CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TCM_015535
(
Theobroma cacao
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
TCM_015535
T295937_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC69
M07216_2.00
Arabidopsis thaliana
WMCTTVTNNNNYAAG
CTTRNNNNABAAGKW
Dap-seq
OMalley et al.(2016)
NTM2_col_b
0.887
0.530
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOY23734
NAC/NAM
10
137
PVGFRFRPTDEELIDFYLRSKINGNRTDEVGVIREIDVCKWEPWDLPDLSAIATRDPEWFFFCPLDRKYPNGNRLNRATEAGYWKATGKDRKIKSGSSLIGMKKTLVFYTGRAPRGKRTNWVMHEYRT
EOY23735
NAC/NAM
10
137
PVGFRFRPTDEELIDFYLRSKINGNRTDEVGVIREIDVCKWEPWDLPDLSAIATRDPEWFFFCPLDRKYPNGNRLNRATEAGYWKATGKDRKIKSGSSLIGMKKTLVFYTGRAPRGKRTNWVMHEYRT
Links
Other
NAC/NAM
family TFs
Other
Theobroma cacao
TFs
127 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Gorai.006G203800
Gossypium raimondii
Gorai.006G203800
I
0.986
Gorai.004G125900
Gossypium raimondii
Gorai.004G125900
I
0.984
Lus10032919.g
Linum usitatissimum
Lus10032919.g
I
0.984
Lus10015587.g
Linum usitatissimum
Lus10015587.g
I
0.981
Gorai.007G017500
Gossypium raimondii
Gorai.007G017500
I
0.980
GLYMA14G36840
Glycine max
GLYMA14G36840
I
0.976
Ca_27204
Cicer arietinum
Ca_27204
I
0.974
MTR_5g069030
Medicago truncatula
MTR_5g069030
I
0.973
evm.TU.supercontig_3.170
Carica papaya
evm.TU.supercontig_3.170
N
0.971
MTR_3g093050
Medicago truncatula
MTR_3g093050
I
0.969
chr1.LjT41E18.160.nc
Lotus japonicus
chr1.LjT41E18.160.nc
I
0.968
Pm019659
Prunus mume
Pm019659
I
0.968
Ca_04069
Cicer arietinum
Ca_04069
I
0.967
MTR_8g023860
Medicago truncatula
MTR_8g023860
I
0.960
Solyc06g073050.2
Solanum lycopersicum
Solyc06g073050.2
N
0.956
Solyc03g080090.2
Solanum lycopersicum
Solyc03g080090.2
I
0.949
MTR_8g023840
Medicago truncatula
MTR_8g023840
I
0.949
VIT_15s0048g02320
Vitis vinifera
VIT_15s0048g02320
I
0.947
PGSC0003DMG400000555
Solanum tuberosum
PGSC0003DMG400000555
I
0.943
VIT_15s0048g02300
Vitis vinifera
VIT_15s0048g02300
N
0.941
MDP0000907489
Malus domestica
MDP0000907489
N
0.940
MTR_8g023930
Medicago truncatula
MTR_8g023930
I
0.937
Traes_7BL_0C386426A
Triticum aestivum
Traes_7BL_0C386426A
I
0.936
Traes_7DL_AB67A0B36
Triticum aestivum
Traes_7DL_AB67A0B36
I
0.936
TRIUR3_32613
Triticum urartu
TRIUR3_32613
I
0.936
BGIOSGA027623
Oryza indica
BGIOSGA027623
I
0.936
OS08G0157900
Oryza sativa
OS08G0157900
I
0.936
MLOC_50406
Hordeum vulgare
MLOC_50406
I
0.936
ORUFI08G03870
Oryza rufipogon
ORUFI08G03870
I
0.936
Pavir.Fb00405
Panicum virgatum
Pavir.Fb00405
I
0.936
F775_30082
Aegilops tauschii
F775_30082
I
0.936
Traes_7AL_669D4AE47
Triticum aestivum
Traes_7AL_669D4AE47
I
0.936
ONIVA08G03440
Oryza nivara
ONIVA08G03440
I
0.936
