Solyc03g083880.2 (Solanum lycopersicum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Solyc03g083880.2 T295836_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC105
M00980_2.00 		Arabidopsis thaliana
NYWHKNHWNN
NNWDNMDWRN		 PBM
Lindemose et al.(2014)
VND3 		0.888 0.777
NAC105
M07245_2.00 		Arabidopsis thaliana
NTTGCTTVNNNHNYAMG
CKTRNDNNNBAAGCAAN		 Dap-seq
OMalley et al.(2016)
VND3_colamp_a 		0.888 0.777
NAC105
M07246_2.00 		Arabidopsis thaliana
TTGCTTVHNNHNYAMG
CKTRNDNNDBAAGCAA		 Dap-seq
OMalley et al.(2016)
VND3_col 		0.888 0.777
NAC037
M07187_2.00 		Arabidopsis thaliana
CKTVNDNHNYAMG
CKTRNDNHNBAMG		 Dap-seq
OMalley et al.(2016)
VND1_col_a 		0.882 0.786
NAC007
M07164_2.00 		Arabidopsis thaliana
TTRCKTVHDNNNYAMG
CKTRNNNHDBAMGYAA		 Dap-seq
OMalley et al.(2016)
VND4_colamp_a 		0.881 0.777
NAC007
M07165_2.00 		Arabidopsis thaliana
TGCKTVHDNHDYAMG
CKTRHDNHDBAMGCA		 Dap-seq
OMalley et al.(2016)
VND4_col 		0.881 0.777
ANAC076
M07224_2.00 		Arabidopsis thaliana
TRCKTVHNNHNYAMG
CKTRNDNNDBAMGYA		 Dap-seq
OMalley et al.(2016)
VND2_col_a 		0.871 0.768
ANAC076
M07225_2.00 		Arabidopsis thaliana
TTGCKTVHNNHNYAMGYHAHNNN
NNNDTDRCKTRNDNNDBAMGCAA		 Dap-seq
OMalley et al.(2016)
VND2_colamp_a 		0.871 0.768
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc03g083880.2.1 NAC/NAM 8 135

Links

Other NAC/NAM family TFs
Other Solanum lycopersicum TFs

145 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
orange1.1g018596m.g Citrus sinensis orange1.1g018596m.g I 0.923
Eucgr.A02887 Eucalyptus grandis Eucgr.A02887 I 0.921
Ciclev10006988m.g Citrus clementina Ciclev10006988m.g I 0.921
Gorai.001G048200 Gossypium raimondii Gorai.001G048200 I 0.921
Gorai.003G114100 Gossypium raimondii Gorai.003G114100 I 0.921
Solyc08g079120.1 Solanum lycopersicum Solyc08g079120.1 I 0.921
TCM_014939 Theobroma cacao TCM_014939 I 0.921
mgf021916m Mimulus guttatus mgf021916m I 0.920
PK28510.1 Cannabis sativa PK28510.1 I 0.920
PGSC0003DMG400021576 Solanum tuberosum PGSC0003DMG400021576 I 0.919
GLYMA04G13660 Glycine max GLYMA04G13660 I 0.919
Solyc06g034340.1 Solanum lycopersicum Solyc06g034340.1 I 0.919
POPTR_0015s14770 Populus trichocarpa POPTR_0015s14770 I 0.917
GLYMA06G47680 Glycine max GLYMA06G47680 I 0.917
PRUPE_ppa020139mg Prunus persica PRUPE_ppa020139mg I 0.917
30147.m014211 Ricinus communis 30147.m014211 I 0.917
Cucsa.251620 Cucumis sativus Cucsa.251620 I 0.917
Pm019490 Prunus mume Pm019490 I 0.917
Pm019488 Prunus mume Pm019488 I 0.917
VIT_16s0022g00690 Vitis vinifera VIT_16s0022g00690 I 0.917
Cla006372 Citrullus lanatus Cla006372 I 0.917
gene21248-v1.0-hybrid Fragaria vesca gene21248-v1.0-hybrid I 0.915
cassava47039.m1 Manihot esculenta cassava47039.m1 I 0.915
POPTR_0012s14660 Populus trichocarpa POPTR_0012s14660 I 0.914
MTR_5g021710 Medicago truncatula MTR_5g021710 I 0.911
SapurV1A.0129s0210 Salix purpurea SapurV1A.0129s0210 I 0.911
Lus10031721.g Linum usitatissimum Lus10031721.g I 0.909
Lus10031142.g Linum usitatissimum Lus10031142.g I 0.909
mgf020336m Mimulus guttatus mgf020336m I 0.908
PGSC0003DMG400004740 Solanum tuberosum PGSC0003DMG400004740 I 0.907
GLYMA11G07990 Glycine max GLYMA11G07990 I 0.907
GLYMA09G36600 Glycine max GLYMA09G36600 I 0.907
