CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SELMODRAFT_100973
(
Selaginella moellendorffii
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
SELMODRAFT_100973
T295633_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC037
M07187_2.00
Arabidopsis thaliana
CKTVNDNHNYAMG
CKTRNDNHNBAMG
Dap-seq
OMalley et al.(2016)
VND1_col_a
0.938
0.833
ANAC076
M07224_2.00
Arabidopsis thaliana
TRCKTVHNNHNYAMG
CKTRNDNNDBAMGYA
Dap-seq
OMalley et al.(2016)
VND2_col_a
0.934
0.851
ANAC076
M07225_2.00
Arabidopsis thaliana
TTGCKTVHNNHNYAMGYHAHNNN
NNNDTDRCKTRNDNNDBAMGCAA
Dap-seq
OMalley et al.(2016)
VND2_colamp_a
0.934
0.851
NAC007
M07164_2.00
Arabidopsis thaliana
TTRCKTVHDNNNYAMG
CKTRNNNHDBAMGYAA
Dap-seq
OMalley et al.(2016)
VND4_colamp_a
0.913
0.807
NAC007
M07165_2.00
Arabidopsis thaliana
TGCKTVHDNHDYAMG
CKTRHDNHDBAMGCA
Dap-seq
OMalley et al.(2016)
VND4_col
0.913
0.807
OS06G0131700
M02378_2.00
Oryza sativa
NNNNHMDNND
HNNHKDNNNN
PBM
Weirauch et al.(2014)
pTH8356
0.890
0.781
NAC105
M00980_2.00
Arabidopsis thaliana
NYWHKNHWNN
NNWDNMDWRN
PBM
Lindemose et al.(2014)
VND3
0.878
0.789
NAC105
M07245_2.00
Arabidopsis thaliana
NTTGCTTVNNNHNYAMG
CKTRNDNNNBAAGCAAN
Dap-seq
OMalley et al.(2016)
VND3_colamp_a
0.878
0.789
NAC105
M07246_2.00
Arabidopsis thaliana
TTGCTTVHNNHNYAMG
CKTRNDNNDBAAGCAA
Dap-seq
OMalley et al.(2016)
VND3_col
0.878
0.789
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFJ24736
NAC/NAM
8
134
PPGFRFHPTDEELVGYYLYKKVSSEAIDLDIIRDIDLYKMEPWDLQEDCASSADQSEWYFFSHKDKKYPTGSRTNRATTAGFWKATGRDKAIHTKFKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Selaginella moellendorffii
TFs
360 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy