CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb03g000330
(
Sorghum bicolor
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Sb03g000330
T295519_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC002
M00970_2.00
Arabidopsis thaliana
NBACGYAWMN
NKWTRCGTVN
PBM
Lindemose et al.(2014)
ATAF1
0.911
0.617
NAC002
M07159_2.00
Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND
HNRWDDNMDWDWNNNWYACGBM
Dap-seq
OMalley et al.(2016)
ATAF1_col_a
0.911
0.617
NAC002
M07160_2.00
Arabidopsis thaliana
YACGY
RCGTR
Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a
0.911
0.617
NAC48
M11084_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC6_01
0.898
0.609
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb03g000330.1
NAC/NAM
25
152
PPGFRFQPTDQEIIVCYLKKKIAGTATSVTSIIADVDIYKFDPWDLPDKAMFGEGEWFFFSPRDRKYPNGARPNRTAGSGYWKATGTDKPILAAGGAHCLGVKKALVFYQGRSPKGSKTEWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Sorghum bicolor
TFs
138 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TRAES3BF100600040CFD_g
Triticum aestivum
TRAES3BF100600040CFD_g
I
0.991
F775_23543
Aegilops tauschii
F775_23543
I
0.991
Si004195m.g
Setaria italica
Si004195m.g
I
0.991
Pavir.Ea00010
Panicum virgatum
Pavir.Ea00010
I
0.989
LPERR01G08530
Leersia perrieri
LPERR01G08530
N
0.980
POPTR_0004s04920
Populus trichocarpa
POPTR_0004s04920
I
0.977
Gorai.006G088400
Gossypium raimondii
Gorai.006G088400
I
0.968
TCM_029796
Theobroma cacao
TCM_029796
I
0.954
Si036303m.g
Setaria italica
Si036303m.g
I
0.945
Pavir.Ia03443
Panicum virgatum
Pavir.Ia03443
I
0.943
Pavir.Ib01528
Panicum virgatum
Pavir.Ib01528
I
0.943
e_gw1.259.4.1
Physcomitrella patens
e_gw1.259.4.1
I
0.939
mgf004020m
Mimulus guttatus
mgf004020m
I
0.938
e_gw1.117.35.1
Physcomitrella patens
e_gw1.117.35.1
I
0.936
Lus10015389.g
Linum usitatissimum
Lus10015389.g
I
0.935
GSMUA_Achr7G21780_001
Musa acuminata
GSMUA_Achr7G21780_001
I
0.934
OGLUM05G17550
Oryza glumaepatula
OGLUM05G17550
I
0.933
ORGLA05G0143100
Oryza glaberrima
ORGLA05G0143100
I
0.933
OBART05G16540
Oryza barthii
OBART05G16540
I
0.933
OS05G0415400
Oryza sativa
OS05G0415400
I
0.933
ONIVA05G17220
Oryza nivara
ONIVA05G17220
I
0.933
OPUNC05G14600
Oryza punctata
OPUNC05G14600
I
0.933
ORUFI05G17750
Oryza rufipogon
ORUFI05G17750
I
0.933
BGIOSGA018048
Oryza indica
BGIOSGA018048
I
0.933
e_gw1.5.134.1
Physcomitrella patens
e_gw1.5.134.1
I
0.933
e_gw1.164.26.1
Physcomitrella patens
e_gw1.164.26.1
I
0.932
e_gw1.140.53.1
Physcomitrella patens
e_gw1.140.53.1
I
0.923
Solyc04g009440.2
Solanum lycopersicum
Solyc04g009440.2
I
0.923
TCM_035160
Theobroma cacao
TCM_035160
I
0.922
Gorai.010G051900
Gossypium raimondii
Gorai.010G051900
I
0.922
OMERI05G14410
Oryza meridionalis
OMERI05G14410
I
0.920
LPERR05G13140
Leersia perrieri
LPERR05G13140
I
0.920
Aquca_014_00255
Aquilegia coerulea
Aquca_014_00255
I
0.920
