CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb02g026510
(
Sorghum bicolor
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Sb02g026510
T295509_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT3G12910
M07204_2.00
Arabidopsis thaliana
YGSCGKNDNDDHNMCGB
VCGKNDHHNHNMCGSCR
Dap-seq
OMalley et al.(2016)
AT3G12910_col_a
0.904
0.374
NAC48
M11084_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC6_01
0.894
0.383
NAC002
M00970_2.00
Arabidopsis thaliana
NBACGYAWMN
NKWTRCGTVN
PBM
Lindemose et al.(2014)
ATAF1
0.880
0.374
NAC002
M07159_2.00
Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND
HNRWDDNMDWDWNNNWYACGBM
Dap-seq
OMalley et al.(2016)
ATAF1_col_a
0.880
0.374
NAC002
M07160_2.00
Arabidopsis thaliana
YACGY
RCGTR
Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a
0.880
0.374
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb02g026510.1
NAC/NAM
18
150
PIGFRFKPKDEELVEYYLVNRLTRQPTVPNDYITEYDVYLCHPDTLTKAEHKGVDQEEWYFLSPRSRMYGNGVRPARKTRDGRGRWKASTASKEVDQKVVCNGITFCRSVLNYFEGVPKKEVRTKWIMLELKV
Links
Other
NAC/NAM
family TFs
Other
Sorghum bicolor
TFs
190 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Si032881m.g
Setaria italica
Si032881m.g
N
0.978
Pavir.Ba02036
Panicum virgatum
Pavir.Ba02036
N
0.964
Pavir.Bb02323
Panicum virgatum
Pavir.Bb02323
N
0.963
LPERR04G17350
Leersia perrieri
LPERR04G17350
I
0.955
OPUNC04G19000
Oryza punctata
OPUNC04G19000
N
0.950
F775_00438
Aegilops tauschii
F775_00438
N
0.940
ONIVA05G14200
Oryza nivara
ONIVA05G14200
I
0.930
Pavir.Ib01528
Panicum virgatum
Pavir.Ib01528
I
0.926
Traes_5DL_B69423A67
Triticum aestivum
Traes_5DL_B69423A67
I
0.925
Traes_5BL_8BE382FE3
Triticum aestivum
Traes_5BL_8BE382FE3
I
0.925
TRIUR3_13805
Triticum urartu
TRIUR3_13805
I
0.925
MLOC_37843
Hordeum vulgare
MLOC_37843
I
0.925
Si036303m.g
Setaria italica
Si036303m.g
I
0.925
Eucgr.K02303
Eucalyptus grandis
Eucgr.K02303
I
0.924
evm.TU.contig_29561
Carica papaya
evm.TU.contig_29561
I
0.924
LPERR09G14720
Leersia perrieri
LPERR09G14720
I
0.922
BRADI4G37327
Brachypodium distachyon
BRADI4G37327
I
0.922
ORGLA09G0151800
Oryza glaberrima
ORGLA09G0151800
I
0.922
OMERI09G14170
Oryza meridionalis
OMERI09G14170
I
0.922
OGLUM09G19480
Oryza glumaepatula
OGLUM09G19480
I
0.922
ONIVA09G20130
Oryza nivara
ONIVA09G20130
I
0.922
OB09G25590
Oryza brachyantha
OB09G25590
I
0.922
BGIOSGA031230
Oryza indica
BGIOSGA031230
I
0.922
Si022723m.g
Setaria italica
Si022723m.g
I
0.921
Pavir.Ba01386
Panicum virgatum
Pavir.Ba01386
I
0.920
Si032702m.g
Setaria italica
Si032702m.g
I
0.920
Sb02g032230
Sorghum bicolor
Sb02g032230
I
0.920
Pavir.Bb02626
Panicum virgatum
Pavir.Bb02626
I
0.920
OPUNC10G03390
Oryza punctata
OPUNC10G03390
N
0.919
Pavir.Ia03443
Panicum virgatum
Pavir.Ia03443
I
0.919
Thhalv10012158m.g
Eutrema salsugineum
Thhalv10012158m.g
I
0.917
F775_13961
Aegilops tauschii
F775_13961
I
0.917
BRADI2G03467
Brachypodium distachyon
BRADI2G03467
