Sb02g026510 (Sorghum bicolor)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Sb02g026510 T295509_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT3G12910
M07204_2.00
Arabidopsis thaliana
YGSCGKNDNDDHNMCGB

VCGKNDHHNHNMCGSCR
Dap-seq
OMalley et al.(2016)
AT3G12910_col_a
0.904 0.374
NAC48
M11084_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC6_01
0.894 0.383
NAC002
M00970_2.00
Arabidopsis thaliana
NBACGYAWMN

NKWTRCGTVN
PBM
Lindemose et al.(2014)
ATAF1
0.880 0.374
NAC002
M07159_2.00
Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND

HNRWDDNMDWDWNNNWYACGBM
Dap-seq
OMalley et al.(2016)
ATAF1_col_a
0.880 0.374
NAC002
M07160_2.00
Arabidopsis thaliana
YACGY

RCGTR
Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a
0.880 0.374
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb02g026510.1 NAC/NAM 18 150

Links

Other NAC/NAM family TFs
Other Sorghum bicolor TFs

190 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00017p00255350 Amborella trichopoda AMTR_s00017p00255350 I 0.898
AMTR_s00018p00071850 Amborella trichopoda AMTR_s00018p00071850 I 0.883
AMTR_s00022p00160350 Amborella trichopoda AMTR_s00022p00160350 I 0.899
anac032 Vitis vinifera VIT_18s0001g02300 I 0.883
Aquca_009_00966 Aquilegia coerulea Aquca_009_00966 I 0.879
Aquca_014_00255 Aquilegia coerulea Aquca_014_00255 I 0.889
AT3G12910 Arabidopsis thaliana AT3G12910 D 0.904
ATAF1 Arabidopsis lyrata scaffold_100066.1 I 0.874
BGIOSGA000374 Oryza indica BGIOSGA000374 I 0.894
BGIOSGA019897 Oryza indica BGIOSGA019897 I 0.890
BGIOSGA026695 Oryza indica BGIOSGA026695 I 0.909
BGIOSGA027623 Oryza indica BGIOSGA027623 I 0.876
BGIOSGA031230 Oryza indica BGIOSGA031230 I 0.922
BGIOSGA032231 Oryza indica BGIOSGA032231 N 0.909
Bo1g138800 Brassica oleracea Bo1g138800 I 0.902
Bo3g065200 Brassica oleracea Bo3g065200 I 0.871
Bo5g001100 Brassica oleracea Bo5g001100 I 0.880
Bo5g002810 Brassica oleracea Bo5g002810 I 0.892
Bo5g002850 Brassica oleracea Bo5g002850 I 0.894
Bo9g004070 Brassica oleracea Bo9g004070 I 0.885
Bo9g004110 Brassica oleracea Bo9g004110 I 0.873
Bostr.25375s0002 Boechera stricta Bostr.25375s0002 I 0.889
Bostr.3640s0064 Boechera stricta Bostr.3640s0064 I 0.902
Bostr.5325s0009 Boechera stricta Bostr.5325s0009 I 0.900
Bostr.5325s0019 Boechera stricta Bostr.5325s0019 I 0.880
Bostr.5325s0094 Boechera stricta Bostr.5325s0094 I 0.880
Bra027596 Brassica rapa Bra027596 I 0.874
Bra033239 Brassica rapa Bra033239 I 0.880
Bra034719 Brassica rapa Bra034719 I 0.879
Bra036328 Brassica rapa Bra036328 I 0.882
Bra039353 Brassica rapa Bra039353 I 0.902
BRADI2G03467 Brachypodium distachyon BRADI2G03467 I 0.915
BRADI2G57100 Brachypodium distachyon BRADI2G57100 I 0.898
BRADI4G37327 Brachypodium distachyon BRADI4G37327 I 0.922
Cagra.1968s0112 Capsella grandiflora Cagra.1968s0112 I 0.880
Cagra.5641s0055 Capsella grandiflora Cagra.5641s0055 I 0.901
