CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Solyc06g074170.2
(
Solanum lycopersicum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Solyc06g074170.2
T295868_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC002
M00970_2.00
Arabidopsis thaliana
NBACGYAWMN
NKWTRCGTVN
PBM
Lindemose et al.(2014)
ATAF1
0.894
0.500
NAC002
M07159_2.00
Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND
HNRWDDNMDWDWNNNWYACGBM
Dap-seq
OMalley et al.(2016)
ATAF1_col_a
0.894
0.500
NAC002
M07160_2.00
Arabidopsis thaliana
YACGY
RCGTR
Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a
0.894
0.500
NAC48
M11084_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC6_01
0.890
0.500
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc06g074170.2.1
NAC/NAM
33
158
FPGFRFSPTDEELISYYLKKKLEGSDKCVEVISEVEIWKHEPWDLPAKSVIQSDNEWFFFSPRGRKYPNGSQSKRATESGYWKATGKERNVKSNSNIIGTKRTLVFHTGRAPKGQRTQWIMHEYCM
Links
Other
NAC/NAM
family TFs
Other
Solanum lycopersicum
TFs
211 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG400005892
Solanum tuberosum
PGSC0003DMG400005892
I
0.995
PGSC0003DMG400019615
Solanum tuberosum
PGSC0003DMG400019615
I
0.992
Solyc11g068750.1
Solanum lycopersicum
Solyc11g068750.1
I
0.992
gene08448-v1.0-hybrid
Fragaria vesca
gene08448-v1.0-hybrid
I
0.986
TCM_041332
Theobroma cacao
TCM_041332
N
0.986
Eucgr.J00531
Eucalyptus grandis
Eucgr.J00531
I
0.985
Gorai.006G113700
Gossypium raimondii
Gorai.006G113700
N
0.984
Gorai.009G083500
Gossypium raimondii
Gorai.009G083500
N
0.984
GLYMA12G31211
Glycine max
GLYMA12G31211
I
0.983
Ciclev10028618m.g
Citrus clementina
Ciclev10028618m.g
N
0.982
POPTR_0009s16290
Populus trichocarpa
POPTR_0009s16290
N
0.980
cassava16016.m1
Manihot esculenta
cassava16016.m1
N
0.977
30055.m001612
Ricinus communis
30055.m001612
N
0.976
SapurV1A.0561s0300
Salix purpurea
SapurV1A.0561s0300
N
0.975
evm.TU.supercontig_195.35
Carica papaya
evm.TU.supercontig_195.35
N
0.973
Lus10034183.g
Linum usitatissimum
Lus10034183.g
N
0.971
Lus10043402.g
Linum usitatissimum
Lus10043402.g
N
0.971
MDP0000133636
Malus domestica
MDP0000133636
N
0.968
anac060
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_5000902
N
0.966
Carubv10019187m.g
Capsella rubella
Carubv10019187m.g
N
0.965
Bo1g063720
Brassica oleracea
Bo1g063720
N
0.964
NAC60
Arabidopsis thaliana
AT3G44290
N
0.962
Bra021471
Brassica rapa
Bra021471
N
0.960
Bra006619
Brassica rapa
Bra006619
I
0.959
Bo3g016820
Brassica oleracea
Bo3g016820
I
0.959
Eucgr.B03823
Eucalyptus grandis
Eucgr.B03823
N
0.957
PRUPE_ppa008321mg
Prunus persica
