CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si015498m.g
(
Setaria italica
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Si015498m.g
T295723_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC031
M07182_2.00
Arabidopsis thaliana
NTWDCKTGTNNHWYACGY
RCGTRWDNNACAMGHWAN
Dap-seq
OMalley et al.(2016)
CUC3_col_a
0.905
0.737
NAC031
M07183_2.00
Arabidopsis thaliana
CKTGTNNHDCACGYHA
TDRCGTGHDNNACAMG
Dap-seq
OMalley et al.(2016)
CUC3_colamp_a
0.905
0.737
NAC098
M07239_2.00
Arabidopsis thaliana
CKTGTNNNDYAMGYHA
TDRCKTRHNNNACAMG
Dap-seq
OMalley et al.(2016)
CUC2_colamp_a
0.899
0.754
NAC098
M07240_2.00
Arabidopsis thaliana
NNNTWNCKTGHNNHWCAMG
CKTGWDNNDCAMGNWANNN
Dap-seq
OMalley et al.(2016)
CUC2_col
0.899
0.754
e_gw1.288.15.1
M02381_2.00
Physcomitrella patens
NNNBAMKNHW
WDNMKTVNNN
PBM
Weirauch et al.(2014)
pTH8467
0.877
0.746
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si015498m
NAC/NAM
30
156
PPGFRFHPTDEELVTFYLAAKVFNGACCGVDIAEVDLNRCEPWELPEAARMGEREWYFFSLRDRKYPTGMRTNRATGAGYWKATGKDREVLNTATGALLGMKKTLVFYKGRAPRGEKTKWVLHEYRL
Links
Other
NAC/NAM
family TFs
Other
Setaria italica
TFs
161 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Fb01938
Panicum virgatum
Pavir.Fb01938
I
0.970
Pavir.Fa00294
Panicum virgatum
Pavir.Fa00294
I
0.969
Pavir.Fa00438
Panicum virgatum
Pavir.Fa00438
I
0.969
GRMZM2G430522
Zea mays
GRMZM2G430522
I
0.968
Sb07g027650
Sorghum bicolor
Sb07g027650
I
0.968
OB08G27000
Oryza brachyantha
OB08G27000
I
0.967
GSMUA_Achr9G20090_001
Musa acuminata
GSMUA_Achr9G20090_001
I
0.957
MLOC_13932
Hordeum vulgare
MLOC_13932
I
0.951
POPTR_0002s00730
Populus trichocarpa
POPTR_0002s00730
I
0.951
ONIVA08G22710
Oryza nivara
ONIVA08G22710
I
0.950
BGIOSGA026695
Oryza indica
BGIOSGA026695
I
0.950
Eucgr.F03588
Eucalyptus grandis
Eucgr.F03588
I
0.950
SapurV1A.0016s0340
Salix purpurea
SapurV1A.0016s0340
I
0.949
OS08G0511200
Oryza sativa
OS08G0511200
I
0.949
OGLUM08G21360
Oryza glumaepatula
OGLUM08G21360
I
0.949
ORUFI08G22550
Oryza rufipogon
ORUFI08G22550
I
0.949
ORGLA08G0177600
Oryza glaberrima
ORGLA08G0177600
I
0.949
gene31474-v1.0-hybrid
Fragaria vesca
gene31474-v1.0-hybrid
I
0.947
Gorai.009G186000
Gossypium raimondii
Gorai.009G186000
I
0.945
OPUNC08G18240
Oryza punctata
OPUNC08G18240
I
0.945
Lus10013205.g
Linum usitatissimum
Lus10013205.g
I
0.944
POPTR_0005s27720
Populus trichocarpa
POPTR_0005s27720
I
0.944
cassava21580.m1
Manihot esculenta
cassava21580.m1
I
0.944
SapurV1A.0266s0070
Salix purpurea
SapurV1A.0266s0070
I
0.944