Carubv10009451m.g Capsella rubella Carubv10009451m.g I 0.871
Carubv10009926m.g Capsella rubella Carubv10009926m.g I 0.880
Carubv10014270m.g Capsella rubella Carubv10014270m.g I 0.901
cassava28909.valid.m1 Manihot esculenta cassava28909.valid.m1 I 0.880
Ca_13571 Cicer arietinum Ca_13571 I 0.895
Ca_20988 Cicer arietinum Ca_20988 I 0.897
Cla011742 Citrullus lanatus Cla011742 I 0.895
Cla023594 Citrullus lanatus Cla023594 I 0.871
Eucgr.K02303 Eucalyptus grandis Eucgr.K02303 I 0.924
evm.TU.contig_29561 Carica papaya evm.TU.contig_29561 I 0.924
e_gw1.117.35.1 Physcomitrella patens e_gw1.117.35.1 I 0.884
e_gw1.140.53.1 Physcomitrella patens e_gw1.140.53.1 I 0.882
e_gw1.164.18.1 Physcomitrella patens e_gw1.164.18.1 I 0.890
e_gw1.164.26.1 Physcomitrella patens e_gw1.164.26.1 I 0.888
e_gw1.259.4.1 Physcomitrella patens e_gw1.259.4.1 I 0.881
e_gw1.5.134.1 Physcomitrella patens e_gw1.5.134.1 I 0.904
F775_00438 Aegilops tauschii F775_00438 N 0.940
F775_13961 Aegilops tauschii F775_13961 I 0.917
F775_20638 Aegilops tauschii F775_20638 I 0.900
F775_28813 Aegilops tauschii F775_28813 I 0.904
F775_30297 Aegilops tauschii F775_30297 I 0.871
fgenesh1_pg.scaffold_182000024 Physcomitrella patens fgenesh1_pg.scaffold_182000024 I 0.900
fgenesh2_kg.3__1353__AT3G12910.1 Arabidopsis lyrata fgenesh2_kg.3__1353__AT3G12910.1 I 0.902
GLYMA14G24220 Glycine max GLYMA14G24220 I 0.880
Gorai.005G088800 Gossypium raimondii Gorai.005G088800 I 0.904
Gorai.010G051900 Gossypium raimondii Gorai.010G051900 I 0.882
GRMZM2G014653 Zea mays GRMZM2G014653 I 0.894
GRMZM2G052239 Zea mays GRMZM2G052239 I 0.907
GRMZM2G079632 Zea mays GRMZM2G079632 I 0.904
GRMZM2G139700 Zea mays GRMZM2G139700 I 0.885
GRMZM2G162739 Zea mays GRMZM2G162739 I 0.904
GRMZM2G475014 Zea mays GRMZM2G475014 I 0.886
GSMUA_Achr10G08120_001 Musa acuminata GSMUA_Achr10G08120_001 I 0.877
GSMUA_Achr11G16860_001 Musa acuminata GSMUA_Achr11G16860_001 I 0.898
GSMUA_Achr4G02390_001 Musa acuminata GSMUA_Achr4G02390_001 I 0.885
GSMUA_Achr4G32010_001 Musa acuminata GSMUA_Achr4G32010_001 I 0.908
GSMUA_Achr6G18720_001 Musa acuminata GSMUA_Achr6G18720_001 I 0.888
GSMUA_Achr6G31580_001 Musa acuminata GSMUA_Achr6G31580_001 I 0.905
GSMUA_Achr7G21780_001 Musa acuminata GSMUA_Achr7G21780_001 I 0.896
GSMUA_Achr9G10040_001 Musa acuminata GSMUA_Achr9G10040_001 I 0.909
gw1.1.690.1 Physcomitrella patens gw1.1.690.1 I 0.914
gw1.6.394.1 Physcomitrella patens gw1.6.394.1 I 0.895
LPERR01G34090 Leersia perrieri LPERR01G34090 I 0.894
LPERR04G17350 Leersia perrieri LPERR04G17350 I 0.955
LPERR05G13490 Leersia perrieri LPERR05G13490 I 0.884
LPERR07G06440 Leersia perrieri LPERR07G06440 I 0.895
LPERR08G17020 Leersia perrieri LPERR08G17020 I 0.900
LPERR09G14720 Leersia perrieri LPERR09G14720 I 0.922
LPERR11G01300 Leersia perrieri LPERR11G01300 I 0.909
