TCM_043360 (Theobroma cacao)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 TCM_043360 T296009_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC078
M02372_2.00
Arabidopsis thaliana
NNRCAMGHMANN

NNTKDCKTGYNN
PBM
Weirauch et al.(2014)
pTH7209
0.913 0.867
NAC078
M07226_2.00
Arabidopsis thaliana
TTDCTTGNDNNDCAAG

CTTGHNNHNCAAGHAA
Dap-seq
OMalley et al.(2016)
NAC2_colamp_a
0.913 0.867
NAC078
M07227_2.00
Arabidopsis thaliana
DTTWCTTGNNNNRCAAG

CTTGYNNNNCAAGWAAH
Dap-seq
OMalley et al.(2016)
NAC2_col_v3a
0.913 0.867
NAC078
M11083_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC078_Q2
0.913 0.867
NAC053
M07202_2.00
Arabidopsis thaliana
TTWCTTGNNNVRCAAG

CTTGYBNNNCAAGWAA
Dap-seq
OMalley et al.(2016)
ANAC053_colamp_a
0.899 0.858
NAC053
M07203_2.00
Arabidopsis thaliana
TTWCTTGNNNVRCAAGH

DCTTGYBNNNCAAGWAA
Dap-seq
OMalley et al.(2016)
ANAC053_col
0.899 0.858
NAC053
M11079_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AT3G10500_Q2
0.899 0.858
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY18860 NAC/NAM 10 135
EOY18861 NAC/NAM 10 135

Links

Other NAC/NAM family TFs
Other Theobroma cacao TFs

Invalid Input OrderBy

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action