TCM_029321 (Theobroma cacao)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 TCM_029321 T295973_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT3G12910
M07204_2.00
Arabidopsis thaliana
YGSCGKNDNDDHNMCGB

VCGKNDHHNHNMCGSCR
Dap-seq
OMalley et al.(2016)
AT3G12910_col_a
0.965 0.717
NAC002
M00970_2.00
Arabidopsis thaliana
NBACGYAWMN

NKWTRCGTVN
PBM
Lindemose et al.(2014)
ATAF1
0.922 0.566
NAC002
M07159_2.00
Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND

HNRWDDNMDWDWNNNWYACGBM
Dap-seq
OMalley et al.(2016)
ATAF1_col_a
0.922 0.566
NAC002
M07160_2.00
Arabidopsis thaliana
YACGY

RCGTR
Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a
0.922 0.566
NAC48
M11084_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC6_01
0.910 0.540
NAC101
M07241_2.00
Arabidopsis thaliana
TGCKTVNDNHNYAMG

CKTRNDNHNBAMGCA
Dap-seq
OMalley et al.(2016)
VND6_colamp_a
0.890 0.531
NAC101
M07242_2.00
Arabidopsis thaliana
TTGCKTVHDNNNYAMGYHWHN

NDWDRCKTRNNNHDBAMGCAA
Dap-seq
OMalley et al.(2016)
VND6_col_v31
0.890 0.531
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY27482 NAC/NAM 20 150

Links

Other NAC/NAM family TFs
Other Theobroma cacao TFs

Invalid Input OrderBy

203 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action