CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SELMODRAFT_71305
(
Selaginella moellendorffii
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
SELMODRAFT_71305
T295662_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC002
M00970_2.00
Arabidopsis thaliana
NBACGYAWMN
NKWTRCGTVN
PBM
Lindemose et al.(2014)
ATAF1
0.911
0.571
NAC002
M07159_2.00
Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND
HNRWDDNMDWDWNNNWYACGBM
Dap-seq
OMalley et al.(2016)
ATAF1_col_a
0.911
0.571
NAC002
M07160_2.00
Arabidopsis thaliana
YACGY
RCGTR
Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a
0.911
0.571
NAC101
M07241_2.00
Arabidopsis thaliana
TGCKTVNDNHNYAMG
CKTRNDNHNBAMGCA
Dap-seq
OMalley et al.(2016)
VND6_colamp_a
0.881
0.482
NAC101
M07242_2.00
Arabidopsis thaliana
TTGCKTVHDNNNYAMGYHWHN
NDWDRCKTRNNNHDBAMGCAA
Dap-seq
OMalley et al.(2016)
VND6_col_v31
0.881
0.482
NAC48
M11084_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC6_01
0.877
0.545
NAC69
M07216_2.00
Arabidopsis thaliana
WMCTTVTNNNNYAAG
CTTRNNNNABAAGKW
Dap-seq
OMalley et al.(2016)
NTM2_col_b
0.874
0.482
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFJ37025
NAC/NAM
1
124
PGFRFNPTEEELVSFYLECKVRGKLNLPPGVILDVDFYHHDPWELSGISNTKVFYFFVPRDRKYPDGSRPRRVARSGYWKATGTDHKVSDFRGKCIGKKKTLVFYQGRAPKGNKTNWVMNEFRL
Links
Other
NAC/NAM
family TFs
Other
Selaginella moellendorffii
TFs
177 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SELMODRAFT_69090
Selaginella moellendorffii
SELMODRAFT_69090
I
0.992
mgf004020m
Mimulus guttatus
mgf004020m
I
0.921
Gorai.006G088400
Gossypium raimondii
Gorai.006G088400
I
0.919
Si036303m.g
Setaria italica
Si036303m.g
I
0.918
GSMUA_Achr11G16860_001
Musa acuminata
GSMUA_Achr11G16860_001
I
0.918
GSMUA_Achr6G31580_001
Musa acuminata
GSMUA_Achr6G31580_001
I
0.916
Pavir.Ib01528
Panicum virgatum
Pavir.Ib01528
I
0.915
Aquca_014_00255
Aquilegia coerulea
Aquca_014_00255
I
0.915
Pavir.Ia03443
Panicum virgatum
Pavir.Ia03443
I
0.914
Cla011742
Citrullus lanatus
Cla011742
I
0.914
GSMUA_Achr4G32010_001
Musa acuminata
GSMUA_Achr4G32010_001
I
0.914
Cagra.1968s0112
Capsella grandiflora
Cagra.1968s0112
I
0.911
Bra033239
Brassica rapa
Bra033239
I
0.911
Carubv10009926m.g
Capsella rubella
Carubv10009926m.g
I
0.911
ATAF1
Arabidopsis lyrata
scaffold_100066.1
I
0.911
NAC002
Arabidopsis thaliana
AT1G01720
D
0.911
Bostr.5325s0094
Boechera stricta
Bostr.5325s0094
I
0.911
Bo5g001100
Brassica oleracea
Bo5g001100
I
0.911
Thhalv10023502m.g
Eutrema salsugineum
Thhalv10023502m.g
I
0.910
mgf002365m
Mimulus guttatus
mgf002365m
I
0.910
NAC026
Arabidopsis thaliana
AT1G62700
I
0.910
LPERR07G06440
Leersia perrieri
LPERR07G06440
I
0.909
POPTR_0004s04920
Populus trichocarpa
POPTR_0004s04920
I
0.909
GLYMA14G24220
Glycine max
GLYMA14G24220
I
0.908
cassava28909.valid.m1