PRUPE_ppa008321mg
N
0.956
Bra020182
Brassica rapa
Bra020182
N
0.953
Bo2g023820
Brassica oleracea
Bo2g023820
N
0.953
Bra002403
Brassica rapa
Bra002403
N
0.950
Lus10013316.g
Linum usitatissimum
Lus10013316.g
N
0.949
Lus10005204.g
Linum usitatissimum
Lus10005204.g
N
0.949
Cagra.0846s0004
Capsella grandiflora
Cagra.0846s0004
N
0.940
GSMUA_Achr11G16860_001
Musa acuminata
GSMUA_Achr11G16860_001
I
0.940
anac089
Arabidopsis lyrata
scaffold_602275.1
N
0.940
Bostr.26527s0049
Boechera stricta
Bostr.26527s0049
N
0.940
Carubv10001357m.g
Capsella rubella
Carubv10001357m.g
N
0.940
NAC089
Arabidopsis thaliana
AT5G22290
N
0.938
AMTR_s00018p00071850
Amborella trichopoda
AMTR_s00018p00071850
I
0.922
Gorai.006G088400
Gossypium raimondii
Gorai.006G088400
I
0.920
GRMZM2G003715
Zea mays
GRMZM2G003715
I
0.919
Bostr.0556s0726
Boechera stricta
Bostr.0556s0726
N
0.918
e_gw1.5.134.1
Physcomitrella patens
e_gw1.5.134.1
I
0.918
e_gw1.140.53.1
Physcomitrella patens
e_gw1.140.53.1
I
0.917
Ca_20988
Cicer arietinum
Ca_20988
I
0.917
e_gw1.164.18.1
Physcomitrella patens
e_gw1.164.18.1
I
0.917
Solyc03g080090.2
Solanum lycopersicum
Solyc03g080090.2
I
0.913
PRUPE_ppa017765mg
Prunus persica
PRUPE_ppa017765mg
I
0.912
SapurV1A.0093s0260
Salix purpurea
SapurV1A.0093s0260
I
0.912
Thhalv10002027m.g
Eutrema salsugineum
Thhalv10002027m.g
I
0.910
Bra027596
Brassica rapa
Bra027596
I
0.908
BRADI4G37327
Brachypodium distachyon
BRADI4G37327
I
0.908
Eucgr.K02303
Eucalyptus grandis
Eucgr.K02303
I
0.908
BGIOSGA031230
Oryza indica
BGIOSGA031230
I
0.907
ORGLA09G0151800
Oryza glaberrima
ORGLA09G0151800
I
0.907
evm.TU.contig_29561
Carica papaya
evm.TU.contig_29561
I
0.907
Thhalv10012158m.g
Eutrema salsugineum
Thhalv10012158m.g
I
0.907
OGLUM09G19480
Oryza glumaepatula
OGLUM09G19480
I
0.907
Aquca_009_00966
Aquilegia coerulea
Aquca_009_00966
I
0.907
OMERI09G14170
Oryza meridionalis
OMERI09G14170
I
0.907
ONIVA09G20130
Oryza nivara
ONIVA09G20130
I
0.907
e_gw1.259.4.1
Physcomitrella patens
e_gw1.259.4.1
I
0.906
PK07042.1
Cannabis sativa
PK07042.1
N
0.906
Sb02g032230
Sorghum bicolor
Sb02g032230
I
0.906
OB09G25590
Oryza brachyantha
OB09G25590
I
0.906
MLOC_37843
Hordeum vulgare
MLOC_37843
I
0.906
TRIUR3_13805
Triticum urartu
TRIUR3_13805
I
0.906
Traes_5DL_B69423A67
Triticum aestivum
Traes_5DL_B69423A67
I
0.906
Traes_5BL_8BE382FE3
Triticum aestivum
Traes_5BL_8BE382FE3
I
0.906
GSMUA_Achr4G32010_001
Musa acuminata
GSMUA_Achr4G32010_001
I
0.906
Pavir.Ba01386
Panicum virgatum
Pavir.Ba01386
I
0.905
Pavir.Bb02626
Panicum virgatum
Pavir.Bb02626
I
0.905