LPERR12G01440 Leersia perrieri LPERR12G01440 I 0.909
mgf013201m Mimulus guttatus mgf013201m I 0.897
MLOC_13932 Hordeum vulgare MLOC_13932 I 0.908
MLOC_37843 Hordeum vulgare MLOC_37843 I 0.925
MLOC_59162 Hordeum vulgare MLOC_59162 I 0.909
MLOC_65286 Hordeum vulgare MLOC_65286 I 0.908
MTR_1g008740 Medicago truncatula MTR_1g008740 I 0.883
MTR_2g068880 Medicago truncatula MTR_2g068880 I 0.907
MTR_2g068920 Medicago truncatula MTR_2g068920 I 0.900
MTR_8g023840 Medicago truncatula MTR_8g023840 I 0.907
NAC002 Arabidopsis thaliana AT1G01720 D 0.880
NAC026 Arabidopsis thaliana AT1G62700 I 0.895
NAC48 Oryza sativa OS01G0884300 D 0.894
OB01G48340 Oryza brachyantha OB01G48340 I 0.894
OB05G24820 Oryza brachyantha OB05G24820 I 0.891
OB09G25590 Oryza brachyantha OB09G25590 I 0.922
OBART01G39590 Oryza barthii OBART01G39590 I 0.894
OGLUM01G43820 Oryza glumaepatula OGLUM01G43820 I 0.894
OGLUM05G17980 Oryza glumaepatula OGLUM05G17980 I 0.890
OGLUM08G21360 Oryza glumaepatula OGLUM08G21360 I 0.910
OGLUM09G19480 Oryza glumaepatula OGLUM09G19480 I 0.922
OLONG_023103 Oryza longistaminata OLONG_023103 I 0.881
OMERI01G36460 Oryza meridionalis OMERI01G36460 I 0.894
OMERI04G25730 Oryza meridionalis OMERI04G25730 I 0.873
OMERI09G14170 Oryza meridionalis OMERI09G14170 I 0.922
ONIVA01G44460 Oryza nivara ONIVA01G44460 I 0.894
ONIVA05G14200 Oryza nivara ONIVA05G14200 I 0.930
ONIVA05G17670 Oryza nivara ONIVA05G17670 I 0.890
ONIVA08G03440 Oryza nivara ONIVA08G03440 I 0.876
ONIVA08G22710 Oryza nivara ONIVA08G22710 I 0.909
ONIVA09G20130 Oryza nivara ONIVA09G20130 I 0.922
OPUNC01G38300 Oryza punctata OPUNC01G38300 I 0.894
OPUNC04G19000 Oryza punctata OPUNC04G19000 N 0.950
OPUNC04G28220 Oryza punctata OPUNC04G28220 I 0.881
OPUNC08G18240 Oryza punctata OPUNC08G18240 I 0.908
OPUNC10G03390 Oryza punctata OPUNC10G03390 N 0.919
ORGLA01G0334900 Oryza glaberrima ORGLA01G0334900 I 0.894
ORGLA05G0146600 Oryza glaberrima ORGLA05G0146600 I 0.890
ORGLA08G0177600 Oryza glaberrima ORGLA08G0177600 I 0.910
ORGLA09G0151800 Oryza glaberrima ORGLA09G0151800 I 0.922
ORUFI01G42940 Oryza rufipogon ORUFI01G42940 I 0.894
ORUFI05G18190 Oryza rufipogon ORUFI05G18190 I 0.897
ORUFI08G03870 Oryza rufipogon ORUFI08G03870 I 0.876
ORUFI08G22550 Oryza rufipogon ORUFI08G22550 I 0.910
OS08G0157900 Oryza sativa OS08G0157900 I 0.876
OS08G0511200 Oryza sativa OS08G0511200 I 0.910
Pavir.Ba01386 Panicum virgatum Pavir.Ba01386 I 0.920
Pavir.Ba02036 Panicum virgatum Pavir.Ba02036 N 0.964
Pavir.Ba03301 Panicum virgatum Pavir.Ba03301 I 0.902
Pavir.Bb00806 Panicum virgatum Pavir.Bb00806 I 0.900
Pavir.Bb02323 Panicum virgatum Pavir.Bb02323 N 0.963
Pavir.Bb02626 Panicum virgatum Pavir.Bb02626 I 0.920
Pavir.Cb00167 Panicum virgatum Pavir.Cb00167 I 0.871
Pavir.Ea03621 Panicum virgatum Pavir.Ea03621 I 0.903
Pavir.Gb01092 Panicum virgatum Pavir.Gb01092 N 0.872