Manihot esculenta
cassava28909.valid.m1
I
0.908
MTR_1g008740
Medicago truncatula
MTR_1g008740
I
0.907
SapurV1A.0365s0200
Salix purpurea
SapurV1A.0365s0200
I
0.906
SapurV1A.0740s0040
Salix purpurea
SapurV1A.0740s0040
I
0.905
SapurV1A.3767s0010
Salix purpurea
SapurV1A.3767s0010
I
0.905
Solyc08g074300.2
Solanum lycopersicum
Solyc08g074300.2
I
0.905
SapurV1A.0344s0360
Salix purpurea
SapurV1A.0344s0360
I
0.904
OMERI04G25730
Oryza meridionalis
OMERI04G25730
I
0.903
OMERI09G14170
Oryza meridionalis
OMERI09G14170
I
0.902
ONIVA09G20130
Oryza nivara
ONIVA09G20130
I
0.902
LPERR09G14720
Leersia perrieri
LPERR09G14720
I
0.902
OGLUM09G19480
Oryza glumaepatula
OGLUM09G19480
I
0.902
OB09G25590
Oryza brachyantha
OB09G25590
I
0.902
ORGLA09G0151800
Oryza glaberrima
ORGLA09G0151800
I
0.902
BGIOSGA031230
Oryza indica
BGIOSGA031230
I
0.902
GSMUA_Achr10G08120_001
Musa acuminata
GSMUA_Achr10G08120_001
I
0.902
F775_30297
Aegilops tauschii
F775_30297
I
0.901
TCM_035160
Theobroma cacao
TCM_035160
I
0.901
Traes_7DL_BDD45DB24
Triticum aestivum
Traes_7DL_BDD45DB24
I
0.901
Gorai.010G051900
Gossypium raimondii
Gorai.010G051900
I
0.901
TRIUR3_29250
Triticum urartu
TRIUR3_29250
I
0.901
Sb02g032230
Sorghum bicolor
Sb02g032230
I
0.900
TCM_029796
Theobroma cacao
TCM_029796
I
0.900
Si022714m.g
Setaria italica
Si022714m.g
I
0.899
PGSC0003DMG400029593
Solanum tuberosum
PGSC0003DMG400029593
I
0.899
GSMUA_Achr9G10040_001
Musa acuminata
GSMUA_Achr9G10040_001
I
0.899
evm.TU.contig_29561
Carica papaya
evm.TU.contig_29561
I
0.898
Sb08g022560
Sorghum bicolor
Sb08g022560
I
0.898
BRADI4G37327
Brachypodium distachyon
BRADI4G37327
I
0.898
Gorai.005G088800
Gossypium raimondii
Gorai.005G088800
I
0.898
Eucgr.K02303
Eucalyptus grandis
Eucgr.K02303
I
0.898
Si032702m.g
Setaria italica
Si032702m.g
I
0.897
ONIVA05G17220
Oryza nivara
ONIVA05G17220
I
0.897
OPUNC05G14600
Oryza punctata
OPUNC05G14600
I
0.897
ORUFI05G17750
Oryza rufipogon
ORUFI05G17750
I
0.897
OS05G0415400
Oryza sativa
OS05G0415400
I
0.897
BGIOSGA018048
Oryza indica
BGIOSGA018048
I
0.897
ORGLA05G0143100
Oryza glaberrima
ORGLA05G0143100
I
0.897
Eucgr.F01463
Eucalyptus grandis
Eucgr.F01463
I
0.897
Pavir.Ba01386
Panicum virgatum
Pavir.Ba01386
I
0.897
Pavir.Bb02626
Panicum virgatum
Pavir.Bb02626
I
0.897
OBART05G16540
Oryza barthii
OBART05G16540
I
0.897
OGLUM05G17550
Oryza glumaepatula
OGLUM05G17550
I
0.897
Cla023594
Citrullus lanatus
Cla023594
I
0.896
GSMUA_Achr4G02390_001
Musa acuminata
GSMUA_Achr4G02390_001
I
0.895
Solyc11g017470.1
Solanum lycopersicum
Solyc11g017470.1
I
0.895
OPUNC04G28220
Oryza punctata
OPUNC04G28220
I
0.894
GSMUA_Achr7G21780_001
Musa acuminata
GSMUA_Achr7G21780_001
I
0.894
Bra036328
Brassica rapa
Bra036328
I
0.893
BRADI2G03467
Brachypodium distachyon
BRADI2G03467
I
0.893
cassava39074.m1
Manihot esculenta
cassava39074.m1
I
0.893
e_gw1.164.18.1
Physcomitrella patens
e_gw1.164.18.1
I
0.892
MLOC_37843
Hordeum vulgare
MLOC_37843
I
0.892
e_gw1.140.53.1
Physcomitrella patens
e_gw1.140.53.1
I
0.892
Traes_5DL_B69423A67
Triticum aestivum
Traes_5DL_B69423A67
I
0.892
TRIUR3_13805
Triticum urartu
TRIUR3_13805
I
0.892
Traes_5BL_8BE382FE3
Triticum aestivum
Traes_5BL_8BE382FE3
I
0.892
Si010680m.g
Setaria italica
Si010680m.g
I
0.891
PK26157.1
Cannabis sativa
PK26157.1
I
0.891
anac032
Vitis vinifera
VIT_18s0001g02300
I
0.891
LPERR04G17350
Leersia perrieri
LPERR04G17350
I
0.890
GRMZM2G162739
Zea mays
GRMZM2G162739
I
0.890
VIT_06s0004g00020
Vitis vinifera
VIT_06s0004g00020
I
0.890
Sb02g006680
Sorghum bicolor
Sb02g006680
I
0.889
GRMZM2G079632
Zea mays
GRMZM2G079632
I
0.889
mgf013201m
Mimulus guttatus
mgf013201m
I
0.889
GSMUA_Achr6G18720_001
Musa acuminata
GSMUA_Achr6G18720_001
I
0.888
Si022723m.g
Setaria italica
Si022723m.g
I
0.887
AMTR_s00017p00255350
Amborella trichopoda
AMTR_s00017p00255350
I
0.887
PRUPE_ppa017765mg
Prunus persica
PRUPE_ppa017765mg
I
0.885
Thhalv10011123m.g
Eutrema salsugineum
Thhalv10011123m.g
N
0.885
e_gw1.5.134.1
Physcomitrella patens
e_gw1.5.134.1
I
0.884
TRIUR3_18561
Triticum urartu
TRIUR3_18561
I
0.884
Pavir.Ba03301
Panicum virgatum
Pavir.Ba03301
I
0.884
Cagra.4003s0027
Capsella grandiflora
Cagra.4003s0027
I
0.883
Carubv10026697m.g
Capsella rubella
Carubv10026697m.g
I
0.883
Bra029266
Brassica rapa
Bra029266
I
0.881
Bo3g107700
Brassica oleracea
Bo3g107700
I
0.881
VND6
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_8001814
I
0.881
NAC101
Arabidopsis thaliana
AT5G62380
D
0.881
Si030752m.g
Setaria italica
Si030752m.g
I
0.881
Aquca_009_00966
Aquilegia coerulea
Aquca_009_00966
I
0.881
Thhalv10004488m.g
Eutrema salsugineum
Thhalv10004488m.g
I
0.881
Bostr.0568s0569
Boechera stricta
Bostr.0568s0569
I
0.881
Bostr.4825s0023
Boechera stricta
Bostr.4825s0023
I
0.881
Bo2g164090
Brassica oleracea
Bo2g164090
I
0.881
Bo9g014940
Brassica oleracea
Bo9g014940
I
0.880
VIT_19s0027g00840
Vitis vinifera
VIT_19s0027g00840
I
0.880
Bo9g004070
Brassica oleracea
Bo9g004070
I
0.880
AMTR_s00022p00160350
Amborella trichopoda
AMTR_s00022p00160350
I
0.880
Bra010077
Brassica rapa
Bra010077
I
0.880
SapurV1A.0869s0210
Salix purpurea
SapurV1A.0869s0210
I
0.880
Sb07g005610
Sorghum bicolor
Sb07g005610
I
0.880
SapurV1A.0059s0580
Salix purpurea
SapurV1A.0059s0580
I
0.880
Pavir.Bb00806
Panicum virgatum
Pavir.Bb00806
I
0.880
mgf019285m
Mimulus guttatus
mgf019285m
I
0.879
ORGLA04G0270600
Oryza glaberrima
ORGLA04G0270600
I
0.878
OS04G0691300
Oryza sativa
OS04G0691300
I
0.878
LPERR12G01440
Leersia perrieri
LPERR12G01440
I
0.878
OGLUM04G30580
Oryza glumaepatula
OGLUM04G30580
I
0.878
ORUFI04G32410
Oryza rufipogon
ORUFI04G32410
I
0.878
