Sb01g049240 (Sorghum bicolor)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Sb01g049240 T295502_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK19314.1
M01291_2.00
Cannabis sativa
NNNNAMDNHW

WDNHKTNNNN
PBM
Lambert et al.(2019)
pTH11252
0.962 0.911
anac028
M01289_2.00
Arabidopsis thaliana
NTTGCGTRH

DYACGCAAN
PBM
Lambert et al.(2019)
pTH9962
0.952 0.903
anac028
M07179_2.00
Arabidopsis thaliana
CTTSHNNHDCAMGYWA

TWRCKTGHDNNDSAAG
Dap-seq
OMalley et al.(2016)
ANAC028_col_a
0.952 0.903
NAC045
M07194_2.00
Arabidopsis thaliana
TTNCTTSHNNNDCAMG

CKTGHNNNDSAAGNAA
Dap-seq
OMalley et al.(2016)
ANAC045_col_a
0.948 0.805
NAC045
M07195_2.00
Arabidopsis thaliana
TTNCTTSHNNNDCAMG

CKTGHNNNDSAAGNAA
Dap-seq
OMalley et al.(2016)
ANAC045_colamp_a
0.948 0.805
anac057
M07208_2.00
Arabidopsis thaliana
TNCKTGHNNNDCAMGYH

DRCKTGHNNNDCAMGNA
Dap-seq
OMalley et al.(2016)
ANAC057_col_a
0.945 0.779
anac057
M07209_2.00
Arabidopsis thaliana
WNCKTGHNNHDCAMGYHAYCD

HGRTDRCKTGHDNNDCAMGNW
Dap-seq
OMalley et al.(2016)
ANAC057_colamp_a
0.945 0.779
PK26618.1
M01292_2.00
Cannabis sativa
NNYAMGHHA

TDDCKTRNN
PBM
Lambert et al.(2019)
pTH11328
0.941 0.788
ANAC020
M07178_2.00
Arabidopsis thaliana
TTNCKTGHNNNDCAMGYHAHY

RDTDRCKTGHNNNDCAMGNAA
Dap-seq
OMalley et al.(2016)
ANAC020_col_v31
0.940 0.814
anac096
M07237_2.00
Arabidopsis thaliana
CTTSHNNNNBAMGHAAYC

GRTTDCKTVNNNNDSAAG
Dap-seq
OMalley et al.(2016)
ANAC096_colamp_a
0.886 0.664
anac096
M07238_2.00
Arabidopsis thaliana
TTNCTTSWNNHNYAMG

CKTRNDNNWSAAGNAA
Dap-seq
OMalley et al.(2016)
ANAC096_col
0.886 0.664
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb01g049240.1 NAC/NAM 7 133

