Glycine max GLYMA16G26740 I 0.874
GLYMA19G28476 Glycine max GLYMA19G28476 I 0.896
GLYMA19G36421 Glycine max GLYMA19G36421 I 0.893
Gorai.002G073800 Gossypium raimondii Gorai.002G073800 I 0.962
Gorai.009G170700 Gossypium raimondii Gorai.009G170700 I 0.958
Gorai.009G418700 Gossypium raimondii Gorai.009G418700 I 0.884
Gorai.009G433100 Gossypium raimondii Gorai.009G433100 I 0.962
Gorai.010G151400 Gossypium raimondii Gorai.010G151400 I 0.893
Gorai.013G167100 Gossypium raimondii Gorai.013G167100 I 0.961
GRMZM2G068973 Zea mays GRMZM2G068973 I 0.888
GRMZM2G109627 Zea mays GRMZM2G109627 I 0.905
GRMZM2G179885 Zea mays GRMZM2G179885 I 0.950
GSMUA_Achr10G04570_001 Musa acuminata GSMUA_Achr10G04570_001 I 0.899
GSMUA_Achr10G29200_001 Musa acuminata GSMUA_Achr10G29200_001 I 0.879
GSMUA_Achr1G08860_001 Musa acuminata GSMUA_Achr1G08860_001 I 0.929
GSMUA_Achr3G18010_001 Musa acuminata GSMUA_Achr3G18010_001 I 0.887
GSMUA_Achr3G18990_001 Musa acuminata GSMUA_Achr3G18990_001 I 0.880
GSMUA_Achr4G02380_001 Musa acuminata GSMUA_Achr4G02380_001 I 0.921
GSMUA_Achr6G25380_001 Musa acuminata GSMUA_Achr6G25380_001 I 0.891
GSMUA_Achr6G32320_001 Musa acuminata GSMUA_Achr6G32320_001 I 0.904
GSMUA_Achr6G32330_001 Musa acuminata GSMUA_Achr6G32330_001 I 0.897
GSMUA_Achr7G21770_001 Musa acuminata GSMUA_Achr7G21770_001 I 0.915
GSMUA_Achr7G23250_001 Musa acuminata GSMUA_Achr7G23250_001 I 0.873
GSMUA_Achr9G19520_001 Musa acuminata GSMUA_Achr9G19520_001 I 0.933
GSMUA_AchrUn_randomG17360_001 Musa acuminata GSMUA_AchrUn_randomG17360_001 I 0.893
LjSGA_023894.2 Lotus japonicus LjSGA_023894.2 I 0.959
LjSGA_036741.1 Lotus japonicus LjSGA_036741.1 I 0.936
LjT04N09.140.nd Lotus japonicus LjT04N09.140.nd I 0.898
LPERR01G00250 Leersia perrieri LPERR01G00250 I 0.903
LPERR01G30200 Leersia perrieri LPERR01G30200 I 0.882
LPERR03G32860 Leersia perrieri LPERR03G32860 I 0.871
LPERR07G16320 Leersia perrieri LPERR07G16320 I 0.934
Lus10007410.g Linum usitatissimum Lus10007410.g I 0.904
Lus10011215.g Linum usitatissimum Lus10011215.g I 0.919
Lus10018469.g Linum usitatissimum Lus10018469.g I 0.919
Lus10032657.g Linum usitatissimum Lus10032657.g I 0.959
Lus10036117.g Linum usitatissimum Lus10036117.g I 0.906
Lus10043095.g Linum usitatissimum Lus10043095.g I 0.959
MDP0000120881 Malus domestica MDP0000120881 I 0.945
MDP0000173636 Malus domestica MDP0000173636 I 0.942
MDP0000180683 Malus domestica MDP0000180683 I 0.898
MDP0000255884 Malus domestica MDP0000255884 N 0.871
MDP0000404409 Malus domestica MDP0000404409 I 0.888
MDP0000674514 Malus domestica MDP0000674514 I 0.947
MDP0000868419 Malus domestica MDP0000868419 I 0.961
mgf007362m Mimulus guttatus mgf007362m I 0.945
mgf016382m Mimulus guttatus mgf016382m I 0.945
mgf025001m Mimulus guttatus mgf025001m I 0.934
MLOC_63743 Hordeum vulgare MLOC_63743 I 0.876
MLOC_8116 Hordeum vulgare MLOC_8116 I 0.936
MTR_2157s0010 Medicago truncatula MTR_2157s0010 I 0.932
MTR_2g080010 Medicago truncatula MTR_2g080010 I 0.962