CUC3
Vitis vinifera
VIT_18s0122g00800
I
0.944
orange1.1g016283m.g
Citrus sinensis
orange1.1g016283m.g
I
0.943
Ciclev10001403m.g
Citrus clementina
Ciclev10001403m.g
I
0.943
Pm022916
Prunus mume
Pm022916
I
0.943
TCM_034835
Theobroma cacao
TCM_034835
I
0.942
30170.m014236
Ricinus communis
30170.m014236
I
0.942
Gorai.002G113300
Gossypium raimondii
Gorai.002G113300
I
0.939
Lus10030723.g
Linum usitatissimum
Lus10030723.g
I
0.938
mgf023466m
Mimulus guttatus
mgf023466m
I
0.938
PRUPE_ppa022238mg
Prunus persica
PRUPE_ppa022238mg
I
0.937
cassava21054.m1
Manihot esculenta
cassava21054.m1
I
0.936
Cucsa.272370
Cucumis sativus
Cucsa.272370
I
0.935
Aquca_015_00272
Aquilegia coerulea
Aquca_015_00272
I
0.935
Cla023834
Citrullus lanatus
Cla023834
I
0.935
LPERR08G17020
Leersia perrieri
LPERR08G17020
I
0.933
Aquca_007_00948
Aquilegia coerulea
Aquca_007_00948
I
0.930
Bra008259
Brassica rapa
Bra008259
I
0.929
Bo6g120460
Brassica oleracea
Bo6g120460
I
0.929
Bra015750
Brassica rapa
Bra015750
I
0.929
OLONG_023103
Oryza longistaminata
OLONG_023103
I
0.927
PK13964.1
Cannabis sativa
PK13964.1
I
0.926
MDP0000167208
Malus domestica
MDP0000167208
I
0.924
MDP0000191344
Malus domestica
MDP0000191344
I
0.924
Thhalv10019493m.g
Eutrema salsugineum
Thhalv10019493m.g
I
0.922
evm.TU.supercontig_286.12
Carica papaya
evm.TU.supercontig_286.12
I
0.922
mgf018675m
Mimulus guttatus
mgf018675m
I
0.920
ORUFI06G14810
Oryza rufipogon
ORUFI06G14810
I
0.917
ORGLA06G0124600
Oryza glaberrima
ORGLA06G0124600
I
0.917
BGIOSGA022861
Oryza indica
BGIOSGA022861
I
0.917
OBART06G13940
Oryza barthii
OBART06G13940
I
0.917
Bo2g089890
Brassica oleracea
Bo2g089890
I
0.917
OPUNC06G13130
Oryza punctata
OPUNC06G13130
I
0.917
OS06G0344900
Oryza sativa
OS06G0344900
I
0.917
OB06G22100
Oryza brachyantha
OB06G22100
I
0.917
OGLUM06G14810
Oryza glumaepatula
OGLUM06G14810
I
0.917
ONIVA03G33370
Oryza nivara
ONIVA03G33370
I
0.917
OLONG_019251
Oryza longistaminata
OLONG_019251
I
0.917
LPERR06G12840
Leersia perrieri
LPERR06G12840
I
0.914
Bostr.20129s0079
Boechera stricta
Bostr.20129s0079
I
0.911
MDP0000135860
Malus domestica
MDP0000135860
I
0.908
Carubv10022061m.g
Capsella rubella
Carubv10022061m.g
I
0.908
Cagra.0799s0114
Capsella grandiflora
Cagra.0799s0114
I
0.908
Sb02g028870
Sorghum bicolor
Sb02g028870
I
0.907
OPUNC09G13640
Oryza punctata
OPUNC09G13640
I
0.907
Pavir.J02772
Panicum virgatum
Pavir.J02772
I
0.907
OBART09G15220
Oryza barthii
OBART09G15220
I
0.907
Si030187m.g
Setaria italica
Si030187m.g
I
0.907