GLYMA01G37310 Glycine max GLYMA01G37310 I 0.907
Ca_01981 Cicer arietinum Ca_01981 I 0.907
SELMODRAFT_57388 Selaginella moellendorffii SELMODRAFT_57388 I 0.906
GLYMA12G00760 Glycine max GLYMA12G00760 I 0.906
SELMODRAFT_451784 Selaginella moellendorffii SELMODRAFT_451784 I 0.906
Lus10024601.g Linum usitatissimum Lus10024601.g I 0.904
SapurV1A.0634s0120 Salix purpurea SapurV1A.0634s0120 I 0.904
evm.TU.supercontig_29.118 Carica papaya evm.TU.supercontig_29.118 I 0.904
SapurV1A.0367s0210 Salix purpurea SapurV1A.0367s0210 I 0.904
PK23416.1 Cannabis sativa PK23416.1 I 0.904
Gorai.007G048000 Gossypium raimondii Gorai.007G048000 I 0.903
GLYMA02G05620 Glycine max GLYMA02G05620 I 0.902
ANAC105 Arabidopsis lyrata fgenesh2_kg.8__2792__AT5G66300.1 I 0.902
Cagra.10427s0040 Capsella grandiflora Cagra.10427s0040 I 0.902
Carubv10026898m.g Capsella rubella Carubv10026898m.g I 0.902
Bra012065 Brassica rapa Bra012065 I 0.902
Bo7g065010 Brassica oleracea Bo7g065010 I 0.902
Bostr.0568s0042 Boechera stricta Bostr.0568s0042 I 0.902
cassava46384.m1 Manihot esculenta cassava46384.m1 I 0.901
Aquca_013_00692 Aquilegia coerulea Aquca_013_00692 I 0.901
Ciclev10024218m.g Citrus clementina Ciclev10024218m.g I 0.900
evm.TU.supercontig_3.311 Carica papaya evm.TU.supercontig_3.311 I 0.900
gene32254-v1.0-hybrid Fragaria vesca gene32254-v1.0-hybrid I 0.900
28200.m000189 Ricinus communis 28200.m000189 I 0.900
TCM_016035 Theobroma cacao TCM_016035 I 0.900
VIT_02s0154g00020 Vitis vinifera VIT_02s0154g00020 I 0.900
orange1.1g020354m.g Citrus sinensis orange1.1g020354m.g I 0.900
POPTR_0003s11250 Populus trichocarpa POPTR_0003s11250 I 0.900
SapurV1A.1275s0070 Salix purpurea SapurV1A.1275s0070 I 0.900
POPTR_0001s00220 Populus trichocarpa POPTR_0001s00220 I 0.900
AMTR_s00011p00251570 Amborella trichopoda AMTR_s00011p00251570 I 0.899
Lus10004338.g Linum usitatissimum Lus10004338.g I 0.899
MDP0000226701 Malus domestica MDP0000226701 I 0.899
Cucsa.320590 Cucumis sativus Cucsa.320590 I 0.898
MDP0000320566 Malus domestica MDP0000320566 I 0.898
Lus10032238.g Linum usitatissimum Lus10032238.g I 0.898
GLYMA16G24200 Glycine max GLYMA16G24200 I 0.897
Cucsa.302120 Cucumis sativus Cucsa.302120 I 0.896
Gorai.008G236400 Gossypium raimondii Gorai.008G236400 I 0.895
GLYMA11G03340 Glycine max GLYMA11G03340 I 0.894
PRUPE_ppa015786mg Prunus persica PRUPE_ppa015786mg I 0.894
Thhalv10005380m.g Eutrema salsugineum Thhalv10005380m.g I 0.894
Pm023559 Prunus mume Pm023559 I 0.894
POPTR_0007s13910 Populus trichocarpa POPTR_0007s13910 I 0.891
MTR_4g101680 Medicago truncatula MTR_4g101680 I 0.890
Aquca_007_00369 Aquilegia coerulea Aquca_007_00369 I 0.890
GLYMA05G04250 Glycine max GLYMA05G04250 I 0.889
GLYMA17G14700 Glycine max GLYMA17G14700 I 0.889
SELMODRAFT_89986 Selaginella moellendorffii SELMODRAFT_89986 I 0.888
MTR_4g036030 Medicago truncatula MTR_4g036030 I 0.888
NAC105 Arabidopsis thaliana AT5G66300 D 0.888
SELMODRAFT_93824 Selaginella moellendorffii SELMODRAFT_93824 I 0.888
MTR_5g012080 Medicago truncatula MTR_5g012080 I 0.888
LjSGA_069569.1 Lotus japonicus LjSGA_069569.1 I 0.888
Bra039915 Brassica rapa Bra039915 I 0.886
Sb01g030760 Sorghum bicolor Sb01g030760 I 0.886