I
0.915
gw1.1.690.1
Physcomitrella patens
gw1.1.690.1
I
0.914
Sb08g022560
Sorghum bicolor
Sb08g022560
I
0.913
Sb06g024980
Sorghum bicolor
Sb06g024980
N
0.912
SapurV1A.0093s0260
Salix purpurea
SapurV1A.0093s0260
I
0.912
PRUPE_ppa017765mg
Prunus persica
PRUPE_ppa017765mg
I
0.912
OGLUM08G21360
Oryza glumaepatula
OGLUM08G21360
I
0.910
OS08G0511200
Oryza sativa
OS08G0511200
I
0.910
ORGLA08G0177600
Oryza glaberrima
ORGLA08G0177600
I
0.910
ORUFI08G22550
Oryza rufipogon
ORUFI08G22550
I
0.910
LPERR11G01300
Leersia perrieri
LPERR11G01300
I
0.909
LPERR12G01440
Leersia perrieri
LPERR12G01440
I
0.909
BGIOSGA032231
Oryza indica
BGIOSGA032231
N
0.909
MLOC_59162
Hordeum vulgare
MLOC_59162
I
0.909
BGIOSGA026695
Oryza indica
BGIOSGA026695
I
0.909
ONIVA08G22710
Oryza nivara
ONIVA08G22710
I
0.909
GSMUA_Achr9G10040_001
Musa acuminata
GSMUA_Achr9G10040_001
I
0.909
MLOC_13932
Hordeum vulgare
MLOC_13932
I
0.908
MLOC_65286
Hordeum vulgare
MLOC_65286
I
0.908
GSMUA_Achr4G32010_001
Musa acuminata
GSMUA_Achr4G32010_001
I
0.908
OPUNC08G18240
Oryza punctata
OPUNC08G18240
I
0.908
GRMZM2G052239
Zea mays
GRMZM2G052239
I
0.907
MTR_2g068880
Medicago truncatula
MTR_2g068880
I
0.907
MTR_8g023840
Medicago truncatula
MTR_8g023840
I
0.907
GSMUA_Achr6G31580_001
Musa acuminata
GSMUA_Achr6G31580_001
I
0.905
GRMZM2G079632
Zea mays
GRMZM2G079632
I
0.904
TRAES3BF002300010CFD_g
Triticum aestivum
TRAES3BF002300010CFD_g
I
0.904
Gorai.005G088800
Gossypium raimondii
Gorai.005G088800
I
0.904
F775_28813
Aegilops tauschii
F775_28813
I
0.904
AT3G12910
Arabidopsis thaliana
AT3G12910
D
0.904
Sb02g006680
Sorghum bicolor
Sb02g006680
I
0.904
GRMZM2G162739
Zea mays
GRMZM2G162739
I
0.904
TRIUR3_14109
Triticum urartu
TRIUR3_14109
I
0.904
e_gw1.5.134.1
Physcomitrella patens
e_gw1.5.134.1
I
0.904
Pavir.Ea03621
Panicum virgatum
Pavir.Ea03621
I
0.903
VIT_06s0004g00020
Vitis vinifera
VIT_06s0004g00020
I
0.903
Thhalv10021225m.g
Eutrema salsugineum
Thhalv10021225m.g
I
0.902
Bo1g138800
Brassica oleracea
Bo1g138800
I
0.902
fgenesh2_kg.3__1353__AT3G12910.1
Arabidopsis lyrata
fgenesh2_kg.3__1353__AT3G12910.1
I
0.902
Bra039353
Brassica rapa
Bra039353
I
0.902
Bostr.3640s0064
Boechera stricta
Bostr.3640s0064
I
0.902
Pavir.Ba03301
Panicum virgatum
Pavir.Ba03301
I
0.902
Carubv10014270m.g
Capsella rubella
Carubv10014270m.g
I
0.901
Si030752m.g
Setaria italica
Si030752m.g
I
0.901
Cagra.5641s0055
Capsella grandiflora
Cagra.5641s0055
I
0.901
fgenesh1_pg.scaffold_182000024
Physcomitrella patens
fgenesh1_pg.scaffold_182000024
I
0.900
F775_20638
Aegilops tauschii
F775_20638
I
0.900
Pavir.Bb00806
Panicum virgatum
Pavir.Bb00806
I
0.900
Bostr.5325s0009
Boechera stricta
Bostr.5325s0009
I
0.900
Traes_7AL_74CC91D39
Triticum aestivum
Traes_7AL_74CC91D39
I
0.900
LPERR08G17020
Leersia perrieri
LPERR08G17020
I
0.900
Si010053m.g
Setaria italica
Si010053m.g
N
0.900
MTR_2g068920
Medicago truncatula
MTR_2g068920
I