Pavir.Gb01143 Panicum virgatum Pavir.Gb01143 N 0.881
Pavir.Ia03443 Panicum virgatum Pavir.Ia03443 I 0.919
Pavir.Ib01528 Panicum virgatum Pavir.Ib01528 I 0.926
Pavir.J31204 Panicum virgatum Pavir.J31204 I 0.883
PGSC0003DMG400009920 Solanum tuberosum PGSC0003DMG400009920 I 0.872
PGSC0003DMG400039898 Solanum tuberosum PGSC0003DMG400039898 I 0.877
PK26157.1 Cannabis sativa PK26157.1 I 0.884
POPTR_0002s18320 Populus trichocarpa POPTR_0002s18320 I 0.874
POPTR_0003s14950 Populus trichocarpa POPTR_0003s14950 I 0.872
PRUPE_ppa017765mg Prunus persica PRUPE_ppa017765mg I 0.912
SapurV1A.0003s0330 Salix purpurea SapurV1A.0003s0330 I 0.872
SapurV1A.0059s0580 Salix purpurea SapurV1A.0059s0580 I 0.872
SapurV1A.0076s0070 Salix purpurea SapurV1A.0076s0070 I 0.873
SapurV1A.0093s0260 Salix purpurea SapurV1A.0093s0260 I 0.912
SapurV1A.0365s0200 Salix purpurea SapurV1A.0365s0200 I 0.884
SapurV1A.0740s0040 Salix purpurea SapurV1A.0740s0040 I 0.885
SapurV1A.3767s0010 Salix purpurea SapurV1A.3767s0010 I 0.885
Sb02g006680 Sorghum bicolor Sb02g006680 I 0.904
Sb02g032230 Sorghum bicolor Sb02g032230 I 0.920
Sb03g041920 Sorghum bicolor Sb03g041920 I 0.894
Sb06g024980 Sorghum bicolor Sb06g024980 N 0.912
Sb08g022560 Sorghum bicolor Sb08g022560 I 0.913
SELMODRAFT_69090 Selaginella moellendorffii SELMODRAFT_69090 I 0.876
SELMODRAFT_71305 Selaginella moellendorffii SELMODRAFT_71305 I 0.877
SELMODRAFT_71307 Selaginella moellendorffii SELMODRAFT_71307 I 0.895
SELMODRAFT_86855 Selaginella moellendorffii SELMODRAFT_86855 I 0.895
Si002413m.g Setaria italica Si002413m.g I 0.894
Si010053m.g Setaria italica Si010053m.g N 0.900
Si022714m.g Setaria italica Si022714m.g I 0.882
Si022723m.g Setaria italica Si022723m.g I 0.921
Si030752m.g Setaria italica Si030752m.g I 0.901
Si032702m.g Setaria italica Si032702m.g I 0.920
Si032881m.g Setaria italica Si032881m.g N 0.978
Si036303m.g Setaria italica Si036303m.g I 0.925
Solyc11g017470.1 Solanum lycopersicum Solyc11g017470.1 I 0.880
TCM_020121 Theobroma cacao TCM_020121 I 0.883
TCM_020127 Theobroma cacao TCM_020127 N 0.873
TCM_035160 Theobroma cacao TCM_035160 I 0.882
Thhalv10012158m.g Eutrema salsugineum Thhalv10012158m.g I 0.917
Thhalv10021225m.g Eutrema salsugineum Thhalv10021225m.g I 0.902
Thhalv10023502m.g Eutrema salsugineum Thhalv10023502m.g I 0.895
TRAES3BF002300010CFD_g Triticum aestivum TRAES3BF002300010CFD_g I 0.904
Traes_5BL_8BE382FE3 Triticum aestivum Traes_5BL_8BE382FE3 I 0.925
Traes_5DL_B69423A67 Triticum aestivum Traes_5DL_B69423A67 I 0.925
Traes_7AL_74CC91D39 Triticum aestivum Traes_7AL_74CC91D39 I 0.900
Traes_7DL_BDD45DB24 Triticum aestivum Traes_7DL_BDD45DB24 I 0.871
TRIUR3_13805 Triticum urartu TRIUR3_13805 I 0.925
TRIUR3_14109 Triticum urartu TRIUR3_14109 I 0.904
TRIUR3_29250 Triticum urartu TRIUR3_29250 I 0.871
VIT_06s0004g00020 Vitis vinifera VIT_06s0004g00020 I 0.903