Links

Other NAC/NAM family TFs
Other Sorghum bicolor TFs

218 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_31501 Aegilops tauschii F775_31501 I 0.000
Aquca_009_01006 Aquilegia coerulea Aquca_009_01006 I 0.000
Aquca_019_00072 Aquilegia coerulea Aquca_019_00072 I 0.000
fgenesh1_pm.C_scaffold_3000820 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3000820 I 0.000
AT3G10030 Arabidopsis thaliana AT3G10030 D 0.000
Bostr.22252s0062 Boechera stricta Bostr.22252s0062 I 0.000
BRADI5G08980 Brachypodium distachyon BRADI5G08980 I 0.000
Bo5g137800 Brassica oleracea Bo5g137800 I 0.000
Bra029812 Brassica rapa Bra029812 I 0.000
PK04914.1 Cannabis sativa PK04914.1 D 0.000
Cagra.4686s0014 Capsella grandiflora Cagra.4686s0014 I 0.000
Carubv10015256m.g Capsella rubella Carubv10015256m.g I 0.000
evm.TU.supercontig_128.55 Carica papaya evm.TU.supercontig_128.55 I 0.000
Ca_20148 Cicer arietinum Ca_20148 I 0.000
Cla018015 Citrullus lanatus Cla018015 I 0.000
Ciclev10011433m.g Citrus clementina Ciclev10011433m.g I 0.000
Cucsa.378670 Cucumis sativus Cucsa.378670 I 0.000
Eucgr.A01571 Eucalyptus grandis Eucgr.A01571 I 0.000
Thhalv10020471m.g Eutrema salsugineum Thhalv10020471m.g I 0.000
gene30101-v1.0-hybrid Fragaria vesca gene30101-v1.0-hybrid I 0.000
GLYMA10G34520 Glycine max GLYMA10G34520 I 0.000
GLYMA20G33031 Glycine max GLYMA20G33031 I 0.000
GLYMA10G07490 Glycine max GLYMA10G07490 I 0.000
GLYMA13G21371 Glycine max GLYMA13G21371 I 0.000
Gorai.007G371500 Gossypium raimondii Gorai.007G371500 I 0.000
MLOC_28975 Hordeum vulgare MLOC_28975 I 0.000
LPERR04G08300 Leersia perrieri LPERR04G08300 I 0.000
MDP0000415733 Malus domestica MDP0000415733 I 0.000
MDP0000399495 Malus domestica MDP0000399495 I 0.000
MDP0000201016 Malus domestica MDP0000201016 I 0.000
cassava30771.valid.m1 Manihot esculenta cassava30771.valid.m1 I 0.000
MTR_1g061600 Medicago truncatula MTR_1g061600 I 0.000
mgf008067m Mimulus guttatus mgf008067m I 0.000
GSMUA_Achr2G20220_001 Musa acuminata GSMUA_Achr2G20220_001 I 0.000
GSMUA_Achr6G13420_001 Musa acuminata GSMUA_Achr6G13420_001 I 0.000
OB04G18670 Oryza brachyantha OB04G18670 I 0.000
OGLUM04G11230 Oryza glumaepatula OGLUM04G11230 I 0.000
BGIOSGA016339 Oryza indica BGIOSGA016339 I 0.000
OMERI04G10080 Oryza meridionalis OMERI04G10080 I 0.000
ONIVA04G09510 Oryza nivara ONIVA04G09510 I 0.000
OPUNC04G09570 Oryza punctata OPUNC04G09570 I 0.000
Pavir.J13370 Panicum virgatum Pavir.J13370 I 0.000
Pavir.Gb01778 Panicum virgatum Pavir.Gb01778 I 0.000
POPTR_0006s11850 Populus trichocarpa POPTR_0006s11850 I 0.000
POPTR_0008s02730 Populus trichocarpa POPTR_0008s02730 I 0.000
POPTR_0010s23970 Populus trichocarpa POPTR_0010s23970 I 0.000
Pm026265 Prunus mume Pm026265 I 0.000
PRUPE_ppa004154mg Prunus persica PRUPE_ppa004154mg I 0.000
PRUPE_ppa022998mg Prunus persica PRUPE_ppa022998mg I 0.000
29815.m000504 Ricinus communis 29815.m000504 I 0.000
28077.m000081 Ricinus communis 28077.m000081 I 0.000
SapurV1A.0226s0070 Salix purpurea SapurV1A.0226s0070 I 0.000
SapurV1A.0439s0120 Salix purpurea SapurV1A.0439s0120 I 0.000
SapurV1A.0243s0300 Salix purpurea SapurV1A.0243s0300 I 0.000
Si009787m.g Setaria italica Si009787m.g I 0.000
Solyc09g008850.2 Solanum lycopersicum Solyc09g008850.2 I 0.000
PGSC0003DMG400002727 Solanum tuberosum PGSC0003DMG400002727 I 0.000
Sb06g015280 Sorghum bicolor Sb06g015280 I 0.000
TCM_022397 Theobroma cacao TCM_022397 I 0.000
Traes_2BL_83EDE2CBB Triticum aestivum Traes_2BL_83EDE2CBB I 0.000
Traes_2AL_246006E77 Triticum aestivum Traes_2AL_246006E77 I 0.000
TRIUR3_22240 Triticum urartu TRIUR3_22240 I 0.000
VIT_13s0074g00240 Vitis vinifera VIT_13s0074g00240 I 0.000
VIT_08s0007g04160 Vitis vinifera VIT_08s0007g04160 I 0.000
GRMZM2G002978 Zea mays GRMZM2G002978 I 0.000