ORGLA09G0117400
Oryza glaberrima
ORGLA09G0117400
I
0.907
OGLUM09G15820
Oryza glumaepatula
OGLUM09G15820
I
0.907
OLONG_009674
Oryza longistaminata
OLONG_009674
I
0.907
OS09G0497900
Oryza sativa
OS09G0497900
I
0.907
ORUFI09G16430
Oryza rufipogon
ORUFI09G16430
I
0.907
BGIOSGA029508
Oryza indica
BGIOSGA029508
I
0.907
ONIVA09G15800
Oryza nivara
ONIVA09G15800
I
0.907
OMERI07G04410
Oryza meridionalis
OMERI07G04410
I
0.907
LPERR09G11330
Leersia perrieri
LPERR09G11330
I
0.907
NAC031
Arabidopsis thaliana
AT1G76420
D
0.905
Ca_22370
Cicer arietinum
Ca_22370
I
0.905
CUC3
Arabidopsis lyrata
fgenesh2_kg.2__1929__AT1G76420.1
I
0.904
TCM_031619
Theobroma cacao
TCM_031619
I
0.904
Gorai.002G067300
Gossypium raimondii
Gorai.002G067300
I
0.904
27950.m000105
Ricinus communis
27950.m000105
I
0.904
evm.TU.supercontig_131.88
Carica papaya
evm.TU.supercontig_131.88
I
0.904
GRMZM2G139700
Zea mays
GRMZM2G139700
I
0.902
AMTR_s00058p00136280
Amborella trichopoda
AMTR_s00058p00136280
I
0.901
Lus10005537.g
Linum usitatissimum
Lus10005537.g
I
0.901
Lus10041924.g
Linum usitatissimum
Lus10041924.g
I
0.901
Pm011397
Prunus mume
Pm011397
I
0.900
cassava44869.m1
Manihot esculenta
cassava44869.m1
I
0.900
MDP0000310981
Malus domestica
MDP0000310981
I
0.900
PRUPE_ppa026810mg
Prunus persica
PRUPE_ppa026810mg
I
0.900
CUC2
Arabidopsis lyrata
Al_scaffold_0008_1815
I
0.899
Carubv10028330m.g
Capsella rubella
Carubv10028330m.g
I
0.899
NAC098
Arabidopsis thaliana
AT5G53950
D
0.899
Cagra.4622s0005
Capsella grandiflora
Cagra.4622s0005
I
0.899
Thhalv10013863m.g
Eutrema salsugineum
Thhalv10013863m.g
I
0.899
Bostr.26833s0880
Boechera stricta
Bostr.26833s0880
I
0.899
Bo9g113820
Brassica oleracea
Bo9g113820
I
0.899
Pavir.J00978
Panicum virgatum
Pavir.J00978
I
0.898
Si007886m.g
Setaria italica
Si007886m.g
I
0.898
GRMZM2G393433
Zea mays
GRMZM2G393433
I
0.898
AMTR_s00022p00160350
Amborella trichopoda
AMTR_s00022p00160350
I
0.898
Sb08g006330
Sorghum bicolor
Sb08g006330
I
0.898
GRMZM2G386163
Zea mays
GRMZM2G386163
I
0.896
Gorai.013G171300
Gossypium raimondii
Gorai.013G171300
I
0.896
SapurV1A.1325s0010
Salix purpurea
SapurV1A.1325s0010
I
0.894
SapurV1A.2059s0010
Salix purpurea
SapurV1A.2059s0010
I
0.894
POPTR_0011s11600
Populus trichocarpa
POPTR_0011s11600
I
0.894
VIT_19s0014g02200
Vitis vinifera
VIT_19s0014g02200
I
0.894
GLYMA09G37050
Glycine max
GLYMA09G37050
I
0.893
orange1.1g018950m.g
Citrus sinensis
orange1.1g018950m.g
I
0.893
Ciclev10012093m.g
Citrus clementina
Ciclev10012093m.g
I
