CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
TCM_036587
(
Theobroma cacao
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
TCM_036587
T295996_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANAC13
M07170_2.00
Arabidopsis thaliana
TDNCTTGYYNNNCAAG
CTTGNNNRRCAAGNHA
Dap-seq
OMalley et al.(2016)
ANAC013_col_a
0.874
0.746
ANAC13
M07171_2.00
Arabidopsis thaliana
CTTGYBHNNCAAGNHAH
DTDNCTTGNNDVRCAAG
Dap-seq
OMalley et al.(2016)
ANAC013_colamp_a
0.874
0.746
ANAC13
M11077_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANAC013_Q2
0.874
0.746
anac028
M01289_2.00
Arabidopsis thaliana
NTTGCGTRH
DYACGCAAN
PBM
Lambert et al.(2019)
pTH9962
0.873
0.693
anac028
M07179_2.00
Arabidopsis thaliana
CTTSHNNHDCAMGYWA
TWRCKTGHDNNDSAAG
Dap-seq
OMalley et al.(2016)
ANAC028_col_a
0.873
0.693
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOY17418
NAC/NAM
19
145
PPGFRFHPTDEELVLYYLKRKICRRKLKLDIIRETDVYKWDPEELPAQSILKSGDRQWFFFSPRDRKYPNGARSNRATRQGYWKATGKDRTITCNSRVVGVKKTLVFYGGRAPNGVRSDWVMHEYTL
EOY17419
NAC/NAM
1
89
KWDPEELPAQSILKSGDRQWFFFSPRDRKYPNGARSNRATRQGYWKATGKDRTITCNSRVVGVKKTLVFYGGRAPNGVRSDWVMHEYTL
EOY17420
NAC/NAM
1
89
KWDPEELPAQSILKSGDRQWFFFSPRDRKYPNGARSNRATRQGYWKATGKDRTITCNSRVVGVKKTLVFYGGRAPNGVRSDWVMHEYTL
EOY17421
NAC/NAM
19
145
PPGFRFHPTDEELVLYYLKRKICRRKLKLDIIRETDVYKWDPEELPAQSILKSGDRQWFFFSPRDRKYPNGARSNRATRQGYWKATGKDRTITCNSRVVGVKKTLVFYGGRAPNGVRSDWVMHEYTL
EOY17423
NAC/NAM
19
145
PPGFRFHPTDEELVLYYLKRKICRRKLKLDIIRETDVYKWDPEELPAQSILKSGDRQWFFFSPRDRKYPNGARSNRATRQGYWKATGKDRTITCNSRVVGVKKTLVFYGGRAPNGVRSDWVMHEYTL
Links
Other
NAC/NAM
family TFs
Other
Theobroma cacao
TFs
52 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy