CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SELMODRAFT_95019
(
Selaginella moellendorffii
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
SELMODRAFT_95019
T295672_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
e_gw1.288.15.1
M02381_2.00
Physcomitrella patens
NNNBAMKNHW
WDNMKTVNNN
PBM
Weirauch et al.(2014)
pTH8467
0.902
0.814
e_gw1.159.34.1
M02379_2.00
Physcomitrella patens
DYACGNHANN
NNTDNCGTRH
PBM
Weirauch et al.(2014)
pTH8477
0.888
0.752
e_gw1.327.11.1
M02382_2.00
Physcomitrella patens
NTTDYRTWWN
NWWAYRHAAN
PBM
Weirauch et al.(2014)
pTH8478
0.881
0.761
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFJ27643
NAC/NAM
11
136
PPGFRFHPTDEELVYYLTRKVLFSSFRISAIAEVDLNKCEPWDLPSKASMGEKEWYFYTLRDRKYPTGMRTNRATEAGYWKATGKDRNINSSRTSCLVGMKKTLVFYRGRAPKGLKSNWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Selaginella moellendorffii
TFs
58 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SELMODRAFT_77371
Selaginella moellendorffii
SELMODRAFT_77371
I
0.967
estExt_gwp_gw1.C_460173
Physcomitrella patens
estExt_gwp_gw1.C_460173
I
0.918
e_gw1.227.43.1
Physcomitrella patens
e_gw1.227.43.1
I
0.911
gene00971-v1.0-hybrid
Fragaria vesca
gene00971-v1.0-hybrid
I
0.909
Aquca_033_00035
Aquilegia coerulea
Aquca_033_00035
I
0.909
e_gw1.288.15.1
Physcomitrella patens
e_gw1.288.15.1
D
0.902
VIT_19s0014g02200
Vitis vinifera
VIT_19s0014g02200
I
0.896
MTR_2g078700
Medicago truncatula
MTR_2g078700
I
0.895
Ca_22532
Cicer arietinum
Ca_22532
I
0.895
LjSGA_071377.1
Lotus japonicus
LjSGA_071377.1
I
0.893
chr3.CM0282.730.nc
Lotus japonicus
chr3.CM0282.730.nc
I
0.892
GLYMA12G26190
Glycine max
GLYMA12G26190
I
0.891
GLYMA06G35660
Glycine max
GLYMA06G35660
I
0.891
Cucsa.122890
Cucumis sativus
Cucsa.122890
I
0.889
Cla023717
Citrullus lanatus
Cla023717
I
0.889
e_gw1.159.34.1
Physcomitrella patens
e_gw1.159.34.1
D
0.888
mgf003818m
Mimulus guttatus
mgf003818m
I
0.888
TCM_018621
Theobroma cacao
TCM_018621
I
0.885
GLYMA12G35530
Glycine max
GLYMA12G35530
I
0.884
GLYMA13G34950
Glycine max
GLYMA13G34950
I
0.884
POPTR_0001s40680
Populus trichocarpa
POPTR_0001s40680
I
0.883
SapurV1A.0207s0120
Salix purpurea
SapurV1A.0207s0120
I
0.883
SapurV1A.0308s0280
Salix purpurea
SapurV1A.0308s0280
I
0.881
e_gw1.327.11.1
Physcomitrella patens
e_gw1.327.11.1
D
0.881
SapurV1A.2283s0010
Salix purpurea
SapurV1A.2283s0010
I
0.881
VIT_14s0108g01070
Vitis vinifera
VIT_14s0108g01070
I
0.879
PRUPE_ppa026810mg
Prunus persica
PRUPE_ppa026810mg
I
0.878
evm.TU.supercontig_131.88
Carica papaya
evm.TU.supercontig_131.88
I
0.878
MDP0000310981
Malus domestica
MDP0000310981
I
0.878
SapurV1A.2059s0010
Salix purpurea
SapurV1A.2059s0010
I
0.878
Gorai.002G067300
Gossypium raimondii
Gorai.002G067300
I
0.878
SapurV1A.1325s0010
Salix purpurea
SapurV1A.1325s0010
I
0.878
cassava44869.m1
Manihot esculenta
cassava44869.m1
I
0.878
POPTR_0011s11600
Populus trichocarpa
POPTR_0011s11600
I
0.878
TCM_031619
Theobroma cacao
TCM_031619
I
0.878
Pm011397
Prunus mume
Pm011397
I
0.878
27950.m000105
Ricinus communis
27950.m000105
I
0.878
Lus10005537.g
Linum usitatissimum
Lus10005537.g
I
0.877
Lus10041924.g
Linum usitatissimum
Lus10041924.g
I
0.877
PRUPE_ppa007883mg
Prunus persica
PRUPE_ppa007883mg
I
0.877
Eucgr.I01958
Eucalyptus grandis
Eucgr.I01958
I
0.875
AMTR_s00010p00266320
Amborella trichopoda
AMTR_s00010p00266320
I
0.875
GLYMA19G02850
Glycine max
GLYMA19G02850
I
0.875
SELMODRAFT_67245
Selaginella moellendorffii
SELMODRAFT_67245
I
0.874
Pm015914
Prunus mume
Pm015914
I
0.874
SELMODRAFT_71303
Selaginella moellendorffii
SELMODRAFT_71303
I
0.874
Solyc07g062840.2
Solanum lycopersicum
Solyc07g062840.2
I
0.872
Bo9g113820
Brassica oleracea
Bo9g113820
I
0.871
Thhalv10013863m.g
Eutrema salsugineum
Thhalv10013863m.g
I
0.871
F775_05949
Aegilops tauschii
F775_05949
I
0.871
PDK_20s1323531g003
Phoenix dactylifera
PDK_20s1323531g003
I
0.871
GSMUA_Achr10G22350_001
Musa acuminata
GSMUA_Achr10G22350_001
I
0.871
Traes_4AL_B44DF4ACC
Triticum aestivum
Traes_4AL_B44DF4ACC
I
0.871
Solyc02g088180.2
Solanum lycopersicum
Solyc02g088180.2
I
0.871
TRIUR3_27612
Triticum urartu
TRIUR3_27612
I
0.871
PGSC0003DMG400001338
Solanum tuberosum
PGSC0003DMG400001338
I
0.871
MLOC_68284
Hordeum vulgare
MLOC_68284
I
0.871
MDP0000135860
Malus domestica
MDP0000135860
I
0.871