GSMUA_Achr7G21780_001
Musa acuminata
GSMUA_Achr7G21780_001
I
0.905
PGSC0003DMG400000555
Solanum tuberosum
PGSC0003DMG400000555
I
0.905
ATAF1
Arabidopsis lyrata
scaffold_100066.1
I
0.904
LPERR09G14720
Leersia perrieri
LPERR09G14720
I
0.904
Si032702m.g
Setaria italica
Si032702m.g
I
0.904
Bostr.25375s0002
Boechera stricta
Bostr.25375s0002
I
0.903
Pavir.Fb00405
Panicum virgatum
Pavir.Fb00405
I
0.903
MTR_8g023840
Medicago truncatula
MTR_8g023840
I
0.903
Aquca_014_00255
Aquilegia coerulea
Aquca_014_00255
I
0.903
e_gw1.117.35.1
Physcomitrella patens
e_gw1.117.35.1
I
0.903
e_gw1.164.26.1
Physcomitrella patens
e_gw1.164.26.1
I
0.902
GSMUA_Achr6G31580_001
Musa acuminata
GSMUA_Achr6G31580_001
I
0.901
Thhalv10002040m.g
Eutrema salsugineum
Thhalv10002040m.g
I
0.900
ANAC040
Arabidopsis lyrata
fgenesh2_kg.4__689__AT2G27300.1
I
0.900
GSMUA_Achr4G02390_001
Musa acuminata
GSMUA_Achr4G02390_001
I
0.899
GSMUA_Achr6G18720_001
Musa acuminata
GSMUA_Achr6G18720_001
I
0.898
cassava28909.valid.m1
Manihot esculenta
cassava28909.valid.m1
I
0.897
GLYMA14G24220
Glycine max
GLYMA14G24220
I
0.897
Pavir.Fa01901
Panicum virgatum
Pavir.Fa01901
I
0.897
Si013369m.g
Setaria italica
Si013369m.g
I
0.896
LPERR07G06440
Leersia perrieri
LPERR07G06440
I
0.896
mgf022344m
Mimulus guttatus
mgf022344m
I
0.895
SapurV1A.0740s0040
Salix purpurea
SapurV1A.0740s0040
I
0.895
Solyc04g009440.2
Solanum lycopersicum
Solyc04g009440.2
I
0.894
Cagra.1968s0112
Capsella grandiflora
Cagra.1968s0112
I
0.894
Carubv10009926m.g
Capsella rubella
Carubv10009926m.g
I
0.894
TCM_035160
Theobroma cacao
TCM_035160
I
0.894
Bostr.5325s0094
Boechera stricta
Bostr.5325s0094
I
0.894
Gorai.010G051900
Gossypium raimondii
Gorai.010G051900
I
0.894
GSMUA_AchrUn_randomG04060_001
Musa acuminata
GSMUA_AchrUn_randomG04060_001
I
0.894
OB05G24820
Oryza brachyantha
OB05G24820
I
0.894
Bra033239
Brassica rapa
Bra033239
I
0.894
SapurV1A.3767s0010
Salix purpurea
SapurV1A.3767s0010
I
0.894
NAC002
Arabidopsis thaliana
AT1G01720
D
0.894
Bo5g001100
Brassica oleracea
Bo5g001100
I
0.894
Traes_7DL_AB67A0B36
Triticum aestivum
Traes_7DL_AB67A0B36
I
0.893
Solyc11g017470.1
Solanum lycopersicum
Solyc11g017470.1
I
0.893
Traes_7BL_0C386426A
Triticum aestivum
Traes_7BL_0C386426A
I
0.893
Traes_7AL_669D4AE47
Triticum aestivum
Traes_7AL_669D4AE47
I
0.893
LPERR12G01440
Leersia perrieri
LPERR12G01440
I
0.893
BRADI3G16480
Brachypodium distachyon
BRADI3G16480
I
0.893
TRIUR3_32613
Triticum urartu
TRIUR3_32613
I
0.893
F775_30082
Aegilops tauschii
F775_30082
I
0.893
MLOC_50406
Hordeum vulgare