MTR_2g093810 Medicago truncatula MTR_2g093810 I 0.889
MTR_3g088110 Medicago truncatula MTR_3g088110 I 0.917
MTR_4g089135 Medicago truncatula MTR_4g089135 I 0.950
MTR_7g100990 Medicago truncatula MTR_7g100990 I 0.891
NAC018 Arabidopsis thaliana AT1G52880 D 0.921
NAC025 Arabidopsis thaliana AT1G61110 D 0.933
NAC032 Arabidopsis thaliana AT1G77450 I 0.879
NAC056 Arabidopsis thaliana AT3G15510 I 0.952
NAC081 Arabidopsis thaliana AT5G08790 I 0.879
NAC68 Oryza sativa OS01G0816100 I 0.882
NAM Arabidopsis lyrata fgenesh2_kg.1__4366__AT1G52880.1 I 0.917
OB01G43840 Oryza brachyantha OB01G43840 I 0.882
OB07G15670 Oryza brachyantha OB07G15670 I 0.872
OB07G24770 Oryza brachyantha OB07G24770 I 0.936
OBART01G35010 Oryza barthii OBART01G35010 I 0.882
OBART07G19010 Oryza barthii OBART07G19010 I 0.933
OGLUM01G39020 Oryza glumaepatula OGLUM01G39020 I 0.882
OGLUM07G18780 Oryza glumaepatula OGLUM07G18780 I 0.933
OLONG_002265 Oryza longistaminata OLONG_002265 I 0.936
OMERI01G32290 Oryza meridionalis OMERI01G32290 I 0.882
OMERI07G15720 Oryza meridionalis OMERI07G15720 I 0.936
ONAC010 Oryza sativa OS07G0566500 I 0.932
ONAC010 Oryza indica BGIOSGA024071 I 0.933
ONIVA01G39980 Oryza nivara ONIVA01G39980 I 0.882
ONIVA07G17340 Oryza nivara ONIVA07G17340 I 0.933
OPUNC01G00300 Oryza punctata OPUNC01G00300 I 0.874
OPUNC01G34000 Oryza punctata OPUNC01G34000 I 0.883
OPUNC07G07310 Oryza punctata OPUNC07G07310 I 0.880
OPUNC07G17890 Oryza punctata OPUNC07G17890 I 0.936
orange1.1g016791m.g Citrus sinensis orange1.1g016791m.g I 0.960
orange1.1g017854m.g Citrus sinensis orange1.1g017854m.g I 0.960
orange1.1g021910m.g Citrus sinensis orange1.1g021910m.g I 0.881
ORGLA01G0288400 Oryza glaberrima ORGLA01G0288400 I 0.882
ORGLA07G0243600 Oryza glaberrima ORGLA07G0243600 I 0.933
ORUFI01G38320 Oryza rufipogon ORUFI01G38320 I 0.882
ORUFI07G19770 Oryza rufipogon ORUFI07G19770 I 0.933
Pavir.Ba00642 Panicum virgatum Pavir.Ba00642 I 0.952
Pavir.Ea00837 Panicum virgatum Pavir.Ea00837 I 0.899
Pavir.Ea03233 Panicum virgatum Pavir.Ea03233 I 0.889
Pavir.Eb03542 Panicum virgatum Pavir.Eb03542 I 0.889
Pavir.Ha00897 Panicum virgatum Pavir.Ha00897 I 0.886
Pavir.J08552 Panicum virgatum Pavir.J08552 I 0.952
Pavir.J23256 Panicum virgatum Pavir.J23256 I 0.891
Pavir.J30396 Panicum virgatum Pavir.J30396 I 0.872
Pavir.J34979 Panicum virgatum Pavir.J34979 I 0.872
PGSC0003DMG400009245 Solanum tuberosum PGSC0003DMG400009245 I 0.882
PGSC0003DMG400017567 Solanum tuberosum PGSC0003DMG400017567 I 0.881
PGSC0003DMG400019293 Solanum tuberosum PGSC0003DMG400019293 I 0.952
PGSC0003DMG400025031 Solanum tuberosum PGSC0003DMG400025031 I 0.931
PK08629.1 Cannabis sativa PK08629.1 I 0.960
PK19059.1 Cannabis sativa PK19059.1 I 0.935
PK25206.1 Cannabis sativa PK25206.1 I 0.916
Pm004758 Prunus mume Pm004758 I 0.888
Pm009955 Prunus mume Pm009955 I 0.958
Pm011604 Prunus mume Pm011604 I 0.962
Pm025312 Prunus mume Pm025312 I 0.898
POPTR_0001s41490 Populus trichocarpa POPTR_0001s41490 I 0.970