0.893
GLYMA13G05540
Glycine max
GLYMA13G05540
I
0.891
LjSGA_071377.1
Lotus japonicus
LjSGA_071377.1
I
0.891
GSMUA_Achr10G22350_001
Musa acuminata
GSMUA_Achr10G22350_001
I
0.890
Cla023717
Citrullus lanatus
Cla023717
I
0.890
Cucsa.122890
Cucumis sativus
Cucsa.122890
I
0.890
GLYMA06G35660
Glycine max
GLYMA06G35660
I
0.889
GLYMA12G26190
Glycine max
GLYMA12G26190
I
0.889
orange1.1g047710m.g
Citrus sinensis
orange1.1g047710m.g
I
0.889
Ciclev10008619m.g
Citrus clementina
Ciclev10008619m.g
I
0.889
BRADI4G34157
Brachypodium distachyon
BRADI4G34157
I
0.887
Bo2g043280
Brassica oleracea
Bo2g043280
I
0.886
Bra022685
Brassica rapa
Bra022685
I
0.886
VIT_14s0108g01070
Vitis vinifera
VIT_14s0108g01070
I
0.886
Ca_22532
Cicer arietinum
Ca_22532
I
0.885
AMTR_s00010p00266320
Amborella trichopoda
AMTR_s00010p00266320
I
0.885
GLYMA18G49620
Glycine max
GLYMA18G49620
I
0.884
MTR_3g070030
Medicago truncatula
MTR_3g070030
I
0.884
F775_20638
Aegilops tauschii
F775_20638
I
0.882
MLOC_65286
Hordeum vulgare
MLOC_65286
I
0.882
Gorai.007G323900
Gossypium raimondii
Gorai.007G323900
I
0.882
Traes_7AL_74CC91D39
Triticum aestivum
Traes_7AL_74CC91D39
I
0.882
GLYMA12G35530
Glycine max
GLYMA12G35530
I
0.881
GLYMA13G34950
Glycine max
GLYMA13G34950
I
0.881
GLYMA19G02850
Glycine max
GLYMA19G02850
I
0.881
MTR_2g078700
Medicago truncatula
MTR_2g078700
I
0.880
Aquca_033_00035
Aquilegia coerulea
Aquca_033_00035
I
0.880
TCM_018621
Theobroma cacao
TCM_018621
I
0.880
MDP0000198235
Malus domestica
MDP0000198235
I
0.880
chr3.CM0282.730.nc
Lotus japonicus
chr3.CM0282.730.nc
I
0.879
PRUPE_ppa007883mg
Prunus persica
PRUPE_ppa007883mg
I
0.878
Solyc02g088180.2
Solanum lycopersicum
Solyc02g088180.2
I
0.878
Solyc07g062840.2
Solanum lycopersicum
Solyc07g062840.2
I
0.878
PGSC0003DMG400001338
Solanum tuberosum
PGSC0003DMG400001338
I
0.878
gene00971-v1.0-hybrid
Fragaria vesca
gene00971-v1.0-hybrid
I
0.878
mgf017531m
Mimulus guttatus
mgf017531m
I
0.878
POPTR_0001s40680
Populus trichocarpa
POPTR_0001s40680
I
0.877
SapurV1A.0207s0120
Salix purpurea
SapurV1A.0207s0120
I
0.877
e_gw1.288.15.1
Physcomitrella patens
e_gw1.288.15.1
D
0.877
OB09G21720
Oryza brachyantha
OB09G21720
I
0.876
MDP0000276765
Malus domestica
MDP0000276765
I
0.874
Gorai.007G079900
Gossypium raimondii
Gorai.007G079900
I
0.874
Eucgr.I01958
Eucalyptus grandis
Eucgr.I01958
I
0.874
Pm015914
Prunus mume
Pm015914
I
0.873
PGSC0003DMG400009920
Solanum tuberosum
PGSC0003DMG400009920
I
0.873
OB04G22290
Oryza brachyantha
OB04G22290
I
0.871