OLONG_000105
Oryza longistaminata
OLONG_000105
I
0.933
OMERI08G03500
Oryza meridionalis
OMERI08G03500
I
0.933
OPUNC08G03310
Oryza punctata
OPUNC08G03310
I
0.933
OGLUM08G03540
Oryza glumaepatula
OGLUM08G03540
I
0.933
ORGLA08G0029000
Oryza glaberrima
ORGLA08G0029000
I
0.933
OB08G13730
Oryza brachyantha
OB08G13730
I
0.933
OBART08G03460
Oryza barthii
OBART08G03460
I
0.933
Pavir.Fa01901
Panicum virgatum
Pavir.Fa01901
I
0.932
GSMUA_Achr3G00330_001
Musa acuminata
GSMUA_Achr3G00330_001
I
0.932
BRADI3G16480
Brachypodium distachyon
BRADI3G16480
I
0.932
GSMUA_AchrUn_randomG04060_001
Musa acuminata
GSMUA_AchrUn_randomG04060_001
I
0.931
Si013369m.g
Setaria italica
Si013369m.g
I
0.931
Bra033296
Brassica rapa
Bra033296
I
0.930
AMTR_s00018p00071850
Amborella trichopoda
AMTR_s00018p00071850
I
0.930
mgf022344m
Mimulus guttatus
mgf022344m
I
0.930
LPERR08G03510
Leersia perrieri
LPERR08G03510
I
0.928
Sb07g003900
Sorghum bicolor
Sb07g003900
I
0.926
GRMZM2G003715
Zea mays
GRMZM2G003715
I
0.926
Ca_20988
Cicer arietinum
Ca_20988
I
0.925
Bo9g004070
Brassica oleracea
Bo9g004070
I
0.920
Bra036328
Brassica rapa
Bra036328
I
0.916
GSMUA_Achr1G03560_001
Musa acuminata
GSMUA_Achr1G03560_001
I
0.915
Sb10g000101
Sorghum bicolor
Sb10g000101
N
0.914
Si006105m.g
Setaria italica
Si006105m.g
N
0.914
GRMZM2G163914
Zea mays
GRMZM2G163914
N
0.913
PGSC0003DMG402027023
Solanum tuberosum
PGSC0003DMG402027023
N
0.913
GSMUA_Achr4G29170_001
Musa acuminata
GSMUA_Achr4G29170_001
I
0.912
GSMUA_Achr2G11810_001
Musa acuminata
GSMUA_Achr2G11810_001
I
0.912
PRUPE_ppb017658mg
Prunus persica
PRUPE_ppb017658mg
I
0.909
POPTR_0002s18290
Populus trichocarpa
POPTR_0002s18290
I
0.907
gene08448-v1.0-hybrid
Fragaria vesca
gene08448-v1.0-hybrid
I
0.904
evm.TU.supercontig_195.35
Carica papaya
evm.TU.supercontig_195.35
N
0.904
cassava11768.valid.m1
Manihot esculenta
cassava11768.valid.m1
N
0.901
POPTR_0002s18320
Populus trichocarpa
POPTR_0002s18320
I
0.899
29764.m000758
Ricinus communis
29764.m000758
N
0.898
Eucgr.J00531
Eucalyptus grandis
Eucgr.J00531
I
0.897
Bo5g002860
Brassica oleracea
Bo5g002860
N
0.897
GLYMA12G31211
Glycine max
GLYMA12G31211
I
0.896
Pm028711
Prunus mume
Pm028711
I
0.895
GRMZM2G459156
Zea mays
GRMZM2G459156
N
0.893
Eucgr.I02571
Eucalyptus grandis
Eucgr.I02571
N
0.892
Bostr.0556s0726
Boechera stricta
Bostr.0556s0726
N
0.890
GSMUA_Achr11G16860_001
Musa acuminata
GSMUA_Achr11G16860_001
I
0.889
GSMUA_Achr11G07800_001
Musa acuminata
GSMUA_Achr11G07800_001
N
0.889
PGSC0003DMG400005892
Solanum tuberosum
PGSC0003DMG400005892
I
0.889
Bostr.4825s0023
Boechera stricta
Bostr.4825s0023
I
0.889
SapurV1A.0586s0170
Salix purpurea
SapurV1A.0586s0170
