Sb08g001940 (Sorghum bicolor)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Sb08g001940 T295581_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Traes_5BL_CC18CAD72
M11085_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$NAC691_01 		0.944 0.839
NAC029
M00973_2.00 		Arabidopsis thaliana
NBACGBMWNN
NNWKVCGTVN		 PBM
Lindemose et al.(2014)
NAP 		0.880 0.795
NAC029
M02369_2.00 		Arabidopsis thaliana
NRGTCAWNN
NNWTGACYN		 PBM
Weirauch et al.(2014)
pTH8397 		0.880 0.795
NAC029
M07180_2.00 		Arabidopsis thaliana
NCGTVHNNNWYACGBMA
TKVCGTRWNNNDBACGN		 Dap-seq
OMalley et al.(2016)
NAP_colamp_a 		0.880 0.795
NAC029
M07181_2.00 		Arabidopsis thaliana
WYACGBMAYYD
HRRTKVCGTRW		 Dap-seq
OMalley et al.(2016)
NAP_col_v3a 		0.880 0.795
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb08g001940.1 NAC/NAM 21 147

Links

Other NAC/NAM family TFs
Other Sorghum bicolor TFs

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si010410m.g Setaria italica Si010410m.g I 0.963
Si026530m.g Setaria italica Si026530m.g I 0.962
OPUNC11G01330 Oryza punctata OPUNC11G01330 I 0.958
OPUNC12G01370 Oryza punctata OPUNC12G01370 I 0.958
Sb05g001580 Sorghum bicolor Sb05g001580 I 0.956
OB12G11500 Oryza brachyantha OB12G11500 I 0.955
OB11G11210 Oryza brachyantha OB11G11210 I 0.955
OLONG_026749 Oryza longistaminata OLONG_026749 I 0.954
BGIOSGA036920 Oryza indica BGIOSGA036920 I 0.954
Pavir.J23516 Panicum virgatum Pavir.J23516 I 0.954
OS12G0123700 Oryza sativa OS12G0123700 I 0.954
OBART11G01590 Oryza barthii OBART11G01590 I 0.953
OBART12G01290 Oryza barthii OBART12G01290 I 0.953
ONIVA11G01630 Oryza nivara ONIVA11G01630 I 0.953
ORGLA12G0011400 Oryza glaberrima ORGLA12G0011400 I 0.953
OGLUM12G01870 Oryza glumaepatula OGLUM12G01870 I 0.953
OGLUM11G01310 Oryza glumaepatula OGLUM11G01310 I 0.953
OS11G0126900 Oryza sativa OS11G0126900 I 0.953
BGIOSGA036918 Oryza indica BGIOSGA036918 I 0.953
BGIOSGA034713 Oryza indica BGIOSGA034713 I 0.953
OLONG_020632 Oryza longistaminata OLONG_020632 I 0.952
OMERI12G00480 Oryza meridionalis OMERI12G00480 I 0.946
Traes_5BL_CC18CAD72 Triticum aestivum Traes_5BL_CC18CAD72 D 0.944
F775_26965 Aegilops tauschii F775_26965 I 0.944
MLOC_4747 Hordeum vulgare MLOC_4747 I 0.944
ORUFI12G01570 Oryza rufipogon ORUFI12G01570 I 0.933
GRMZM2G127379 Zea mays GRMZM2G127379 I 0.927
GSMUA_Achr6G32320_001 Musa acuminata GSMUA_Achr6G32320_001 I 0.909
LPERR12G01440 Leersia perrieri LPERR12G01440 I 0.906
Pavir.Ea00837 Panicum virgatum Pavir.Ea00837 I 0.899
GRMZM2G109627 Zea mays GRMZM2G109627 I 0.892
LPERR11G01300 Leersia perrieri LPERR11G01300 I 0.891
GSMUA_AchrUn_randomG17360_001 Musa acuminata GSMUA_AchrUn_randomG17360_001 I 0.889
NAP Vitis vinifera VIT_01s0026g02710 I 0.887
MDP0000481448 Malus domestica MDP0000481448 I 0.885
mgf022118m Mimulus guttatus mgf022118m I 0.885
PRUPE_ppa009530mg Prunus persica PRUPE_ppa009530mg I 0.884
29813.m001519 Ricinus communis 29813.m001519 I 0.884
Pm006470 Prunus mume Pm006470 I 0.884
Ciclev10032304m.g Citrus clementina Ciclev10032304m.g I 0.883
cassava1317.valid.m1 Manihot esculenta cassava1317.valid.m1 I 0.883
Eucgr.G02486 Eucalyptus grandis Eucgr.G02486 I 0.883
orange1.1g023197m.g Citrus sinensis orange1.1g023197m.g I 0.883
chr1.CM0104.240.nc Lotus japonicus chr1.CM0104.240.nc I 0.882
Cla010367 Citrullus lanatus Cla010367 I 0.882
PK25119.1 Cannabis sativa PK25119.1 I 0.882
Cucsa.284890 Cucumis sativus Cucsa.284890 I 0.882
Lus10037156.g Linum usitatissimum Lus10037156.g I 0.882
Gorai.008G179900 Gossypium raimondii Gorai.008G179900 I 0.882
GSMUA_Achr7G21770_001 Musa acuminata GSMUA_Achr7G21770_001 I 0.881
Lus10036773.g Linum usitatissimum Lus10036773.g I 0.881
Pavir.J23256 Panicum virgatum Pavir.J23256 I 0.881
Carubv10020776m.g Capsella rubella Carubv10020776m.g I 0.880
Bostr.10273s0418 Boechera stricta Bostr.10273s0418 I 0.880
Cagra.0887s0008 Capsella grandiflora Cagra.0887s0008 I 0.880
Bo6g108930 Brassica oleracea Bo6g108930 I 0.880
NAC029 Arabidopsis thaliana AT1G69490 D 0.880
GSMUA_Achr3G18010_001 Musa acuminata GSMUA_Achr3G18010_001 I 0.880
Bra004385 Brassica rapa Bra004385 I 0.880
Thhalv10018997m.g Eutrema salsugineum Thhalv10018997m.g I 0.880
GRMZM2G430849 Zea mays GRMZM2G430849 I 0.880
NAP Arabidopsis lyrata fgenesh2_kg.2__1206__AT1G69490.1 I 0.880
e_gw1.15.275.1 Physcomitrella patens e_gw1.15.275.1 I 0.880
Gorai.005G142300 Gossypium raimondii Gorai.005G142300 I 0.879
TCM_011671 Theobroma cacao TCM_011671 I 0.879
GSMUA_Achr10G12860_001 Musa acuminata GSMUA_Achr10G12860_001 I 0.878
Si030267m.g Setaria italica Si030267m.g I 0.877
SapurV1A.0801s0090 Salix purpurea SapurV1A.0801s0090 I 0.877
MTR_4g081870 Medicago truncatula MTR_4g081870 I 0.875
POPTR_0008s08850 Populus trichocarpa POPTR_0008s08850 I 0.875
PGSC0003DMG400018435 Solanum tuberosum PGSC0003DMG400018435 I 0.874
MDP0000262990 Malus domestica MDP0000262990 I 0.874
PGSC0003DMG400002824 Solanum tuberosum PGSC0003DMG400002824 I 0.871
GLYMA07G35630 Glycine max GLYMA07G35630 I 0.871
SELMODRAFT_133982 Selaginella moellendorffii SELMODRAFT_133982 I 0.871
SELMODRAFT_47266 Selaginella moellendorffii SELMODRAFT_47266 I 0.871