ONIVA04G29890
Oryza nivara
ONIVA04G29890
I
0.878
BGIOSGA014034
Oryza indica
BGIOSGA014034
I
0.878
LPERR05G13490
Leersia perrieri
LPERR05G13490
I
0.878
BGIOSGA000374
Oryza indica
BGIOSGA000374
I
0.877
Pavir.Ea03621
Panicum virgatum
Pavir.Ea03621
I
0.877
e_gw1.164.26.1
Physcomitrella patens
e_gw1.164.26.1
I
0.877
BRADI1G32660
Brachypodium distachyon
BRADI1G32660
I
0.877
OMERI01G36460
Oryza meridionalis
OMERI01G36460
I
0.877
F775_28813
Aegilops tauschii
F775_28813
I
0.877
ONIVA01G44460
Oryza nivara
ONIVA01G44460
I
0.877
BRADI2G57100
Brachypodium distachyon
BRADI2G57100
I
0.877
OGLUM01G43820
Oryza glumaepatula
OGLUM01G43820
I
0.877
OBART01G39590
Oryza barthii
OBART01G39590
I
0.877
LPERR01G34090
Leersia perrieri
LPERR01G34090
I
0.877
GRMZM2G167018
Zea mays
GRMZM2G167018
I
0.877
MLOC_59162
Hordeum vulgare
MLOC_59162
I
0.877
OB01G48340
Oryza brachyantha
OB01G48340
I
0.877
OPUNC01G38300
Oryza punctata
OPUNC01G38300
I
0.877
ORGLA01G0334900
Oryza glaberrima
ORGLA01G0334900
I
0.877
Sb02g026510
Sorghum bicolor
Sb02g026510
I
0.877
Sb03g041920
Sorghum bicolor
Sb03g041920
I
0.877
SapurV1A.0076s0070
Salix purpurea
SapurV1A.0076s0070
I
0.877
TRAES3BF002300010CFD_g
Triticum aestivum
TRAES3BF002300010CFD_g
I
0.877
POPTR_0003s14950
Populus trichocarpa
POPTR_0003s14950
I
0.877
ORUFI01G42940
Oryza rufipogon
ORUFI01G42940
I
0.877
NAC48
Oryza sativa
OS01G0884300
D
0.877
TRIUR3_14109
Triticum urartu
TRIUR3_14109
I
0.877
Si004195m.g
Setaria italica
Si004195m.g
I
0.877
SapurV1A.0093s0260
Salix purpurea
SapurV1A.0093s0260
I
0.876
Pavir.Ga00022
Panicum virgatum
Pavir.Ga00022
I
0.876
SapurV1A.0311s0230
Salix purpurea
SapurV1A.0311s0230
I
0.875
POPTR_0007s04780
Populus trichocarpa
POPTR_0007s04780
I
0.875
Si002413m.g
Setaria italica
Si002413m.g
I
0.875
GRMZM2G014653
Zea mays
GRMZM2G014653
I
0.875
GLYMA05G32850
Glycine max
GLYMA05G32850
I
0.875
VIT_18s0041g00700
Vitis vinifera
VIT_18s0041g00700
N
0.875
POPTR_0005s07060
Populus trichocarpa
POPTR_0005s07060
I
0.875
e_gw1.117.35.1
Physcomitrella patens
e_gw1.117.35.1
I
0.875
MTR_8g094580
Medicago truncatula
MTR_8g094580
I
0.874
LPERR11G01300
Leersia perrieri
LPERR11G01300
I
0.874
anac069
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_6002854
I
0.874
Pavir.Ba02443
Panicum virgatum
Pavir.Ba02443
I
0.874
Carubv10003260m.g
Capsella rubella
Carubv10003260m.g
I
0.874
NAC69
Arabidopsis thaliana
AT4G01550
D
0.874
Bra035896
Brassica rapa
Bra035896
I
0.873
Gorai.010G171100
Gossypium raimondii
Gorai.010G171100
I
0.873
MLOC_25708
Hordeum vulgare
MLOC_25708
N
0.873
GRMZM2G063522
Zea mays
GRMZM2G063522
I
0.873
OMERI05G14410
Oryza meridionalis
OMERI05G14410
I
0.873
Pavir.J36955
Panicum virgatum
Pavir.J36955
I
0.872
Cucsa.119310
Cucumis sativus
Cucsa.119310
N
0.872
Cla007018
Citrullus lanatus
Cla007018
N
0.871