TCM_007543 (Theobroma cacao)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 TCM_007543 T295926_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC018
M07176_2.00 		Arabidopsis thaliana
DYACGBMAYYD
HRRTKVCGTRH		 Dap-seq
OMalley et al.(2016)
NAM_colamp_a 		0.878 0.553
NAC018
M07177_2.00 		Arabidopsis thaliana
WDNCKWNHNNNWYACGBMA
TKVCGTRWNNNDNWMGNHW		 Dap-seq
OMalley et al.(2016)
NAM_col_v3a 		0.878 0.553
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOX98865 NAC/NAM 9 126
EOX98866 NAC/NAM 58 175

Links

Other NAC/NAM family TFs
Other Theobroma cacao TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.005G217400 Gossypium raimondii Gorai.005G217400 N 0.967
GLYMA15G05690 Glycine max GLYMA15G05690 N 0.965
chr6.CM0314.510.nd Lotus japonicus chr6.CM0314.510.nd N 0.963
GLYMA08G08010 Glycine max GLYMA08G08010 N 0.963
Lus10000206.g Linum usitatissimum Lus10000206.g N 0.962
Lus10010747.g Linum usitatissimum Lus10010747.g N 0.962
Lus10035648.g Linum usitatissimum Lus10035648.g N 0.962
Lus10035647.g Linum usitatissimum Lus10035647.g N 0.962
GLYMA05G24910 Glycine max GLYMA05G24910 N 0.962
PGSC0003DMG400029741 Solanum tuberosum PGSC0003DMG400029741 N 0.961
NAC104 Arabidopsis thaliana AT5G64530 N 0.960
Bostr.0568s0345 Boechera stricta Bostr.0568s0345 N 0.960
Bo3g101220 Brassica oleracea Bo3g101220 N 0.960
ANAC104 Arabidopsis lyrata fgenesh2_kg.8__2481__AT5G64530.1 N 0.960
Bra024306 Brassica rapa Bra024306 N 0.960
Solyc01g104900.2 Solanum lycopersicum Solyc01g104900.2 N 0.959
PRUPE_ppa019508mg Prunus persica PRUPE_ppa019508mg N 0.959
ANAC104 Vitis vinifera VIT_12s0055g00510 N 0.959
Cla009592 Citrullus lanatus Cla009592 N 0.959
Pm004078 Prunus mume Pm004078 N 0.959
Bra031915 Brassica rapa Bra031915 N 0.959
Bo2g166280 Brassica oleracea Bo2g166280 N 0.959
Aquca_022_00269 Aquilegia coerulea Aquca_022_00269 N 0.958
chr4.CM0337.760.nc Lotus japonicus chr4.CM0337.760.nc N 0.958
GLYMA08G19300 Glycine max GLYMA08G19300 N 0.958
Cucsa.345830 Cucumis sativus Cucsa.345830 N 0.957
Bo9g018140 Brassica oleracea Bo9g018140 N 0.957
Bra037779 Brassica rapa Bra037779 N 0.956
MDP0000240094 Malus domestica MDP0000240094 N 0.955
Cagra.0248s0135 Capsella grandiflora Cagra.0248s0135 N 0.954
29683.m000467 Ricinus communis 29683.m000467 N 0.954
Carubv10027198m.g Capsella rubella Carubv10027198m.g N 0.954
Gorai.008G014700 Gossypium raimondii Gorai.008G014700 N 0.954
cassava1502.valid.m1 Manihot esculenta cassava1502.valid.m1 N 0.947
Eucgr.I02695 Eucalyptus grandis Eucgr.I02695 N 0.947
POPTR_0003s01720 Populus trichocarpa POPTR_0003s01720 N 0.947
MDP0000250487 Malus domestica MDP0000250487 N 0.942
POPTR_0001s21440 Populus trichocarpa POPTR_0001s21440 N 0.941
MTR_4g094302 Medicago truncatula MTR_4g094302 N 0.940
VIT_04s0044g01500 Vitis vinifera VIT_04s0044g01500 N 0.927
Thhalv10004805m.g Eutrema salsugineum Thhalv10004805m.g N 0.926
Gorai.013G063500 Gossypium raimondii Gorai.013G063500 N 0.924
evm.TU.supercontig_63.29 Carica papaya evm.TU.supercontig_63.29 N 0.924
Ca_05227 Cicer arietinum Ca_05227 N 0.923
orange1.1g029016m.g Citrus sinensis orange1.1g029016m.g N 0.922
Ciclev10002538m.g Citrus clementina Ciclev10002538m.g N 0.922
SapurV1A.0344s0360 Salix purpurea SapurV1A.0344s0360 I 0.918
PK12901.1 Cannabis sativa PK12901.1 N 0.905
SapurV1A.0869s0210 Salix purpurea SapurV1A.0869s0210 I 0.900
Thhalv10012308m.g Eutrema salsugineum Thhalv10012308m.g I 0.899
Bo6g030920 Brassica oleracea Bo6g030920 I 0.899
Bra018997 Brassica rapa Bra018997 I 0.899
POPTR_0007s04250 Populus trichocarpa POPTR_0007s04250 N 0.896
Ca_00111 Cicer arietinum Ca_00111 I 0.889
PGSC0003DMG400005501 Solanum tuberosum PGSC0003DMG400005501 N 0.880
POPTR_0005s06510 Populus trichocarpa POPTR_0005s06510 N 0.879
NAC018 Arabidopsis thaliana AT1G52880 D 0.878
Bostr.0124s0081 Boechera stricta Bostr.0124s0081 I 0.878
GLYMA06G15990 Glycine max GLYMA06G15990 N 0.873
Lus10011215.g Linum usitatissimum Lus10011215.g I 0.873
NAM Arabidopsis lyrata fgenesh2_kg.1__4366__AT1G52880.1 I 0.873
anac025 Vitis vinifera VIT_00s0375g00040 I 0.873
Lus10018469.g Linum usitatissimum Lus10018469.g I 0.873
Carubv10009524m.g Capsella rubella Carubv10009524m.g I 0.872
Cagra.0946s0024 Capsella grandiflora Cagra.0946s0024 I 0.872
Eucgr.B02485 Eucalyptus grandis Eucgr.B02485 I 0.871
SapurV1A.1092s0100 Salix purpurea SapurV1A.1092s0100 N 0.871