Solyc04g005610.2 (Solanum lycopersicum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Solyc04g005610.2 T295842_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC029
M00973_2.00
Arabidopsis thaliana
NBACGBMWNN

NNWKVCGTVN
PBM
Lindemose et al.(2014)
NAP
0.928 0.875
NAC029
M02369_2.00
Arabidopsis thaliana
NRGTCAWNN

NNWTGACYN
PBM
Weirauch et al.(2014)
pTH8397
0.928 0.875
NAC029
M07180_2.00
Arabidopsis thaliana
NCGTVHNNNWYACGBMA

TKVCGTRWNNNDBACGN
Dap-seq
OMalley et al.(2016)
NAP_colamp_a
0.928 0.875
NAC029
M07181_2.00
Arabidopsis thaliana
WYACGBMAYYD

HRRTKVCGTRW
Dap-seq
OMalley et al.(2016)
NAP_col_v3a
0.928 0.875
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc04g005610.2.1 NAC/NAM 11 135

Links

Other NAC/NAM family TFs
Other Solanum lycopersicum TFs

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52 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action