e_gw1.164.18.1
Physcomitrella patens
e_gw1.164.18.1
I
0.919
Gorai.005G088800
Gossypium raimondii
Gorai.005G088800
I
0.919
cassava4505.m1
Manihot esculenta
cassava4505.m1
I
0.919
GSMUA_Achr4G02390_001
Musa acuminata
GSMUA_Achr4G02390_001
I
0.917
Solyc11g017470.1
Solanum lycopersicum
Solyc11g017470.1
I
0.917
anac032
Vitis vinifera
VIT_18s0001g02300
I
0.916
GRMZM2G162739
Zea mays
GRMZM2G162739
I
0.915
SapurV1A.3767s0010
Salix purpurea
SapurV1A.3767s0010
I
0.915
SapurV1A.0740s0040
Salix purpurea
SapurV1A.0740s0040
I
0.915
cassava28909.valid.m1
Manihot esculenta
cassava28909.valid.m1
I
0.914
VIT_06s0004g00020
Vitis vinifera
VIT_06s0004g00020
I
0.913
Sb02g006680
Sorghum bicolor
Sb02g006680
I
0.913
GRMZM2G079632
Zea mays
GRMZM2G079632
I
0.913
GLYMA14G24220
Glycine max
GLYMA14G24220
I
0.913
PK26157.1
Cannabis sativa
PK26157.1
I
0.912
SapurV1A.0365s0200
Salix purpurea
SapurV1A.0365s0200
I
0.912
Cagra.1968s0112
Capsella grandiflora
Cagra.1968s0112
I
0.911
Carubv10009926m.g
Capsella rubella
Carubv10009926m.g
I
0.911
Bostr.5325s0094
Boechera stricta
Bostr.5325s0094
I
0.911
Bo5g001100
Brassica oleracea
Bo5g001100
I
0.911
Bra033239
Brassica rapa
Bra033239
I
0.911
NAC002
Arabidopsis thaliana
AT1G01720
D
0.911
MLOC_59162
Hordeum vulgare
MLOC_59162
I
0.908
AMTR_s00017p00255350
Amborella trichopoda
AMTR_s00017p00255350
I
0.907
ATAF1
Arabidopsis lyrata
scaffold_100066.1
I
0.905
SapurV1A.2021s0010
Salix purpurea
SapurV1A.2021s0010
I
0.904
POPTR_0005s07060
Populus trichocarpa
POPTR_0005s07060
I
0.902
SapurV1A.0311s0230
Salix purpurea
SapurV1A.0311s0230
I
0.902
GLYMA05G32850
Glycine max
GLYMA05G32850
I
0.902
MTR_8g094580
Medicago truncatula
MTR_8g094580
I
0.901
BRADI2G03467
Brachypodium distachyon
BRADI2G03467
I
0.900
POPTR_0007s04780
Populus trichocarpa
POPTR_0007s04780
I
0.900
GSMUA_Achr6G18720_001
Musa acuminata
GSMUA_Achr6G18720_001
I
0.899
BRADI2G57100
Brachypodium distachyon
BRADI2G57100
I
0.899
NAC48
Oryza sativa
OS01G0884300
D
0.898
ONIVA01G44460
Oryza nivara
ONIVA01G44460
I
0.898
ORUFI01G42940
Oryza rufipogon
ORUFI01G42940
I
0.898
OBART01G39590
Oryza barthii
OBART01G39590
I
0.898
OGLUM01G43820
Oryza glumaepatula
OGLUM01G43820
I
0.898
OMERI01G36460
Oryza meridionalis
OMERI01G36460
I
0.898
OPUNC01G38300
Oryza punctata
OPUNC01G38300
I
0.898
ORGLA01G0334900
Oryza glaberrima
ORGLA01G0334900
I
0.898
Pavir.Ba03301
Panicum virgatum
Pavir.Ba03301
I
0.898
LPERR01G34090
Leersia perrieri
LPERR01G34090
I
0.898
LPERR05G13490
Leersia perrieri
LPERR05G13490
I
0.898
BGIOSGA000374
Oryza indica
BGIOSGA000374
I
0.898
OB01G48340
Oryza brachyantha
OB01G48340
I
0.898
OGLUM05G17980
Oryza glumaepatula
OGLUM05G17980
I
0.897
BGIOSGA019897
Oryza indica
BGIOSGA019897
I
0.897
ONIVA05G17670
Oryza nivara
ONIVA05G17670
I
0.897
Sb03g041920
Sorghum bicolor
Sb03g041920
I
0.897
ORGLA05G0146600
Oryza glaberrima
ORGLA05G0146600