Bostr.22157s0066 Boechera stricta Bostr.22157s0066 I 0.884
Cla005768 Citrullus lanatus Cla005768 I 0.884
Ca_02365 Cicer arietinum Ca_02365 I 0.882
NAC037 Arabidopsis thaliana AT2G18060 D 0.882
Carubv10022351m.g Capsella rubella Carubv10022351m.g I 0.881
Carubv10009366m.g Capsella rubella Carubv10009366m.g I 0.881
Thhalv10022756m.g Eutrema salsugineum Thhalv10022756m.g I 0.881
Cagra.1670s0031 Capsella grandiflora Cagra.1670s0031 I 0.881
NAC007 Arabidopsis thaliana AT1G12260 D 0.881
Thhalv10007823m.g Eutrema salsugineum Thhalv10007823m.g I 0.881
Cucsa.043420 Cucumis sativus Cucsa.043420 I 0.881
SELMODRAFT_402243 Selaginella moellendorffii SELMODRAFT_402243 I 0.881
SELMODRAFT_408624 Selaginella moellendorffii SELMODRAFT_408624 I 0.881
Bo8g108300 Brassica oleracea Bo8g108300 I 0.881
Bo8g062650 Brassica oleracea Bo8g062650 I 0.881
VND4 Arabidopsis lyrata fgenesh2_kg.1__1330__AT1G12260.1 I 0.881
Bra016783 Brassica rapa Bra016783 I 0.881
Bra026981 Brassica rapa Bra026981 I 0.881
Bostr.13671s0233 Boechera stricta Bostr.13671s0233 I 0.881
Cagra.0568s0135 Capsella grandiflora Cagra.0568s0135 I 0.881
VND1 Arabidopsis lyrata Al_scaffold_0003_3772 I 0.880
PK11173.1 Cannabis sativa PK11173.1 I 0.878
Gorai.003G010700 Gossypium raimondii Gorai.003G010700 I 0.878
Solyc02g084350.2 Solanum lycopersicum Solyc02g084350.2 I 0.877
orange1.1g021187m.g Citrus sinensis orange1.1g021187m.g I 0.877
TCM_000235 Theobroma cacao TCM_000235 I 0.877
PGSC0003DMG401003552 Solanum tuberosum PGSC0003DMG401003552 I 0.877
PDK_20s1306451g001 Phoenix dactylifera PDK_20s1306451g001 I 0.877
Ciclev10026114m.g Citrus clementina Ciclev10026114m.g I 0.877
Gorai.007G196400 Gossypium raimondii Gorai.007G196400 I 0.877
cassava24947.valid.m1 Manihot esculenta cassava24947.valid.m1 I 0.877
POPTR_0005s11870 Populus trichocarpa POPTR_0005s11870 I 0.877
ANAC076 Vitis vinifera VIT_04s0023g03110 I 0.877
SapurV1A.0487s0230 Salix purpurea SapurV1A.0487s0230 I 0.877
Bra019750 Brassica rapa Bra019750 I 0.877
Eucgr.I02366 Eucalyptus grandis Eucgr.I02366 I 0.877
Bo5g017120 Brassica oleracea Bo5g017120 I 0.877
evm.TU.supercontig_6.226 Carica papaya evm.TU.supercontig_6.226 I 0.877
Bo7g011640 Brassica oleracea Bo7g011640 I 0.876
Gorai.003G169000 Gossypium raimondii Gorai.003G169000 I 0.875
Bo3g093950 Brassica oleracea Bo3g093950 I 0.874
VND5 Arabidopsis lyrata fgenesh2_kg.2__212__AT1G62700.1 I 0.874
GSMUA_Achr8G12100_001 Musa acuminata GSMUA_Achr8G12100_001 I 0.873
mgf022574m Mimulus guttatus mgf022574m I 0.873
GSMUA_Achr11G03040_001 Musa acuminata GSMUA_Achr11G03040_001 I 0.873
cassava26615.m1 Manihot esculenta cassava26615.m1 I 0.873
28623.m000400 Ricinus communis 28623.m000400 I 0.872
Gorai.008G063600 Gossypium raimondii Gorai.008G063600 I 0.872
Carubv10004997m.g Capsella rubella Carubv10004997m.g I 0.871
Bo1g005810 Brassica oleracea Bo1g005810 I 0.871
ANAC076 Arabidopsis lyrata fgenesh2_kg.7__450__AT4G36160.1 I 0.871
Bra011667 Brassica rapa Bra011667 I 0.871
ANAC076 Arabidopsis thaliana AT4G36160 D 0.871
Bo7g117820 Brassica oleracea Bo7g117820 I 0.871
Cagra.4734s0006 Capsella grandiflora Cagra.4734s0006 I 0.871
Bra017750 Brassica rapa Bra017750 I 0.871
Aquca_006_00155 Aquilegia coerulea Aquca_006_00155 I 0.870