MLOC_50406
I
0.893
Cla011239
Citrullus lanatus
Cla011239
N
0.893
GLYMA14G36840
Glycine max
GLYMA14G36840
I
0.892
POPTR_0004s04920
Populus trichocarpa
POPTR_0004s04920
I
0.892
GLYMA13G39090
Glycine max
GLYMA13G39090
N
0.892
SapurV1A.0365s0200
Salix purpurea
SapurV1A.0365s0200
I
0.891
LPERR05G13490
Leersia perrieri
LPERR05G13490
I
0.891
Gorai.005G088800
Gossypium raimondii
Gorai.005G088800
I
0.891
ORGLA01G0334900
Oryza glaberrima
ORGLA01G0334900
I
0.890
TRAES3BF002300010CFD_g
Triticum aestivum
TRAES3BF002300010CFD_g
I
0.890
GRMZM2G162739
Zea mays
GRMZM2G162739
I
0.890
Sb03g041920
Sorghum bicolor
Sb03g041920
I
0.890
GRMZM2G079632
Zea mays
GRMZM2G079632
I
0.890
BRADI2G57100
Brachypodium distachyon
BRADI2G57100
I
0.890
F775_13961
Aegilops tauschii
F775_13961
I
0.890
F775_28813
Aegilops tauschii
F775_28813
I
0.890
ORUFI01G42940
Oryza rufipogon
ORUFI01G42940
I
0.890
Pm019659
Prunus mume
Pm019659
I
0.890
NAC48
Oryza sativa
OS01G0884300
D
0.890
OPUNC01G38300
Oryza punctata
OPUNC01G38300
I
0.890
OGLUM01G43820
Oryza glumaepatula
OGLUM01G43820
I
0.890
OBART01G39590
Oryza barthii
OBART01G39590
I
0.890
OB01G48340
Oryza brachyantha
OB01G48340
I
0.890
Sb02g006680
Sorghum bicolor
Sb02g006680
I
0.890
BGIOSGA000374
Oryza indica
BGIOSGA000374
I
0.890
LPERR01G34090
Leersia perrieri
LPERR01G34090
I
0.890
ONIVA01G44460
Oryza nivara
ONIVA01G44460
I
0.890
TRIUR3_14109
Triticum urartu
TRIUR3_14109
I
0.890
OMERI01G36460
Oryza meridionalis
OMERI01G36460
I
0.890
BGIOSGA019897
Oryza indica
BGIOSGA019897
I
0.889
GRMZM2G014653
Zea mays
GRMZM2G014653
I
0.889
ORGLA05G0146600
Oryza glaberrima
ORGLA05G0146600
I
0.889
OGLUM05G17980
Oryza glumaepatula
OGLUM05G17980
I
0.889
Si002413m.g
Setaria italica
Si002413m.g
I
0.889
ONIVA05G17670
Oryza nivara
ONIVA05G17670
I
0.889
MTR_2g086880
Medicago truncatula
MTR_2g086880
N
0.888
PK26157.1
Cannabis sativa
PK26157.1
I
0.888
anac032
Vitis vinifera
VIT_18s0001g02300
I
0.887
Sb07g003900
Sorghum bicolor
Sb07g003900
I
0.886
OGLUM08G03540
Oryza glumaepatula
OGLUM08G03540
I
0.886
Si022714m.g
Setaria italica
Si022714m.g
I
0.886
OMERI08G03500
Oryza meridionalis
OMERI08G03500
I
0.886
OLONG_000105
Oryza longistaminata
OLONG_000105
I
0.886
LPERR08G03510
Leersia perrieri
LPERR08G03510
I
0.886
GSMUA_Achr9G10040_001
Musa acuminata
GSMUA_Achr9G10040_001
I
0.886
OPUNC08G03310
Oryza punctata
OPUNC08G03310
I
0.886
ORGLA08G0029000
Oryza glaberrima
ORGLA08G0029000
I
0.886
OB08G13730
Oryza brachyantha
OB08G13730
I
0.886
OBART08G03460
Oryza barthii
OBART08G03460
I
0.886
VIT_19s0027g00910
Vitis vinifera