0.900
AMTR_s00022p00160350
Amborella trichopoda
AMTR_s00022p00160350
I
0.899
GSMUA_Achr11G16860_001
Musa acuminata
GSMUA_Achr11G16860_001
I
0.898
AMTR_s00017p00255350
Amborella trichopoda
AMTR_s00017p00255350
I
0.898
BRADI2G57100
Brachypodium distachyon
BRADI2G57100
I
0.898
Ca_20988
Cicer arietinum
Ca_20988
I
0.897
mgf013201m
Mimulus guttatus
mgf013201m
I
0.897
ORUFI05G18190
Oryza rufipogon
ORUFI05G18190
I
0.897
GSMUA_Achr7G21780_001
Musa acuminata
GSMUA_Achr7G21780_001
I
0.896
SELMODRAFT_71307
Selaginella moellendorffii
SELMODRAFT_71307
I
0.895
Cla011742
Citrullus lanatus
Cla011742
I
0.895
SELMODRAFT_86855
Selaginella moellendorffii
SELMODRAFT_86855
I
0.895
LPERR07G06440
Leersia perrieri
LPERR07G06440
I
0.895
gw1.6.394.1
Physcomitrella patens
gw1.6.394.1
I
0.895
Thhalv10023502m.g
Eutrema salsugineum
Thhalv10023502m.g
I
0.895
Ca_13571
Cicer arietinum
Ca_13571
I
0.895
NAC026
Arabidopsis thaliana
AT1G62700
I
0.895
NAC48
Oryza sativa
OS01G0884300
D
0.894
OMERI01G36460
Oryza meridionalis
OMERI01G36460
I
0.894
ORGLA01G0334900
Oryza glaberrima
ORGLA01G0334900
I
0.894
ORUFI01G42940
Oryza rufipogon
ORUFI01G42940
I
0.894
Bo5g002850
Brassica oleracea
Bo5g002850
I
0.894
OBART01G39590
Oryza barthii
OBART01G39590
I
0.894
OGLUM01G43820
Oryza glumaepatula
OGLUM01G43820
I
0.894
ONIVA01G44460
Oryza nivara
ONIVA01G44460
I
0.894
OB01G48340
Oryza brachyantha
OB01G48340
I
0.894
Si002413m.g
Setaria italica
Si002413m.g
I
0.894
OPUNC01G38300
Oryza punctata
OPUNC01G38300
I
0.894
LPERR01G34090
Leersia perrieri
LPERR01G34090
I
0.894
Sb03g041920
Sorghum bicolor
Sb03g041920
I
0.894
GRMZM2G014653
Zea mays
GRMZM2G014653
I
0.894
BGIOSGA000374
Oryza indica
BGIOSGA000374
I
0.894
Bo5g002810
Brassica oleracea
Bo5g002810
I
0.892
OB05G24820
Oryza brachyantha
OB05G24820
I
0.891
ONIVA05G17670
Oryza nivara
ONIVA05G17670
I
0.890
e_gw1.164.18.1
Physcomitrella patens
e_gw1.164.18.1
I
0.890
BGIOSGA019897
Oryza indica
BGIOSGA019897
I
0.890
ORGLA05G0146600
Oryza glaberrima
ORGLA05G0146600
I
0.890
OGLUM05G17980
Oryza glumaepatula
OGLUM05G17980
I
0.890
Bostr.25375s0002
Boechera stricta
Bostr.25375s0002
I
0.889
Aquca_014_00255
Aquilegia coerulea
Aquca_014_00255
I
0.889
e_gw1.164.26.1
Physcomitrella patens
e_gw1.164.26.1
I
0.888
GSMUA_Achr6G18720_001
Musa acuminata
GSMUA_Achr6G18720_001
I
0.888
GRMZM2G475014
Zea mays
GRMZM2G475014
I
0.886
GRMZM2G139700
Zea mays
GRMZM2G139700
I
0.885
GSMUA_Achr4G02390_001
Musa acuminata
GSMUA_Achr4G02390_001
I
0.885
SapurV1A.0740s0040
Salix purpurea
SapurV1A.0740s0040
I
0.885
SapurV1A.3767s0010
Salix purpurea
SapurV1A.3767s0010
I
0.885
Bo9g004070
Brassica oleracea
Bo9g004070
I
0.885
LPERR05G13490
Leersia perrieri
LPERR05G13490
I
0.884
SapurV1A.0365s0200
Salix purpurea
SapurV1A.0365s0200
I
0.884
e_gw1.117.35.1
Physcomitrella patens
e_gw1.117.35.1
I
0.884
PK26157.1
Cannabis sativa
PK26157.1
I
0.884
MTR_1g008740
Medicago truncatula
MTR_1g008740