I
0.897
Pavir.Bb00806
Panicum virgatum
Pavir.Bb00806
I
0.897
Si002413m.g
Setaria italica
Si002413m.g
I
0.896
GRMZM2G014653
Zea mays
GRMZM2G014653
I
0.896
Si030752m.g
Setaria italica
Si030752m.g
I
0.895
OB05G24820
Oryza brachyantha
OB05G24820
I
0.894
TRAES3BF002300010CFD_g
Triticum aestivum
TRAES3BF002300010CFD_g
I
0.894
TRIUR3_14109
Triticum urartu
TRIUR3_14109
I
0.894
F775_28813
Aegilops tauschii
F775_28813
I
0.894
Pavir.Cb00167
Panicum virgatum
Pavir.Cb00167
I
0.893
LPERR07G06440
Leersia perrieri
LPERR07G06440
I
0.891
SapurV1A.0039s0530
Salix purpurea
SapurV1A.0039s0530
I
0.890
mgf013201m
Mimulus guttatus
mgf013201m
I
0.890
GRMZM2G063522
Zea mays
GRMZM2G063522
I
0.889
Pavir.Ea03621
Panicum virgatum
Pavir.Ea03621
I
0.888
GSMUA_Achr9G10040_001
Musa acuminata
GSMUA_Achr9G10040_001
I
0.887
SapurV1A.0093s0260
Salix purpurea
SapurV1A.0093s0260
I
0.886
Cagra.0846s0004
Capsella grandiflora
Cagra.0846s0004
N
0.880
Bostr.26527s0049
Boechera stricta
Bostr.26527s0049
N
0.880
Carubv10001357m.g
Capsella rubella
Carubv10001357m.g
N
0.880
Pavir.J36955
Panicum virgatum
Pavir.J36955
I
0.880
anac089
Arabidopsis lyrata
scaffold_602275.1
N
0.880
OMERI01G15230
Oryza meridionalis
OMERI01G15230
I
0.880
Si022714m.g
Setaria italica
Si022714m.g
I
0.880
OMERI01G15210
Oryza meridionalis
OMERI01G15210
I
0.880
NAC089
Arabidopsis thaliana
AT5G22290
N
0.879
GRMZM2G083347
Zea mays
GRMZM2G083347
I
0.878
Pavir.Ga00022
Panicum virgatum
Pavir.Ga00022
I
0.877
OS01G0104500
Oryza sativa
OS01G0104500
I
0.877
OB01G10300
Oryza brachyantha
OB01G10300
I
0.877
Pavir.Ba02443
Panicum virgatum
Pavir.Ba02443
I
0.876
OGLUM01G00350
Oryza glumaepatula
OGLUM01G00350
I
0.875
OGLUM01G19440
Oryza glumaepatula
OGLUM01G19440
I
0.875
ONIVA01G00280
Oryza nivara
ONIVA01G00280
I
0.875
OBART01G00360
Oryza barthii
OBART01G00360
I
0.875
BGIOSGA001578
Oryza indica
BGIOSGA001578
I
0.875
BGIOSGA002597
Oryza indica
BGIOSGA002597
I
0.875
ONIVA01G18370
Oryza nivara
ONIVA01G18370
I
0.875
OBART01G16620
Oryza barthii
OBART01G16620
I
0.875
OLONG_022415
Oryza longistaminata
OLONG_022415
I
0.875
OS01G0393100
Oryza sativa
OS01G0393100
I
0.875
ORGLA12G0187900
Oryza glaberrima
ORGLA12G0187900
I
0.875
ORUFI01G00320
Oryza rufipogon
ORUFI01G00320
I
0.875
ORUFI01G18470
Oryza rufipogon
ORUFI01G18470
I
0.875
Solyc08g074300.2
Solanum lycopersicum
Solyc08g074300.2
I
0.875
BRADI1G32660
Brachypodium distachyon
BRADI1G32660
I
0.874
LPERR12G01440
Leersia perrieri
LPERR12G01440
I
0.873
GSMUA_Achr10G08120_001
Musa acuminata
GSMUA_Achr10G08120_001
I
0.873
Sb08g022560
Sorghum bicolor
Sb08g022560
I
0.873
Sb08g014060
Sorghum bicolor
Sb08g014060
I
0.872
LPERR09G11150
Leersia perrieri
LPERR09G11150
N
0.872
cassava39074.m1
Manihot esculenta
cassava39074.m1
I
0.871
Pavir.Gb00488
Panicum virgatum
Pavir.Gb00488
N
0.871
mgf002183m
Mimulus guttatus
mgf002183m
I
0.871