I
0.888
AMTR_s00018p00074980
Amborella trichopoda
AMTR_s00018p00074980
I
0.888
NAC69
Arabidopsis thaliana
AT4G01550
D
0.887
anac069
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_6002854
I
0.887
Thhalv10028684m.g
Eutrema salsugineum
Thhalv10028684m.g
I
0.886
mgf015836m
Mimulus guttatus
mgf015836m
I
0.886
POPTR_0014s07210
Populus trichocarpa
POPTR_0014s07210
I
0.885
POPTR_0002s15560
Populus trichocarpa
POPTR_0002s15560
I
0.884
POPTR_0002s18310
Populus trichocarpa
POPTR_0002s18310
I
0.883
gene23394-v1.0-hybrid
Fragaria vesca
gene23394-v1.0-hybrid
N
0.883
Bostr.5325s0009
Boechera stricta
Bostr.5325s0009
I
0.883
Pm028712
Prunus mume
Pm028712
N
0.882
PRUPE_ppa016876mg
Prunus persica
PRUPE_ppa016876mg
N
0.881
Carubv10003260m.g
Capsella rubella
Carubv10003260m.g
I
0.881
OPUNC06G00030
Oryza punctata
OPUNC06G00030
N
0.881
POPTR_0014s10360
Populus trichocarpa
POPTR_0014s10360
I
0.880
POPTR_0014s10350
Populus trichocarpa
POPTR_0014s10350
I
0.880
OLONG_004904
Oryza longistaminata
OLONG_004904
N
0.880
ONIVA06G00080
Oryza nivara
ONIVA06G00080
N
0.880
ORGLA06G0000500
Oryza glaberrima
ORGLA06G0000500
N
0.880
OGLUM06G00040
Oryza glumaepatula
OGLUM06G00040
N
0.880
OS06G0101800
Oryza sativa
OS06G0101800
N
0.880
BGIOSGA022116
Oryza indica
BGIOSGA022116
N
0.880
OBART06G00060
Oryza barthii
OBART06G00060
N
0.880
ORUFI06G00070
Oryza rufipogon
ORUFI06G00070
N
0.880
PRUPE_ppa022384mg
Prunus persica
PRUPE_ppa022384mg
I
0.879
MDP0000206868
Malus domestica
MDP0000206868
I
0.879
SapurV1A.0024s0340
Salix purpurea
SapurV1A.0024s0340
I
0.879
Bostr.5325s0019
Boechera stricta
Bostr.5325s0019
I
0.879
PGSC0003DMG400019615
Solanum tuberosum
PGSC0003DMG400019615
I
0.877
Solyc11g068750.1
Solanum lycopersicum
Solyc11g068750.1
I
0.877
Solyc06g074170.2
Solanum lycopersicum
Solyc06g074170.2
I
0.876
Traes_5DL_B69423A67
Triticum aestivum
Traes_5DL_B69423A67
I
0.876
Bra008553
Brassica rapa
Bra008553
I
0.876
Traes_5BL_8BE382FE3
Triticum aestivum
Traes_5BL_8BE382FE3
I
0.876
TRIUR3_13805
Triticum urartu
TRIUR3_13805
I
0.876
Eucgr.K02303
Eucalyptus grandis
Eucgr.K02303
I
0.876
MLOC_37843
Hordeum vulgare
MLOC_37843
I
0.876
Thhalv10007665m.g
Eutrema salsugineum
Thhalv10007665m.g
I
0.875
POPTR_0014s10330
Populus trichocarpa
POPTR_0014s10330
I
0.875
evm.TU.contig_29561
Carica papaya
evm.TU.contig_29561
I
0.875
Gorai.009G083500
Gossypium raimondii
Gorai.009G083500
N
0.874
Cla002432
Citrullus lanatus
Cla002432
N
0.873
Bo00853s060
Brassica oleracea
Bo00853s060
I
0.872
Cagra.1968s0045
Capsella grandiflora
Cagra.1968s0045
I
0.872
Carubv10009049m.g
Capsella rubella
Carubv10009049m.g
I
0.872
Si032702m.g
Setaria italica
Si032702m.g
I
0.871