VIT_19s0027g00910
I
0.885
Pavir.Bb00806
Panicum virgatum
Pavir.Bb00806
I
0.885
Gorai.004G125900
Gossypium raimondii
Gorai.004G125900
I
0.885
MLOC_59162
Hordeum vulgare
MLOC_59162
I
0.885
Pavir.Ba03301
Panicum virgatum
Pavir.Ba03301
I
0.884
LPERR11G01300
Leersia perrieri
LPERR11G01300
I
0.884
Lus10032919.g
Linum usitatissimum
Lus10032919.g
I
0.883
Lus10015587.g
Linum usitatissimum
Lus10015587.g
I
0.883
POPTR_0005s07060
Populus trichocarpa
POPTR_0005s07060
I
0.883
SapurV1A.0311s0230
Salix purpurea
SapurV1A.0311s0230
I
0.883
Si030752m.g
Setaria italica
Si030752m.g
I
0.883
Bo5g002810
Brassica oleracea
Bo5g002810
I
0.882
VIT_06s0004g00020
Vitis vinifera
VIT_06s0004g00020
I
0.882
VIT_19s0027g00840
Vitis vinifera
VIT_19s0027g00840
I
0.882
GSMUA_Achr6G03200_001
Musa acuminata
GSMUA_Achr6G03200_001
N
0.881
Pavir.Ea00010
Panicum virgatum
Pavir.Ea00010
I
0.881
ORUFI05G18190
Oryza rufipogon
ORUFI05G18190
I
0.881
GSMUA_Achr3G00330_001
Musa acuminata
GSMUA_Achr3G00330_001
I
0.881
Ca_27204
Cicer arietinum
Ca_27204
I
0.881
TRIUR3_29260
Triticum urartu
TRIUR3_29260
I
0.880
F775_11764
Aegilops tauschii
F775_11764
I
0.880
Ca_07077
Cicer arietinum
Ca_07077
N
0.880
Traes_7DL_D05DA373C
Triticum aestivum
Traes_7DL_D05DA373C
I
0.880
MLOC_37364
Hordeum vulgare
MLOC_37364
I
0.880
Gorai.006G203800
Gossypium raimondii
Gorai.006G203800
I
0.879
SapurV1A.2021s0010
Salix purpurea
SapurV1A.2021s0010
I
0.877
POPTR_0007s04780
Populus trichocarpa
POPTR_0007s04780
I
0.877
SapurV1A.0024s0340
Salix purpurea
SapurV1A.0024s0340
I
0.876
TCM_015535
Theobroma cacao
TCM_015535
I
0.876
BGIOSGA027623
Oryza indica
BGIOSGA027623
I
0.875
OS08G0157900
Oryza sativa
OS08G0157900
I
0.875
ONIVA08G03440
Oryza nivara
ONIVA08G03440
I
0.875
ORUFI08G03870
Oryza rufipogon
ORUFI08G03870
I
0.875
OMERI01G15210
Oryza meridionalis
OMERI01G15210
I
0.874
OMERI01G15230
Oryza meridionalis
OMERI01G15230
I
0.874
MDP0000282616
Malus domestica
MDP0000282616
I
0.874
GSMUA_Achr10G08120_001
Musa acuminata
GSMUA_Achr10G08120_001
I
0.873
mgf013201m
Mimulus guttatus
mgf013201m
I
0.873
Pm028711
Prunus mume
Pm028711
I
0.873
SapurV1A.0076s0070
Salix purpurea
SapurV1A.0076s0070
I
0.873
Traes_7BL_8A5D12EE1
Triticum aestivum
Traes_7BL_8A5D12EE1
I
0.873
Bo5g002850
Brassica oleracea
Bo5g002850
I
0.872
Bostr.5325s0009
Boechera stricta
Bostr.5325s0009
I
0.872
SapurV1A.0039s0530
Salix purpurea
SapurV1A.0039s0530
I
0.871
mgf015836m
Mimulus guttatus
mgf015836m
I
0.871
GLYMA05G32850
Glycine max
GLYMA05G32850
I
0.871
Si004195m.g
Setaria italica
Si004195m.g
I
0.871