I
0.883
TCM_020121
Theobroma cacao
TCM_020121
I
0.883
anac032
Vitis vinifera
VIT_18s0001g02300
I
0.883
Pavir.J31204
Panicum virgatum
Pavir.J31204
I
0.883
AMTR_s00018p00071850
Amborella trichopoda
AMTR_s00018p00071850
I
0.883
Gorai.010G051900
Gossypium raimondii
Gorai.010G051900
I
0.882
Si022714m.g
Setaria italica
Si022714m.g
I
0.882
TCM_035160
Theobroma cacao
TCM_035160
I
0.882
Bra036328
Brassica rapa
Bra036328
I
0.882
e_gw1.140.53.1
Physcomitrella patens
e_gw1.140.53.1
I
0.882
OPUNC04G28220
Oryza punctata
OPUNC04G28220
I
0.881
e_gw1.259.4.1
Physcomitrella patens
e_gw1.259.4.1
I
0.881
OLONG_023103
Oryza longistaminata
OLONG_023103
I
0.881
Pavir.Gb01143
Panicum virgatum
Pavir.Gb01143
N
0.881
Solyc11g017470.1
Solanum lycopersicum
Solyc11g017470.1
I
0.880
Bra033239
Brassica rapa
Bra033239
I
0.880
Bostr.5325s0094
Boechera stricta
Bostr.5325s0094
I
0.880
NAC002
Arabidopsis thaliana
AT1G01720
D
0.880
Carubv10009926m.g
Capsella rubella
Carubv10009926m.g
I
0.880
Cagra.1968s0112
Capsella grandiflora
Cagra.1968s0112
I
0.880
GLYMA14G24220
Glycine max
GLYMA14G24220
I
0.880
cassava28909.valid.m1
Manihot esculenta
cassava28909.valid.m1
I
0.880
Bo5g001100
Brassica oleracea
Bo5g001100
I
0.880
Bostr.5325s0019
Boechera stricta
Bostr.5325s0019
I
0.880
Bra034719
Brassica rapa
Bra034719
I
0.879
Aquca_009_00966
Aquilegia coerulea
Aquca_009_00966
I
0.879
SELMODRAFT_71305
Selaginella moellendorffii
SELMODRAFT_71305
I
0.877
GSMUA_Achr10G08120_001
Musa acuminata
GSMUA_Achr10G08120_001
I
0.877
PGSC0003DMG400039898
Solanum tuberosum
PGSC0003DMG400039898
I
0.877
ONIVA08G03440
Oryza nivara
ONIVA08G03440
I
0.876
BGIOSGA027623
Oryza indica
BGIOSGA027623
I
0.876
ORUFI08G03870
Oryza rufipogon
ORUFI08G03870
I
0.876
OS08G0157900
Oryza sativa
OS08G0157900
I
0.876
SELMODRAFT_69090
Selaginella moellendorffii
SELMODRAFT_69090
I
0.876
ATAF1
Arabidopsis lyrata
scaffold_100066.1
I
0.874
Bra027596
Brassica rapa
Bra027596
I
0.874
POPTR_0002s18320
Populus trichocarpa
POPTR_0002s18320
I
0.874
SapurV1A.0076s0070
Salix purpurea
SapurV1A.0076s0070
I
0.873
Bo9g004110
Brassica oleracea
Bo9g004110
I
0.873
TCM_020127
Theobroma cacao
TCM_020127
N
0.873
OMERI04G25730
Oryza meridionalis
OMERI04G25730
I
0.873
SapurV1A.0003s0330
Salix purpurea
SapurV1A.0003s0330
I
0.872
SapurV1A.0059s0580
Salix purpurea
SapurV1A.0059s0580
I
0.872
Pavir.Gb01092
Panicum virgatum
Pavir.Gb01092
N
0.872
POPTR_0003s14950
Populus trichocarpa
POPTR_0003s14950
I
0.872
PGSC0003DMG400009920
Solanum tuberosum
PGSC0003DMG400009920
I
0.872
TRIUR3_29250
Triticum urartu
TRIUR3_29250
I
0.871
Cla023594
Citrullus lanatus
Cla023594
I
0.871
Bo3g065200
Brassica oleracea
Bo3g065200
I
0.871
Traes_7DL_BDD45DB24
Triticum aestivum
Traes_7DL_BDD45DB24
I
0.871
F775_30297
Aegilops tauschii
F775_30297
I
0.871
Pavir.Cb00167
Panicum virgatum
Pavir.Cb00167
I
0.871
Carubv10009451m.g
Capsella rubella
Carubv10009451m.g
I
0.871