POPTR_0002s08150 Populus trichocarpa POPTR_0002s08150 I 0.889
POPTR_0004s03820 Populus trichocarpa POPTR_0004s03820 I 0.954
POPTR_0005s20240 Populus trichocarpa POPTR_0005s20240 I 0.893
POPTR_0011s04650 Populus trichocarpa POPTR_0011s04650 I 0.954
PRUPE_ppa007314mg Prunus persica PRUPE_ppa007314mg I 0.958
PRUPE_ppa007445mg Prunus persica PRUPE_ppa007445mg I 0.898
PRUPE_ppa007577mg Prunus persica PRUPE_ppa007577mg I 0.962
PRUPE_ppa009380mg Prunus persica PRUPE_ppa009380mg I 0.888
PRUPE_ppa017586mg Prunus persica PRUPE_ppa017586mg N 0.873
SapurV1A.0044s0420 Salix purpurea SapurV1A.0044s0420 I 0.947
SapurV1A.0127s0010 Salix purpurea SapurV1A.0127s0010 I 0.970
SapurV1A.0299s0130 Salix purpurea SapurV1A.0299s0130 I 0.953
SapurV1A.0746s0010 Salix purpurea SapurV1A.0746s0010 I 0.970
SapurV1A.2174s0010 Salix purpurea SapurV1A.2174s0010 I 0.970
Sb02g036620 Sorghum bicolor Sb02g036620 I 0.950
Sb03g037940 Sorghum bicolor Sb03g037940 I 0.888
Sb09g020750 Sorghum bicolor Sb09g020750 I 0.876
SELMODRAFT_105213 Selaginella moellendorffii SELMODRAFT_105213 I 0.911
SELMODRAFT_108667 Selaginella moellendorffii SELMODRAFT_108667 I 0.905
SELMODRAFT_125697 Selaginella moellendorffii SELMODRAFT_125697 I 0.911
SELMODRAFT_133982 Selaginella moellendorffii SELMODRAFT_133982 I 0.888
SELMODRAFT_147012 Selaginella moellendorffii SELMODRAFT_147012 I 0.905
SELMODRAFT_47266 Selaginella moellendorffii SELMODRAFT_47266 I 0.888
Si002386m.g Setaria italica Si002386m.g N 0.872
Si026342m.g Setaria italica Si026342m.g I 0.872
Si032676m.g Setaria italica Si032676m.g I 0.942
Solyc06g060230.2 Solanum lycopersicum Solyc06g060230.2 I 0.889
Solyc07g063420.2 Solanum lycopersicum Solyc07g063420.2 I 0.952
Solyc10g006880.2 Solanum lycopersicum Solyc10g006880.2 I 0.904
TCM_029931 Theobroma cacao TCM_029931 I 0.956
TCM_031363 Theobroma cacao TCM_031363 I 0.962
TCM_041055 Theobroma cacao TCM_041055 I 0.900
Thhalv10008371m.g Eutrema salsugineum Thhalv10008371m.g I 0.890
Thhalv10012308m.g Eutrema salsugineum Thhalv10012308m.g I 0.908
Thhalv10014325m.g Eutrema salsugineum Thhalv10014325m.g I 0.877
Thhalv10018998m.g Eutrema salsugineum Thhalv10018998m.g I 0.879
Thhalv10022353m.g Eutrema salsugineum Thhalv10022353m.g I 0.952
Thhalv10023591m.g Eutrema salsugineum Thhalv10023591m.g I 0.931
TRAES3BF108700110CFD_g Triticum aestivum TRAES3BF108700110CFD_g I 0.933
Traes_2AS_09457EDD8 Triticum aestivum Traes_2AS_09457EDD8 I 0.936
Traes_2BS_58AA829F4 Triticum aestivum Traes_2BS_58AA829F4 I 0.933
Traes_2DS_5DF921ABB Triticum aestivum Traes_2DS_5DF921ABB I 0.937
Traes_6AS_6F89CC969 Triticum aestivum Traes_6AS_6F89CC969 I 0.936
Traes_6DS_90A627C3F Triticum aestivum Traes_6DS_90A627C3F I 0.936
TRIUR3_26867 Triticum urartu TRIUR3_26867 I 0.918
VIT_06s0004g03080 Vitis vinifera VIT_06s0004g03080 I 0.901
VIT_07s0031g02610 Vitis vinifera VIT_07s0031g02610 I 0.884
VIT_08s0040g02110 Vitis vinifera VIT_08s0040g02110 I 0.899
VIT_19s0014g03300 Vitis vinifera VIT_19s0014g03300 I 0.954